Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq615 96.9 5e-15 >seq615 Length=217977 Score = 96.9 bits (106), Expect = 5e-15 Identities = 318/483 (66%), Gaps = 30/483 (6%) Strand=Plus/Minus Query 104104 AATAATGAAGAAAAACAATATTTAAATTT-ATTAGAAAAAGTTCTTTTTCAAGGCGAAGA 104162 ||| | |||||| ||||||||||||||| |||||||||| | | |||| ||| Sbjct 40116 AATGAAGAAGAATTACAATATTTAAATTTAATTAGAAAAA-TAATAAAAGAAGGTGAATT 40058 Query 104163 TCGTGACGATAGAACAGGAATTGGAACTAAAAATGTATTTGG---AGAACAATTAAAATT 104219 | | ||||||||||| | ||||||| | ||||||| | | | |||| ||| Sbjct 40057 AAGAAATGATAGAACAGGTACTGGAACTCGAGCAATATTTGGTCCAAATCCCTTAAGATT 39998 Query 104220 TAATTTAAGAACATC-TTTTCCGTTACTAACTACaaaaaaaGTTTTTTGGAAAGGAGTTG 104278 | ||| || | | |||||| ||| |||| |||||||| ||||||| | ||| || | Sbjct 39997 CTCTCTAA-AAGACCATTTTCCATTATTAACAACAAAAAAGGTTTTTTTCAGAGGTGTAG 39939 Query 104279 TAGAAGAACTCTTATGGTTTATTAGCGGGAGTACAGATGTTTCTGTATTAAATCAA--AA 104336 ||||||| | || |||||| | || || ||| |||| |||| ||||| || Sbjct 39938 CAGAAGAATTGTTTTGGTTTTTAAGAGGTGATACTGATGGAAAAATATT--ATCAAAGAA 39881 Query 104337 AGGAGTTAAAATTTGGAATAAAAATGCAGAATCGTTTTATACACAACAAAATCTTTTTaa 104396 |||| || | || ||| | |||| ||| | | | ||||| ||||| Sbjct 39880 AGGAATTCATATATGGGAAGGTAATG-GTTCCCGTGAATTTCTTGATAAAATTGGTTTAA 39822 Query 104397 aa----------aaaaTGATTTAGGACCTATTTATGGTTTTCAGTGGAGACATTATGGTG 104446 | || |||||||||||| || ||||||| || ||| | |||| ||||| Sbjct 39821 CAGATAGAGAGGAAGGTGATTTAGGACCAATATATGGTTGGCAATGGCGTCATTTTGGTG 39762 Query 104447 AAAATTATATTGGGTGCGATAATAAATAT---GGT---GGTATAGATCAACTCAAAAATA 104500 || ||| | | || ||| | ||| ||| || | ||||||||| || Sbjct 39761 CTAAATATGTAGATTGTCATACAGATTATACAGGTCAAGGAAAAGATCAACTTCGTGATG 39702 Query 104501 TTATT-ACAACAATTCAAAATGAACCTTGGGATAGAAGAATGATATTATTAGCTTGGAAC 104559 ||||| |||| |||| |||| | || ||||||||||| ||| | | ||||||||| Sbjct 39701 TTATTGACAA-AATTATAAATAATCCAACTGATAGAAGAATCATAATGTCAGCTTGGAAT 39643 Query 104560 CCA 104562 ||| Sbjct 39642 CCA 39640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 679805604901200