Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq748 102 6e-17 seq179 98.7 8e-16 seq172 98.7 8e-16 seq304 84.2 2e-11 >seq748 Length=202608 Score = 102 bits (112), Expect = 6e-17 Identities = 157/220 (71%), Gaps = 3/220 (1%) Strand=Plus/Minus Query 18112 TAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAAT 18171 |||| || | |||||| || |||||||||||||||||||| || | | || | || Sbjct 91183 TAAG-ACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCAT 91125 Query 18172 CTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTAT 18231 |||| |||||||| || ||| | ||||| | |||||| || || | |||||||||| Sbjct 91124 CTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTAT 91065 Query 18232 CGGCAATTTGTTGCTT-GACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATG 18290 | ||| | | |||| ||| | | ||| ||| ||| | || ||| | ||||| Sbjct 91064 CTTGAATCT-TAGCTTTGACATTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTGATA 91006 Query 18291 CTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTTA 18330 |||| || || || || || |||||||||||||| |||| Sbjct 91005 GTTTTACCAGTTAAAGTCTTAACAAAAATTTGCATCTTTA 90966 Score = 89.7 bits (98), Expect = 4e-13 Identities = 151/215 (70%), Gaps = 3/215 (1%) Strand=Plus/Minus Query 18112 TAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAAT 18171 |||| || | |||||| || |||||||||||||||||||| || | | || | || Sbjct 92095 TAAG-ACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCAT 92037 Query 18172 CTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTAT 18231 |||| |||||||| || ||| | ||||| | |||||| || || | |||||||||| Sbjct 92036 CTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTAT 91977 Query 18232 CGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATG 18290 | ||| | | || || || | | ||| ||| ||| | || ||| | ||||| Sbjct 91976 CTTGAATCT-TAGCTTTAACATTTTCAATAGTATCAGAAGATTCTACTTCTAAAGTGATA 91918 Query 18291 CTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 | || || || || || || |||||||||||||| Sbjct 91917 GTCTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 91883 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 18122 GTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTG 18181 |||||| || |||||||||||||||||||| || | | || | |||||| ||||| Sbjct 91402 GTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCTAATTG 91343 Query 18182 TTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTG 18241 ||| || ||| | ||||| | |||||| || || | ||||| ||||| ||| | Sbjct 91342 TTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATCTTGAATCT- 91284 Query 18242 TTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGG 18300 | || ||||| | | ||| || ||| | || ||| | || || |||| || | Sbjct 91283 TAGCTTTGACATTTTCAATGGTATCAGAAGATTCTACTTCTAAAGTAATAGTTTTACCAG 91224 Query 18301 TCAATGTTTTTACAAAAATTTGCAT 18325 | || || || |||||||||||||| Sbjct 91223 TTAAAGTCTTAACAAAAATTTGCAT 91199 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 18122 GTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTG 18181 |||||| || |||||||||||||||||||| || | | || | |||||| ||||| Sbjct 91630 GTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCTAATTG 91571 Query 18182 TTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTG 18241 ||| || ||| | ||||| | |||||| || || | ||||| ||||| ||| | Sbjct 91570 TTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATCTTGAATCT- 91512 Query 18242 TTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGG 18300 | || || || | | ||| ||| ||| | || ||| | ||||| | || || | Sbjct 91511 TAGCTTTAACATTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTGATAGTCTTACCAG 91452 Query 18301 TCAATGTTTTTACAAAAATTTGCAT 18325 | || || || |||||||||||||| Sbjct 91451 TTAAAGTCTTAACAAAAATTTGCAT 91427 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/215 (70%), Gaps = 3/215 (1%) Strand=Plus/Minus Query 18112 TAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAAT 18171 |||| || | |||||| || |||||||||||||||||||| || | | || | || Sbjct 91867 TAAG-ACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCAT 91809 Query 18172 CTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTAT 18231 |||| |||||||| || ||| | ||||| | |||||| || || | ||||| |||| Sbjct 91808 CTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTAT 91749 Query 18232 CGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATG 18290 | ||| | | || ||||| | | ||| || ||| | || ||| | || || Sbjct 91748 CTTGAATCT-TAGCTTTGACATTTTCAATGGTATCAGAAGATTCTACTTCTAAAGTAATA 91690 Query 18291 CTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| || || || || || |||||||||||||| Sbjct 91689 GTTTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 91655 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/215 (70%), Gaps = 3/215 (1%) Strand=Plus/Minus Query 18112 TAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAAT 18171 |||| || | ||| || || |||||||||||||||||||| || | | || | || Sbjct 92323 TAAG-ACTAAGTGGAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCAT 92265 Query 18172 CTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTAT 18231 |||| |||||||| || ||| | ||||| | |||||| || || | |||||||||| Sbjct 92264 CTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTAT 92205 Query 18232 CGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATG 18290 | ||| | | || || || | | ||| ||| ||| | || ||| | || || Sbjct 92204 CTTGAATCT-TAGCTTTAACATTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTAATA 92146 Query 18291 CTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| || || || || || |||||||||||||| Sbjct 92145 GTTTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 92111 >seq179 Length=111796 Score = 98.7 bits (108), Expect = 8e-16 Identities = 164/233 (70%), Gaps = 3/233 (1%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || |||| | ||| || | ||||| || |||||||||||||||||||| || | Sbjct 96348 CCACCACGTAAACGAAGAACAAGATGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 96407 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || || |||||| |||||||| || ||| |||| | | ||||||||| || Sbjct 96408 AGAGTACGACCATCTTCTAATTGTTTACCGGCAAAGATTAAACGTTGTTGATCTGGTGGA 96467 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | ||||||||||| ||| | | || ||||| | | ||| ||||||| | || Sbjct 96468 ATACCTTCCTTATCTTGAATCT-TAGCTTTGACATTTTCAATAGTGTCAGAAGATTCAAC 96526 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAAT-TTGCATTTTT 18329 ||| | ||| ||| | || || || | ||||| |||||||| || |||||| Sbjct 96527 TTCTAAGGTAATGGTCTTACCAGTGAGAGTTTTAACAAAAATCTTTTATTTTT 96579 >seq172 Length=114120 Score = 98.7 bits (108), Expect = 8e-16 Identities = 153/215 (71%), Gaps = 3/215 (1%) Strand=Plus/Minus Query 18112 TAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAAT 18171 |||| || | ||| ||||| |||||||||||||| || || || | | || | || Sbjct 114051 TAAG-ACTAAGTGGAGTGTAGATTCTTTTTGAATATTATAATCAGAAAGAGTACGTCCAT 113993 Query 18172 CTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTAT 18231 |||| ||||| || || ||| | ||||| | ||||||||| || | |||||||||| Sbjct 113992 CTTCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGATCTGGAGGAATACCTTCCTTAT 113933 Query 18232 CGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATG 18290 | ||||| | || ||||| | | ||| ||||||| | || ||| | |||||| Sbjct 113932 CTTGAATTT-TAGCTTTGACATTTTCAATAGTGTCAGAAGATTCTACTTCTAAGGTGATA 113874 Query 18291 CTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 | || || ||||| || ||||| || |||||||| Sbjct 113873 GTCTTACCAGTCAAGGTCTTTACGAAGATTTGCAT 113839 Score = 87.8 bits (96), Expect = 1e-12 Identities = 153/219 (70%), Gaps = 3/219 (1%) Strand=Plus/Minus Query 18112 TAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAAT 18171 |||| || | ||| ||||| |||||||||||||| || || || | | || | || Sbjct 112911 TAAG-ACTAAGTGGAGTGTAGATTCTTTTTGAATATTATAATCAGAAAGAGTACGTCCAT 112853 Query 18172 CTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTAT 18231 |||| ||||| || || ||| | ||||| | |||||| || || | |||||||| | Sbjct 112852 CTTCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGGTCTGGAGGAATTCCTTCCTTGT 112793 Query 18232 CGGCAATTTGTTGCTT-GACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATG 18290 | ||| | | |||| ||| | | ||| ||||||| | || ||| | |||||| Sbjct 112792 CTTGAATCT-TAGCTTTGACATTTTCAATAGTGTCAGAAGATTCTACTTCTAAGGTGATA 112734 Query 18291 CTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTT 18329 | || || || || || ||||| || |||||||||||| Sbjct 112733 GTCTTACCAGTTAAAGTCTTTACGAAGATTTGCATTTTT 112695 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/215 (70%), Gaps = 3/215 (1%) Strand=Plus/Minus Query 18112 TAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAAT 18171 |||| |||| || ||||| |||||||||||||| || || || | | || | || Sbjct 113139 TAAG-ACCAAATGGAGTGTAGATTCTTTTTGAATATTATAATCAGAAAGAGTACGTCCAT 113081 Query 18172 CTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTAT 18231 |||| ||||| || || ||| | ||||| | |||||| || || | |||||||| | Sbjct 113080 CTTCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGGTCTGGAGGAATACCTTCCTTGT 113021 Query 18232 CGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATG 18290 | ||| | | || ||||| | | ||| ||||||| | || ||| | |||||| Sbjct 113020 CTTGAATCT-TAGCTTTGACATTTTCAATAGTGTCAGAAGATTCTACTTCTAAGGTGATA 112962 Query 18291 CTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 | || || ||||| || ||||| || |||||||| Sbjct 112961 GTCTTACCAGTCAAGGTCTTTACGAAGATTTGCAT 112927 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/215 (70%), Gaps = 3/215 (1%) Strand=Plus/Minus Query 18112 TAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAAT 18171 |||| || | ||| ||||| |||||||||||||| || || || | | || | || Sbjct 113367 TAAG-ACTAAGTGGAGTGTAGATTCTTTTTGAATATTATAATCAGAAAGAGTACGTCCAT 113309 Query 18172 CTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTAT 18231 |||| ||||| || || ||| | ||||| | |||||| || || | |||||||||| Sbjct 113308 CTTCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTAT 113249 Query 18232 CGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATG 18290 | ||| | | || || || | | ||| ||||||| | || ||| | |||||| Sbjct 113248 CTTGAATCT-TAGCTTTAACGTTTTCAATAGTGTCAGAAGATTCTACTTCTAAGGTGATA 113190 Query 18291 CTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 | || || ||||| || ||||| || |||||||| Sbjct 113189 GTCTTACCAGTCAAAGTCTTTACGAAGATTTGCAT 113155 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/215 (70%), Gaps = 3/215 (1%) Strand=Plus/Minus Query 18112 TAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAAT 18171 |||| |||| || ||||| |||||||||||||| || || || | | || | || Sbjct 113595 TAAG-ACCAAATGGAGTGTAGATTCTTTTTGAATATTATAATCAGAAAGAGTACGTCCAT 113537 Query 18172 CTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTAT 18231 |||| ||||| || || ||| | ||||| | |||||| || || | |||||||| | Sbjct 113536 CTTCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGGTCTGGAGGAATACCTTCCTTGT 113477 Query 18232 CGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATG 18290 | ||| | | || ||||| | | ||| ||||||| | || ||| | |||||| Sbjct 113476 CTTGAATCT-TAGCTTTGACATTTTCAATAGTGTCAGAAGATTCTACTTCTAAGGTGATA 113418 Query 18291 CTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 | || || ||||| || ||||| || |||||||| Sbjct 113417 GTCTTACCAGTCAAGGTCTTTACGAAGATTTGCAT 113383 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/215 (70%), Gaps = 3/215 (1%) Strand=Plus/Minus Query 18112 TAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAAT 18171 |||| || | ||| ||||| |||||||||||||| || || || | | || | || Sbjct 113823 TAAG-ACTAAGTGGAGTGTAGATTCTTTTTGAATATTATAATCAGAAAGAGTACGTCCAT 113765 Query 18172 CTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTAT 18231 |||| ||||| || || ||| | ||||| | |||||| || || | |||||||||| Sbjct 113764 CTTCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTAT 113705 Query 18232 CGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATG 18290 | ||| | | || || || | | ||| ||||||| | || ||| | |||||| Sbjct 113704 CTTGAATCT-TAGCTTTAACGTTTTCAATAGTGTCAGAAGATTCTACTTCTAAGGTGATA 113646 Query 18291 CTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 | || || ||||| || ||||| || |||||||| Sbjct 113645 GTCTTACCAGTCAAAGTCTTTACGAAGATTTGCAT 113611 >seq304 Length=284809 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188 || ||||| ||||||||||||||||| | | || || |||||| ||||| || || Sbjct 189531 GTAGATTCCTTTTGAATGTTGTAGTCAGAAAGAGTACGACCATCTTCTAATTGCTTACCG 189590 Query 18189 GCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGC-TT 18247 || ||||||| | |||||| || || | ||||||||||| || | | || || Sbjct 189591 GCGAAGATAAGACGTTGTTGGTCTGGTGGGATACCTTCCTTATCTTGGATCT-TAGCTTT 189649 Query 18248 GACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGT 18307 ||| | | ||| |||||| || || |||| ||| ||| | || || || | || Sbjct 189650 GACATTTTCAATAGTGTCGGAGGATTCAACCTCAAGGGTAATGGTCTTACCCGTAAGGGT 189709 Query 18308 TTTTACAAAAATTTGCAT 18325 ||| ||||| |||||||| Sbjct 189710 TTTGACAAAGATTTGCAT 189727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379339214931075