Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq748 116 3e-21 seq172 116 3e-21 seq179 104 2e-17 seq304 96.9 3e-15 >seq748 Length=202608 Score = 116 bits (128), Expect = 3e-21 Identities = 152/208 (73%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||| ||||||||||| || |||||| | || || ||||| ||||| | || |||||| | Sbjct 90967 AAAGATGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATCACTTTAGAAGTTGAATC 91026 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 || || | | | |||| |||||| | || || |||||||| | || || || Sbjct 91027 TTCTGATACTATTGAAAATGTCAAAGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGA 91086 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATT 31367 ||| || ||||| || || ||||| ||||| || ||||| | | | ||| | |||| Sbjct 91087 CCAACAACGTCTTATTTTTGCTGGTAAACAATTAGAAGA-TGGACGTACTCTTTCTGATT 91145 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCA 31395 | ||||||||||||||||| |||||||| Sbjct 91146 ACAACATTCAAAAAGAATCTACTCTTCA 91173 Score = 100 bits (110), Expect = 3e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || |||||| | || || || || ||||| | || |||||| | || Sbjct 91427 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAGACTATCACTTTAGAAGTTGAATCTTCT 91486 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | | |||| || ||| | || || || ||||| | || || ||||| Sbjct 91487 GATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAAAGAAGGTATTCCACCAGACCAA 91546 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 || ||||| || || ||||| ||||| || ||||| | | | ||| | ||||| || Sbjct 91547 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGA-TGGACGTACTCTTTCTGATTACAA 91605 Query 31372 CATTCAAAAAGAATCGACTCTTCA 31395 ||||||||||||||| |||||||| Sbjct 91606 CATTCAAAAAGAATCTACTCTTCA 91629 Score = 100 bits (110), Expect = 3e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || |||||| | || || || || ||||| | || || ||| | || Sbjct 91883 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAGACTATCACTTTAGAAGTAGAATCTTCT 91942 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | | |||| || ||| | || || |||||||| | || || ||||| Sbjct 91943 GATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGACCAA 92002 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 || ||||| || || ||||| ||||| || ||||| | | | ||| | ||||| || Sbjct 92003 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGA-TGGACGTACTCTTTCTGATTACAA 92061 Query 31372 CATTCAAAAAGAATCGACTCTTCA 31395 ||||||||||||||| |||||||| Sbjct 92062 CATTCAAAAAGAATCTACTCTTCA 92085 Score = 100 bits (110), Expect = 3e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || |||||| | || || ||||| || || | || |||||| | || Sbjct 92111 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATTACTTTAGAAGTTGAATCTTCT 92170 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | | |||| || ||| | || || |||||||| | || || ||||| Sbjct 92171 GATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGACCAA 92230 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 || ||||| || || ||||| ||||| || ||||| | | | ||| | ||||| || Sbjct 92231 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGA-TGGACGTACTCTTTCTGATTACAA 92289 Query 31372 CATTCAAAAAGAATCGACTCTTCA 31395 ||||||||||||||| ||||| || Sbjct 92290 CATTCAAAAAGAATCTACTCTCCA 92313 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || |||||| | || || ||||| || || | || || ||| | || Sbjct 91199 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATTACTTTAGAAGTAGAATCTTCT 91258 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | |||| |||||| | || || || ||||| | || || ||||| Sbjct 91259 GATACCATTGAAAATGTCAAAGCTAAGATTCAAGATAAAGAAGGTATTCCACCAGACCAA 91318 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 || ||||| || || ||||| ||||| || ||||| | | | ||| | ||||| || Sbjct 91319 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGA-TGGACGTACTCTTTCTGATTACAA 91377 Query 31372 CATTCAAAAAGAATCGACTCTTCA 31395 ||||||||||||||| |||||||| Sbjct 91378 CATTCAAAAAGAATCTACTCTTCA 91401 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || |||||| | || || ||||| || || | || || ||| | || Sbjct 91655 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATTACTTTAGAAGTAGAATCTTCT 91714 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | |||| |||||| | || || || ||||| | || || ||||| Sbjct 91715 GATACCATTGAAAATGTCAAAGCTAAGATTCAAGATAAAGAAGGTATTCCACCAGACCAA 91774 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 || ||||| || || ||||| ||||| || ||||| | | | ||| | ||||| || Sbjct 91775 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGA-TGGACGTACTCTTTCTGATTACAA 91833 Query 31372 CATTCAAAAAGAATCGACTCTTCA 31395 ||||||||||||||| |||||||| Sbjct 91834 CATTCAAAAAGAATCTACTCTTCA 91857 Score = 91.5 bits (100), Expect = 1e-13 Identities = 145/204 (71%), Gaps = 3/204 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || |||||| | || || ||||| || || | || |||||| | || Sbjct 92339 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATTACTTTAGAAGTTGAATCTTCT 92398 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | | |||| || ||| | || || || ||||| | || || ||||| Sbjct 92399 GATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAA-GAAGGTATTCCACCAGACCAA 92457 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 || ||||| || || ||||| ||||| || ||||| | | | ||| | ||||| || Sbjct 92458 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGA-TGGACGTACTCTTTCTGATTACAA 92516 Query 31372 CATTCAAAAAGAATCGACTCTTCA 31395 ||||||||||||||| ||||| || Sbjct 92517 CATTCAAAAAGAATCTACTCTCCA 92540 >seq172 Length=114120 Score = 116 bits (128), Expect = 3e-21 Identities = 157/215 (73%), Gaps = 3/215 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||||||||| |||| || || || |||||| | || || ||| | || Sbjct 112927 ATGCAAATCTTCGTAAAGACCTTGACTGGTAAGACTATCACCTTAGAAGTAGAATCTTCT 112986 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | |||| |||||| | || ||||||||||| | || || ||||| Sbjct 112987 GACACTATTGAAAATGTCAAAGCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 113046 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 || ||||| || || ||||| || || || ||||| | | | ||| | |||||||| Sbjct 113047 CAACGTCTTATTTTTGCTGGTAAGCAATTAGAAGA-TGGACGTACTCTTTCTGATTATAA 113105 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTA 31406 |||||||||||||| || || ||| |||| |||| Sbjct 113106 TATTCAAAAAGAATCTACACTCCATTTGGT-CTTA 113139 Score = 116 bits (128), Expect = 3e-21 Identities = 157/215 (73%), Gaps = 3/215 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||||||||| |||| || || || |||||| | || || ||| | || Sbjct 113383 ATGCAAATCTTCGTAAAGACCTTGACTGGTAAGACTATCACCTTAGAAGTAGAATCTTCT 113442 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | |||| |||||| | || ||||||||||| | || || ||||| Sbjct 113443 GACACTATTGAAAATGTCAAAGCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 113502 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 || ||||| || || ||||| || || || ||||| | | | ||| | |||||||| Sbjct 113503 CAACGTCTTATTTTTGCTGGTAAGCAATTAGAAGA-TGGACGTACTCTTTCTGATTATAA 113561 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTA 31406 |||||||||||||| || || ||| |||| |||| Sbjct 113562 TATTCAAAAAGAATCTACACTCCATTTGGT-CTTA 113595 Score = 111 bits (122), Expect = 1e-19 Identities = 151/208 (73%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||| |||||||| |||||||||||| | || || || || |||||| | || || ||| | Sbjct 112695 AAAAATGCAAATCTTCGTAAAGACTTTAACTGGTAAGACTATCACCTTAGAAGTAGAATC 112754 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 || |||| | | |||| |||||| | || ||||||||||| | || || || Sbjct 112755 TTCTGACACTATTGAAAATGTCAAAGCTAAGATTCAAGACAAGGAAGGAATTCCTCCAGA 112814 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATT 31367 ||| || ||||| || || ||||| || || || ||||| | | | ||| | |||| Sbjct 112815 CCAACAACGTCTTATTTTTGCTGGTAAGCAATTAGAAGA-TGGACGTACTCTTTCTGATT 112873 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCA 31395 |||| |||||||||||||| || || || Sbjct 112874 ATAATATTCAAAAAGAATCTACACTCCA 112901 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| |||||||||||| |||| || || || |||||| | || || ||| | || Sbjct 113155 ATGCAAATCTTCGTAAAGACTTTGACTGGTAAGACTATCACCTTAGAAGTAGAATCTTCT 113214 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | |||| || ||| | || || |||||||| | || || ||||| Sbjct 113215 GACACTATTGAAAACGTTAAAGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGACCAA 113274 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 || ||||| || || ||||| || || || ||||| | | | ||| | |||||||| Sbjct 113275 CAACGTCTTATTTTTGCTGGTAAGCAATTAGAAGA-TGGACGTACTCTTTCTGATTATAA 113333 Query 31372 CATTCAAAAAGAATCGACTCTTCA 31395 |||||||||||||| || || || Sbjct 113334 TATTCAAAAAGAATCTACACTCCA 113357 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| |||||||||||| |||| || || || |||||| | || || ||| | || Sbjct 113611 ATGCAAATCTTCGTAAAGACTTTGACTGGTAAGACTATCACCTTAGAAGTAGAATCTTCT 113670 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | |||| || ||| | || || |||||||| | || || ||||| Sbjct 113671 GACACTATTGAAAACGTTAAAGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGACCAA 113730 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 || ||||| || || ||||| || || || ||||| | | | ||| | |||||||| Sbjct 113731 CAACGTCTTATTTTTGCTGGTAAGCAATTAGAAGA-TGGACGTACTCTTTCTGATTATAA 113789 Query 31372 CATTCAAAAAGAATCGACTCTTCA 31395 |||||||||||||| || || || Sbjct 113790 TATTCAAAAAGAATCTACACTCCA 113813 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||||||||| |||| || || || |||||| | || || ||| | || Sbjct 113839 ATGCAAATCTTCGTAAAGACCTTGACTGGTAAGACTATCACCTTAGAAGTAGAATCTTCT 113898 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | |||| |||||| | ||| || |||||||| | || || || || Sbjct 113899 GACACTATTGAAAATGTCAAAGCTAAAATTCAAGATAAGGAAGGTATTCCTCCAGATCAA 113958 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 || ||||| || || ||||| || || || ||||| | | | ||| | |||||||| Sbjct 113959 CAACGTCTTATTTTTGCTGGTAAGCAATTAGAAGA-TGGACGTACTCTTTCTGATTATAA 114017 Query 31372 CATTCAAAAAGAATCGACTCTTCA 31395 |||||||||||||| || || || Sbjct 114018 TATTCAAAAAGAATCTACACTCCA 114041 >seq179 Length=111796 Score = 104 bits (114), Expect = 2e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 31199 ATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGT 31258 ||||| || || ||||| || || || || || ||| | || |||||| | || |||| | Sbjct 96568 ATTTTTGTTAAAACTCTCACTGGTAAGACCATTACCTTAGAAGTTGAATCTTCTGACACT 96509 Query 31259 GTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGT 31318 | |||| |||||| | || || |||||||| | || || || || || ||| Sbjct 96508 ATTGAAAATGTCAAAGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGATCAACAACGT 96449 Query 31319 CTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAA 31378 |||| || || || ||||| || ||||| | ||| | ||||| ||||||||| Sbjct 96448 TTAATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAACATTCAA 96389 Query 31379 AAAGAATCGACTCTTCATCTGGTACTT 31405 |||||||| ||||||||||| || ||| Sbjct 96388 AAAGAATCTACTCTTCATCTTGTTCTT 96362 >seq304 Length=284809 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || || || || || || || || || ||| | || |||||| | ||| Sbjct 189727 ATGCAAATCTTTGTCAAAACCCTTACGGGTAAGACCATTACCCTTGAGGTTGAATCCTCC 189668 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | |||| |||||| | || || |||||||| | || || ||||| Sbjct 189667 GACACTATTGAAAATGTCAAAGCTAAGATCCAAGATAAGGAAGGTATCCCACCAGACCAA 189608 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||||| || ||||| || || || || ||||| | ||| | || || ||| Sbjct 189607 CAACGTCTTATCTTCGCCGGTAAGCAATTAGAAGATGGTCGTACTCTTTCTGACTACAAC 189548 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 |||||||| ||||| ||| | ||||| || ||| Sbjct 189547 ATTCAAAAGGAATCTACTTTACATCTTGTCCTT 189515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445760632897200