Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq172 116 4e-21 seq748 104 2e-17 >seq172 Length=114120 Score = 116 bits (128), Expect = 4e-21 Identities = 167/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| || |||||||| | ||||| ||||||||||| |||||||| Sbjct 114065 CCACCACGAAGACGTAAGACTAAGTGGAGTGTAGATTCTTTTTGAATATTATAATCAGAA 114006 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | || | || | ||||| | || ||||||||| | || |||||||| ||||| ||||| Sbjct 114005 AGAGTACGTCCA-TCTTCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGATCTGGAGG 113947 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 || ||||| || || ||| |||| | ||| | | ||| | ||||| | | || | Sbjct 113946 AATACCTTCCTTATC-TTGAATTTTAGCTTTGACATTTTCAATAGTGTCAGAAGATTCTA 113888 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 | || | ||| | ||||| || ||||| || |||||||| ||||||||| Sbjct 113887 CTTCTAAGGTGATAGTCTTACCAGTCAAGGTCTTTACGAAGATTTGCATA 113838 Score = 107 bits (118), Expect = 2e-18 Identities = 165/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| || |||||||| | ||||| ||||||||||| |||||||| Sbjct 113381 CCACCACGAAGACGTAAGACTAAGTGGAGTGTAGATTCTTTTTGAATATTATAATCAGAA 113322 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | || | || | ||||| | || ||||||||| | || |||||||| || || || || Sbjct 113321 AGAGTACGTCCA-TCTTCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGG 113263 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCA 139715 || ||||| || || ||| | || | |||| | | ||| | ||||| | | || | Sbjct 113262 AATACCTTCCTTATC-TTGAATCTTAGCTTTAACGTTTTCAATAGTGTCAGAAGATTCTA 113204 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 | || | ||| | ||||| || ||||| || |||||||| ||||||||| Sbjct 113203 CTTCTAAGGTGATAGTCTTACCAGTCAAAGTCTTTACGAAGATTTGCATA 113154 Score = 107 bits (118), Expect = 2e-18 Identities = 165/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| || |||||||| | ||||| ||||||||||| |||||||| Sbjct 113837 CCACCACGAAGACGTAAGACTAAGTGGAGTGTAGATTCTTTTTGAATATTATAATCAGAA 113778 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | || | || | ||||| | || ||||||||| | || |||||||| || || || || Sbjct 113777 AGAGTACGTCCA-TCTTCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGG 113719 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCA 139715 || ||||| || || ||| | || | |||| | | ||| | ||||| | | || | Sbjct 113718 AATACCTTCCTTATC-TTGAATCTTAGCTTTAACGTTTTCAATAGTGTCAGAAGATTCTA 113660 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 | || | ||| | ||||| || ||||| || |||||||| ||||||||| Sbjct 113659 CTTCTAAGGTGATAGTCTTACCAGTCAAAGTCTTTACGAAGATTTGCATA 113610 Score = 105 bits (116), Expect = 7e-18 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| || |||||||| | ||||| ||||||||||| |||||||| Sbjct 112925 CCACCACGAAGACGTAAGACTAAGTGGAGTGTAGATTCTTTTTGAATATTATAATCAGAA 112866 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | || | || | ||||| | || ||||||||| | || |||||||| || || ||||| Sbjct 112865 AGAGTACGTCCA-TCTTCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGGTCTGGAGG 112807 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 || ||||| ||||| ||| | || | ||| | | ||| | ||||| | | || | Sbjct 112806 AATTCCTTCCTTGTC-TTGAATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGATTCTA 112748 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 | || | ||| | ||||| || || || || |||||||| |||||||| Sbjct 112747 CTTCTAAGGTGATAGTCTTACCAGTTAAAGTCTTTACGAAGATTTGCAT 112699 Score = 104 bits (114), Expect = 2e-17 Identities = 164/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| || || || || | ||||| ||||||||||| |||||||| Sbjct 113153 CCACCACGAAGACGTAAGACCAAATGGAGTGTAGATTCTTTTTGAATATTATAATCAGAA 113094 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | || | || | ||||| | || ||||||||| | || |||||||| || || ||||| Sbjct 113093 AGAGTACGTCCA-TCTTCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGGTCTGGAGG 113035 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 || ||||| ||||| ||| | || | ||| | | ||| | ||||| | | || | Sbjct 113034 AATACCTTCCTTGTC-TTGAATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGATTCTA 112976 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 | || | ||| | ||||| || ||||| || |||||||| ||||||||| Sbjct 112975 CTTCTAAGGTGATAGTCTTACCAGTCAAGGTCTTTACGAAGATTTGCATA 112926 Score = 104 bits (114), Expect = 2e-17 Identities = 164/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| || || || || | ||||| ||||||||||| |||||||| Sbjct 113609 CCACCACGAAGACGTAAGACCAAATGGAGTGTAGATTCTTTTTGAATATTATAATCAGAA 113550 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | || | || | ||||| | || ||||||||| | || |||||||| || || ||||| Sbjct 113549 AGAGTACGTCCA-TCTTCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGGTCTGGAGG 113491 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 || ||||| ||||| ||| | || | ||| | | ||| | ||||| | | || | Sbjct 113490 AATACCTTCCTTGTC-TTGAATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGATTCTA 113432 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 | || | ||| | ||||| || ||||| || |||||||| ||||||||| Sbjct 113431 CTTCTAAGGTGATAGTCTTACCAGTCAAGGTCTTTACGAAGATTTGCATA 113382 >seq748 Length=202608 Score = 104 bits (114), Expect = 2e-17 Identities = 164/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| ||||||||||||| ||||| |||||||||||||| ||||| Sbjct 91653 CCACCACGAAGACGTAAAACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 91594 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | || | || | ||||| | |||||||||||| | || |||||||| || || || || Sbjct 91593 AGAGTACGTCCA-TCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGG 91535 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCA 139715 || |||||||| || ||| | || | |||| | | ||| | || || | | || | Sbjct 91534 AATACCTTCTTTATC-TTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCAA 91476 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 | || | || | ||||| || || || || || || || ||||||||| Sbjct 91475 CTTCTAAAGTGATAGTCTTACCAGTTAAAGTCTTAACAAAAATTTGCATA 91426 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| ||||||||||||| ||||| |||||||||||||| ||||| Sbjct 91425 CCACCACGAAGACGTAAAACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 91366 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | || | || | ||||| | |||||||||||| | || |||||||| || || || || Sbjct 91365 AGAGTACGTCCA-TCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGG 91307 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 || |||||||| || ||| | || | ||| | | ||| | || || | | || | Sbjct 91306 AATACCTTCTTTATC-TTGAATCTTAGCTTTGACATTTTCAATGGTATCAGAAGATTCTA 91248 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 | || | || | || || || || || || || || || ||||||||| Sbjct 91247 CTTCTAAAGTAATAGTTTTACCAGTTAAAGTCTTAACAAAAATTTGCATA 91198 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| || |||||||||| ||||| |||||||||||||| ||||| Sbjct 92109 CCACCACGAAGACGTAAGACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 92050 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | || | || | ||||| | |||||||||||| | || |||||||| || || || || Sbjct 92049 AGAGTACGTCCA-TCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGG 91991 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCA 139715 || ||||| || || ||| | || | |||| | | ||| | || || | | || | Sbjct 91990 AATACCTTCCTTATC-TTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCTA 91932 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 | || | || | ||||| || || || || || || || ||||||||| Sbjct 91931 CTTCTAAAGTGATAGTCTTACCAGTTAAAGTCTTAACAAAAATTTGCATA 91882 Score = 89.7 bits (98), Expect = 5e-13 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| || |||||||||| ||||| |||||||||||||| ||||| Sbjct 91881 CCACCACGAAGACGTAAGACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 91822 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | || | || | ||||| | |||||||||||| | || |||||||| || || || || Sbjct 91821 AGAGTACGTCCA-TCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGG 91763 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 || |||||||| || ||| | || | ||| | | ||| | || || | | || | Sbjct 91762 AATACCTTCTTTATC-TTGAATCTTAGCTTTGACATTTTCAATGGTATCAGAAGATTCTA 91704 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 | || | || | || || || || || || || || || ||||||||| Sbjct 91703 CTTCTAAAGTAATAGTTTTACCAGTTAAAGTCTTAACAAAAATTTGCATA 91654 Score = 86.0 bits (94), Expect = 6e-12 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| || |||||||| | ||||| |||||||||||||| ||||| Sbjct 92337 CCACCACGAAGACGTAAGACTAAGTGGAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 92278 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | || | || | ||||| | |||||||||||| | || |||||||| || || || || Sbjct 92277 AGAGTACGTCCA-TCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGG 92219 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCA 139715 || ||||| || || ||| | || | |||| | | ||| | || || | | || | Sbjct 92218 AATACCTTCCTTATC-TTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCAA 92160 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 | || | || | || || || || || || || || || ||||||||| Sbjct 92159 CTTCTAAAGTAATAGTTTTACCAGTTAAAGTCTTAACAAAAATTTGCATA 92110 Score = 86.0 bits (94), Expect = 6e-12 Identities = 161/230 (70%), Gaps = 5/230 (2%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| ||||||||||| | ||||| |||||||||||||| ||||| Sbjct 92564 CCACCACGAAGACGTAAAACTAAGTGGAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 92505 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | || | || | ||||| | |||||||||||| | || |||||||| || || || || Sbjct 92504 AGAGTACGTCCA-TCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGG 92446 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCA 139715 || ||||| || || ||| | || | |||| | | ||| | || || | | || | Sbjct 92445 AATACCTTC-TTATC-TTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCAA 92388 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 | || | || | || || || || || || || || || ||||||||| Sbjct 92387 CTTCTAAAGTAATAGTTTTACCAGTTAAAGTCTTAACAAAAATTTGCATA 92338 Score = 84.2 bits (92), Expect = 2e-11 Identities = 101/135 (75%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| || |||||||||| ||||| |||||||||||||| ||||| Sbjct 91197 CCACCACGAAGACGTAAGACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 91138 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | || | || | ||||| | |||||||||||| | || |||||||| || || || || Sbjct 91137 AGAGTACGTCCA-TCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGG 91079 Query 139657 TATGCCTTCTTTGTC 139671 || ||||| || || Sbjct 91078 AATACCTTCCTTATC 91064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496057582172000