Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq748 104 2e-17 seq172 89.7 4e-13 >seq748 Length=202608 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| || | ||| || || || | ||| || ||||| | |||||||| || Sbjct 91425 CCACCACGAAGACGTAAAACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 91366 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | |||||| | || || |||||||| || |||||||| | || ||||| || | || Sbjct 91365 AGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGA 91306 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||||||| || ||| ||||||| | ||| || || || || || Sbjct 91305 ATACCTTCTTTATCTTGAATCTTAGCTTTGACATTTTCAATGGTATCAGAAGATTCTACT 91246 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 |||| || |||||||| || |||| ||| || |||||||||||||| Sbjct 91245 TCTAAAGTAATAGTTTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 91199 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| || | ||| || || || | ||| || ||||| | |||||||| || Sbjct 91881 CCACCACGAAGACGTAAGACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 91822 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | |||||| | || || |||||||| || |||||||| | || ||||| || | || Sbjct 91821 AGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGA 91762 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||||||| || ||| ||||||| | ||| || || || || || Sbjct 91761 ATACCTTCTTTATCTTGAATCTTAGCTTTGACATTTTCAATGGTATCAGAAGATTCTACT 91702 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 |||| || |||||||| || |||| ||| || |||||||||||||| Sbjct 91701 TCTAAAGTAATAGTTTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 91655 Score = 100 bits (110), Expect = 2e-16 Identities = 170/244 (70%), Gaps = 3/244 (1%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| || | ||| || || || | ||| || ||||| | |||||||| || Sbjct 91197 CCACCACGAAGACGTAAGACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 91138 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | |||||| | || || |||||||| || |||||||| | || ||||| || | || Sbjct 91137 AGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGA 91078 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | |||||| || || ||| ||||||| | ||| || || || || || Sbjct 91077 ATACCTTCCTTATCTTGAATCTTAGCTTTGACATTTTCAATAGTATCAGAAGATTCAACT 91018 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT-TTTCTTAATTTT 43121 |||| || |||||||| || |||| ||| || |||||||||||||| ||| || ||| Sbjct 91017 TCTAAAGTGATAGTTTTACCAGTTAAAGTCTTAACAAAAATTTGCATCTTTACTA--TTT 90960 Query 43122 ATTT 43125 |||| Sbjct 90959 ATTT 90956 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| || | ||| || || |||| ||| || ||||| | |||||||| || Sbjct 92337 CCACCACGAAGACGTAAGACTAAGTGGAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 92278 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | |||||| | || || |||||||| || |||||||| | || ||||| || | || Sbjct 92277 AGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGA 92218 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | |||||| || || ||| |||| || | ||| || || || || || Sbjct 92217 ATACCTTCCTTATCTTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCAACT 92158 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 |||| || |||||||| || |||| ||| || |||||||||||||| Sbjct 92157 TCTAAAGTAATAGTTTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 92111 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| || | ||| || || || | ||| || ||||| | |||||||| || Sbjct 91653 CCACCACGAAGACGTAAAACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 91594 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | |||||| | || || |||||||| || |||||||| | || ||||| || | || Sbjct 91593 AGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGA 91534 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||||||| || ||| |||| || | ||| || || || || || Sbjct 91533 ATACCTTCTTTATCTTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCAACT 91474 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 |||| || ||||| || || |||| ||| || |||||||||||||| Sbjct 91473 TCTAAAGTGATAGTCTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 91427 Score = 95.1 bits (104), Expect = 9e-15 Identities = 158/227 (70%), Gaps = 1/227 (0%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| || | ||| || || |||| ||| || ||||| | |||||||| || Sbjct 92564 CCACCACGAAGACGTAAAACTAAGTGGAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 92505 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | |||||| | || || |||||||| || |||||||| | || ||||| || | || Sbjct 92504 AGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGA 92445 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | |||||||| | | ||| |||| || | ||| || || || || || Sbjct 92444 ATACCTTCTTAT-CTTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCAACT 92386 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 |||| || |||||||| || |||| ||| || |||||||||||||| Sbjct 92385 TCTAAAGTAATAGTTTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 92339 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| || | ||| || || || | ||| || ||||| | |||||||| || Sbjct 92109 CCACCACGAAGACGTAAGACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 92050 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | |||||| | || || |||||||| || |||||||| | || ||||| || | || Sbjct 92049 AGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGA 91990 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | |||||| || || ||| |||| || | ||| || || || || || Sbjct 91989 ATACCTTCCTTATCTTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCTACT 91930 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 |||| || ||||| || || |||| ||| || |||||||||||||| Sbjct 91929 TCTAAAGTGATAGTCTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 91883 >seq172 Length=114120 Score = 89.7 bits (98), Expect = 4e-13 Identities = 162/237 (68%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| || | ||| || || |||| || || ||||| | ||| ||||| || Sbjct 112925 CCACCACGAAGACGTAAGACTAAGTGGAGTGTAGATTCTTTTTGAATATTATAATCAGAA 112866 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | |||||| | || || ||||| || || |||||||| | || ||||| || | || Sbjct 112865 AGAGTACGTCCATCTTCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGGTCTGGAGGA 112806 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||| || || ||| ||||||| | ||| ||||| || || || Sbjct 112805 ATTCCTTCCTTGTCTTGAATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGATTCTACT 112746 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTTCTTAATT 43119 |||| || ||||| || || |||| ||| || || || ||||||||||| || ||| Sbjct 112745 TCTAAGGTGATAGTCTTACCAGTTAAAGTCTTTACGAAGATTTGCATTTTTTTTATT 112689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381364789380030