Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq172 127 2e-24 seq748 118 1e-21 seq179 96.9 4e-15 >seq172 Length=114120 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || | ||| || ||||| || | ||||||||||||||| || || ||||| Sbjct 114065 CCACCACGAAGACGTAAGACTAAGTGGAGTGTAGATTCTTTTTGAATATTATAATCAGAA 114006 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | || | || | ||||| | ||| ||||||||| | || |||||||| ||||| ||||| Sbjct 114005 AGAGTACGTCCA-TCTTCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGATCTGGAGG 113947 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || ||||| || || |||||| ||| | | ||| | ||||| | | |||||| Sbjct 113946 AATACCTTCCTTATCTTGAATTTTAGCTTTGACATTTTCAATAGTGTCAGAAGATTCTAC 113887 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 ||| | || | ||||| || ||||| || |||||||| ||||||||| Sbjct 113886 TTCTAAGGTGATAGTCTTACCAGTCAAGGTCTTTACGAAGATTTGCATA 113838 Score = 122 bits (134), Expect = 9e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || | ||| || || ||||| | ||||||||||||||| || || ||||| Sbjct 113153 CCACCACGAAGACGTAAGACCAAATGGAGTGTAGATTCTTTTTGAATATTATAATCAGAA 113094 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | || | || | ||||| | ||| ||||||||| | || |||||||| || || ||||| Sbjct 113093 AGAGTACGTCCA-TCTTCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGGTCTGGAGG 113035 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || ||||| ||||| ||| || ||| | | ||| | ||||| | | |||||| Sbjct 113034 AATACCTTCCTTGTCTTGAATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGATTCTAC 112975 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 ||| | || | ||||| || ||||| || |||||||| ||||||||| Sbjct 112974 TTCTAAGGTGATAGTCTTACCAGTCAAGGTCTTTACGAAGATTTGCATA 112926 Score = 122 bits (134), Expect = 9e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || | ||| || || ||||| | ||||||||||||||| || || ||||| Sbjct 113609 CCACCACGAAGACGTAAGACCAAATGGAGTGTAGATTCTTTTTGAATATTATAATCAGAA 113550 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | || | || | ||||| | ||| ||||||||| | || |||||||| || || ||||| Sbjct 113549 AGAGTACGTCCA-TCTTCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGGTCTGGAGG 113491 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || ||||| ||||| ||| || ||| | | ||| | ||||| | | |||||| Sbjct 113490 AATACCTTCCTTGTCTTGAATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGATTCTAC 113431 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 ||| | || | ||||| || ||||| || |||||||| ||||||||| Sbjct 113430 TTCTAAGGTGATAGTCTTACCAGTCAAGGTCTTTACGAAGATTTGCATA 113382 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || | ||| || ||||| || | ||||||||||||||| || || ||||| Sbjct 112925 CCACCACGAAGACGTAAGACTAAGTGGAGTGTAGATTCTTTTTGAATATTATAATCAGAA 112866 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | || | || | ||||| | ||| ||||||||| | || |||||||| || || ||||| Sbjct 112865 AGAGTACGTCCA-TCTTCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGGTCTGGAGG 112807 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || ||||| ||||| ||| || ||| | | ||| | ||||| | | |||||| Sbjct 112806 AATTCCTTCCTTGTCTTGAATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGATTCTAC 112747 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||| | || | ||||| || || || || |||||||| |||||||| Sbjct 112746 TTCTAAGGTGATAGTCTTACCAGTTAAAGTCTTTACGAAGATTTGCAT 112699 Score = 113 bits (124), Expect = 5e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || | ||| || ||||| || | ||||||||||||||| || || ||||| Sbjct 113381 CCACCACGAAGACGTAAGACTAAGTGGAGTGTAGATTCTTTTTGAATATTATAATCAGAA 113322 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | || | || | ||||| | ||| ||||||||| | || |||||||| || || || || Sbjct 113321 AGAGTACGTCCA-TCTTCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGG 113263 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || ||||| || || ||| || ||| | | ||| | ||||| | | |||||| Sbjct 113262 AATACCTTCCTTATCTTGAATCTTAGCTTTAACGTTTTCAATAGTGTCAGAAGATTCTAC 113203 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 ||| | || | ||||| || ||||| || |||||||| ||||||||| Sbjct 113202 TTCTAAGGTGATAGTCTTACCAGTCAAAGTCTTTACGAAGATTTGCATA 113154 Score = 113 bits (124), Expect = 5e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || | ||| || ||||| || | ||||||||||||||| || || ||||| Sbjct 113837 CCACCACGAAGACGTAAGACTAAGTGGAGTGTAGATTCTTTTTGAATATTATAATCAGAA 113778 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | || | || | ||||| | ||| ||||||||| | || |||||||| || || || || Sbjct 113777 AGAGTACGTCCA-TCTTCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGG 113719 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || ||||| || || ||| || ||| | | ||| | ||||| | | |||||| Sbjct 113718 AATACCTTCCTTATCTTGAATCTTAGCTTTAACGTTTTCAATAGTGTCAGAAGATTCTAC 113659 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 ||| | || | ||||| || ||||| || |||||||| ||||||||| Sbjct 113658 TTCTAAGGTGATAGTCTTACCAGTCAAAGTCTTTACGAAGATTTGCATA 113610 >seq748 Length=202608 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || | ||| |||||||| |||| |||||||||||||| ||||||||||| Sbjct 91425 CCACCACGAAGACGTAAAACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 91366 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | || | || | ||||| | ||||||||||||| | || |||||||| || || || || Sbjct 91365 AGAGTACGTCCA-TCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGG 91307 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || |||||||| || ||| || ||| | | ||| | || || | | |||||| Sbjct 91306 AATACCTTCTTTATCTTGAATCTTAGCTTTGACATTTTCAATGGTATCAGAAGATTCTAC 91247 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 ||| | ||| | || || || || || || || || || ||||||||| Sbjct 91246 TTCTAAAGTAATAGTTTTACCAGTTAAAGTCTTAACAAAAATTTGCATA 91198 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || | ||| |||||||| |||| |||||||||||||| ||||||||||| Sbjct 91653 CCACCACGAAGACGTAAAACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 91594 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | || | || | ||||| | ||||||||||||| | || |||||||| || || || || Sbjct 91593 AGAGTACGTCCA-TCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGG 91535 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || |||||||| || ||| || ||| | | ||| | || || | | ||| || Sbjct 91534 AATACCTTCTTTATCTTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCAAC 91475 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 ||| | ||| | ||||| || || || || || || || ||||||||| Sbjct 91474 TTCTAAAGTGATAGTCTTACCAGTTAAAGTCTTAACAAAAATTTGCATA 91426 Score = 113 bits (124), Expect = 5e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || | ||| || ||||| |||| |||||||||||||| ||||||||||| Sbjct 91881 CCACCACGAAGACGTAAGACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 91822 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | || | || | ||||| | ||||||||||||| | || |||||||| || || || || Sbjct 91821 AGAGTACGTCCA-TCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGG 91763 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || |||||||| || ||| || ||| | | ||| | || || | | |||||| Sbjct 91762 AATACCTTCTTTATCTTGAATCTTAGCTTTGACATTTTCAATGGTATCAGAAGATTCTAC 91703 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 ||| | ||| | || || || || || || || || || ||||||||| Sbjct 91702 TTCTAAAGTAATAGTTTTACCAGTTAAAGTCTTAACAAAAATTTGCATA 91654 Score = 113 bits (124), Expect = 5e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || | ||| || ||||| |||| |||||||||||||| ||||||||||| Sbjct 92109 CCACCACGAAGACGTAAGACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 92050 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | || | || | ||||| | ||||||||||||| | || |||||||| || || || || Sbjct 92049 AGAGTACGTCCA-TCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGG 91991 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || ||||| || || ||| || ||| | | ||| | || || | | |||||| Sbjct 91990 AATACCTTCCTTATCTTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCTAC 91931 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 ||| | ||| | ||||| || || || || || || || ||||||||| Sbjct 91930 TTCTAAAGTGATAGTCTTACCAGTTAAAGTCTTAACAAAAATTTGCATA 91882 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || | ||| || ||||| |||| |||||||||||||| ||||||||||| Sbjct 91197 CCACCACGAAGACGTAAGACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 91138 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | || | || | ||||| | ||||||||||||| | || |||||||| || || || || Sbjct 91137 AGAGTACGTCCA-TCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGG 91079 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || ||||| || || ||| || ||| | | ||| | || || | | ||| || Sbjct 91078 AATACCTTCCTTATCTTGAATCTTAGCTTTGACATTTTCAATAGTATCAGAAGATTCAAC 91019 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||| | ||| | || || || || || || || || || |||||||| Sbjct 91018 TTCTAAAGTGATAGTTTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 90971 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || | ||| || ||||| || | |||||||||||||| ||||||||||| Sbjct 92337 CCACCACGAAGACGTAAGACTAAGTGGAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 92278 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | || | || | ||||| | ||||||||||||| | || |||||||| || || || || Sbjct 92277 AGAGTACGTCCA-TCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGG 92219 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || ||||| || || ||| || ||| | | ||| | || || | | ||| || Sbjct 92218 AATACCTTCCTTATCTTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCAAC 92159 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 ||| | ||| | || || || || || || || || || ||||||||| Sbjct 92158 TTCTAAAGTAATAGTTTTACCAGTTAAAGTCTTAACAAAAATTTGCATA 92110 Score = 100 bits (110), Expect = 3e-16 Identities = 162/229 (71%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || | ||| |||||||| || | |||||||||||||| ||||||||||| Sbjct 92564 CCACCACGAAGACGTAAAACTAAGTGGAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 92505 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | || | || | ||||| | ||||||||||||| | || |||||||| || || || || Sbjct 92504 AGAGTACGTCCA-TCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGG 92446 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || ||||| || || ||| || ||| | | ||| | || || | | ||| || Sbjct 92445 AATACCTTC-TTATCTTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCAAC 92387 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 ||| | ||| | || || || || || || || || || ||||||||| Sbjct 92386 TTCTAAAGTAATAGTTTTACCAGTTAAAGTCTTAACAAAAATTTGCATA 92338 >seq179 Length=111796 Score = 96.9 bits (106), Expect = 4e-15 Identities = 154/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || |||||||| | ||| | ||||| |||||||||||||| ||||||||||| Sbjct 96348 CCACCACGTAAACGAAGAACAAGATGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 96407 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | || | ||||| | ||||||||| ||| |||| | |||||| ||||| || || Sbjct 96408 AGAGTACGACCATCTTCTAATTGTTTACCGGCAAAGATTAAACGTTGTTGATCTGGTGGA 96467 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||| || || ||| || ||| | | ||| | ||||| | | ||| ||| Sbjct 96468 ATACCTTCCTTATCTTGAATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGATTCAACT 96527 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATAT 143178 || | || | ||||| || || | ||||| || || || Sbjct 96528 TCTAAGGTAATGGTCTTACCAGTGAGAGTTTTAACAAAAAT 96568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507007840501200