Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq748 111 1e-19 seq172 96.9 2e-15 >seq748 Length=202608 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 43931 TCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAAT 43990 ||||||||||| || ||||| | ||| |||| || |||||||| || ||||| Sbjct 91389 TCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAA 91330 Query 43991 ATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATA 44050 || | ||||| ||||| | || | ||||||||||||| ||| || |||||| | Sbjct 91329 ATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATCTTGAATCTTAGCTTTGACATTT 91270 Query 44051 GCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACA 44110 ||| ||||| | | || || || | ||||| |||||||| ||||||||||| ||| Sbjct 91269 TCAATGGTATCAGAAGATTCTACTTCTAAAGTAATAGTTTTACCAGTTAAAGTCTTAACA 91210 Query 44111 AATATTTGCAT 44121 || |||||||| Sbjct 91209 AAAATTTGCAT 91199 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 43931 TCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAAT 43990 ||||||||||| || ||||| | ||| |||| || |||||||| || ||||| Sbjct 91845 TCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAA 91786 Query 43991 ATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATA 44050 || | ||||| ||||| | || | ||||||||||||| ||| || |||||| | Sbjct 91785 ATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATCTTGAATCTTAGCTTTGACATTT 91726 Query 44051 GCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACA 44110 ||| ||||| | | || || || | ||||| |||||||| ||||||||||| ||| Sbjct 91725 TCAATGGTATCAGAAGATTCTACTTCTAAAGTAATAGTTTTACCAGTTAAAGTCTTAACA 91666 Query 44111 AATATTTGCAT 44121 || |||||||| Sbjct 91665 AAAATTTGCAT 91655 Score = 105 bits (116), Expect = 5e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 43931 TCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAAT 43990 ||||||||||| || ||||| | ||| |||| || |||||||| || ||||| Sbjct 91161 TCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAA 91102 Query 43991 ATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATA 44050 || | ||||| ||||| | || | |||||| |||||| ||| || |||||| | Sbjct 91101 ATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATCTTGAATCTTAGCTTTGACATTT 91042 Query 44051 GCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACA 44110 ||| |||||| | | || || || | || || |||||||| ||||||||||| ||| Sbjct 91041 TCAATAGTATCAGAAGATTCAACTTCTAAAGTGATAGTTTTACCAGTTAAAGTCTTAACA 90982 Query 44111 AATATTTGCAT 44121 || |||||||| Sbjct 90981 AAAATTTGCAT 90971 Score = 105 bits (116), Expect = 5e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 43931 TCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAAT 43990 ||||||||||| || ||||| | ||| |||| || |||||||| || ||||| Sbjct 92301 TCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAA 92242 Query 43991 ATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATA 44050 || | ||||| ||||| | || | |||||| |||||| ||| || ||| || | Sbjct 92241 ATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATCTTGAATCTTAGCTTTAACATTT 92182 Query 44051 GCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACA 44110 ||| |||||| | | || || || | ||||| |||||||| ||||||||||| ||| Sbjct 92181 TCAATAGTATCAGAAGATTCAACTTCTAAAGTAATAGTTTTACCAGTTAAAGTCTTAACA 92122 Query 44111 AATATTTGCAT 44121 || |||||||| Sbjct 92121 AAAATTTGCAT 92111 Score = 102 bits (112), Expect = 6e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 43931 TCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAAT 43990 ||||||||||| || ||||| | ||| |||| || |||||||| || ||||| Sbjct 91617 TCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAA 91558 Query 43991 ATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATA 44050 || | ||||| ||||| | || | ||||||||||||| ||| || ||| || | Sbjct 91557 ATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATCTTGAATCTTAGCTTTAACATTT 91498 Query 44051 GCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACA 44110 ||| |||||| | | || || || | || || || ||||| ||||||||||| ||| Sbjct 91497 TCAATAGTATCAGAAGATTCAACTTCTAAAGTGATAGTCTTACCAGTTAAAGTCTTAACA 91438 Query 44111 AATATTTGCAT 44121 || |||||||| Sbjct 91437 AAAATTTGCAT 91427 Score = 102 bits (112), Expect = 6e-17 Identities = 138/191 (72%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 43931 TCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAAT 43990 ||||||||||| || ||||| | ||| |||| || |||||||| || ||||| Sbjct 92528 TCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAA 92469 Query 43991 ATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATA 44050 || | ||||| ||||| | || | |||||||| |||| ||| || ||| || | Sbjct 92468 ATAAGACGTTGTTGGTCTGGTGGAATACCTTCTT-ATCTTGAATCTTAGCTTTAACATTT 92410 Query 44051 GCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACA 44110 ||| |||||| | | || || || | ||||| |||||||| ||||||||||| ||| Sbjct 92409 TCAATAGTATCAGAAGATTCAACTTCTAAAGTAATAGTTTTACCAGTTAAAGTCTTAACA 92350 Query 44111 AATATTTGCAT 44121 || |||||||| Sbjct 92349 AAAATTTGCAT 92339 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 43931 TCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAAT 43990 ||||||||||| || ||||| | ||| |||| || |||||||| || ||||| Sbjct 92073 TCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAA 92014 Query 43991 ATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATA 44050 || | ||||| ||||| | || | |||||| |||||| ||| || ||| || | Sbjct 92013 ATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATCTTGAATCTTAGCTTTAACATTT 91954 Query 44051 GCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACA 44110 ||| |||||| | | || || || | || || || ||||| ||||||||||| ||| Sbjct 91953 TCAATAGTATCAGAAGATTCTACTTCTAAAGTGATAGTCTTACCAGTTAAAGTCTTAACA 91894 Query 44111 AATATTTGCAT 44121 || |||||||| Sbjct 91893 AAAATTTGCAT 91883 >seq172 Length=114120 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 43909 TAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATC 43968 ||| |||||||| || || |||||||||||||||||||| | ||| |||| Sbjct 113139 TAAGACCAAATGGAGTGTAGATTCTTTTTGAATATTATAATCAGAAAGAGTACGTCCATC 113080 Query 43969 GTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATC 44028 || ||||| || || ||||| || | ||||| ||||| |||| | |||||| || || Sbjct 113079 TTCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGGTCTGGAGGAATACCTTCCTTGTC 113020 Query 44029 TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGT 44088 | ||| || |||||| | ||| ||| || | | || || || | || || || Sbjct 113019 TTGAATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGATTCTACTTCTAAGGTGATAGT 112960 Query 44089 TTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 ||||| || || ||||| || || |||||||| Sbjct 112959 CTTACCAGTCAAGGTCTTTACGAAGATTTGCAT 112927 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 43909 TAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATC 43968 ||| |||||||| || || |||||||||||||||||||| | ||| |||| Sbjct 113595 TAAGACCAAATGGAGTGTAGATTCTTTTTGAATATTATAATCAGAAAGAGTACGTCCATC 113536 Query 43969 GTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATC 44028 || ||||| || || ||||| || | ||||| ||||| |||| | |||||| || || Sbjct 113535 TTCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGGTCTGGAGGAATACCTTCCTTGTC 113476 Query 44029 TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGT 44088 | ||| || |||||| | ||| ||| || | | || || || | || || || Sbjct 113475 TTGAATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGATTCTACTTCTAAGGTGATAGT 113416 Query 44089 TTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 ||||| || || ||||| || || |||||||| Sbjct 113415 CTTACCAGTCAAGGTCTTTACGAAGATTTGCAT 113383 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 43931 TCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAAT 43990 |||||||||||||||||||| | ||| |||| || ||||| || || ||||| Sbjct 112889 TCTTTTTGAATATTATAATCAGAAAGAGTACGTCCATCTTCTAATTGCTTACCAGCAAAA 112830 Query 43991 ATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATA 44050 || | ||||| ||||| |||| | ||||| || ||| ||| || |||||| | Sbjct 112829 ATAAGACGTTGTTGGTCTGGAGGAATTCCTTCCTTGTCTTGAATCTTAGCTTTGACATTT 112770 Query 44051 GCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACA 44110 ||| ||| || | | || || || | || || || ||||| ||||||||||| || Sbjct 112769 TCAATAGTGTCAGAAGATTCTACTTCTAAGGTGATAGTCTTACCAGTTAAAGTCTTTACG 112710 Query 44111 AATATTTGCAT 44121 || |||||||| Sbjct 112709 AAGATTTGCAT 112699 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 43931 TCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAAT 43990 |||||||||||||||||||| | ||| |||| || ||||| || || ||||| Sbjct 114029 TCTTTTTGAATATTATAATCAGAAAGAGTACGTCCATCTTCTAATTGCTTACCAGCAAAA 113970 Query 43991 ATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATA 44050 || | ||||| || || |||| | |||||| |||||| |||||| |||||| | Sbjct 113969 ATAAGACGTTGTTGATCTGGAGGAATACCTTCCTTATCTTGAATTTTAGCTTTGACATTT 113910 Query 44051 GCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACA 44110 ||| ||| || | | || || || | || || || ||||| || || ||||| || Sbjct 113909 TCAATAGTGTCAGAAGATTCTACTTCTAAGGTGATAGTCTTACCAGTCAAGGTCTTTACG 113850 Query 44111 AATATTTGCAT 44121 || |||||||| Sbjct 113849 AAGATTTGCAT 113839 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 43931 TCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAAT 43990 |||||||||||||||||||| | ||| |||| || ||||| || || ||||| Sbjct 113345 TCTTTTTGAATATTATAATCAGAAAGAGTACGTCCATCTTCTAATTGCTTACCAGCAAAA 113286 Query 43991 ATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATA 44050 || | ||||| ||||| | || | |||||| |||||| ||| || ||| || | Sbjct 113285 ATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATCTTGAATCTTAGCTTTAACGTTT 113226 Query 44051 GCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACA 44110 ||| ||| || | | || || || | || || || ||||| || |||||||| || Sbjct 113225 TCAATAGTGTCAGAAGATTCTACTTCTAAGGTGATAGTCTTACCAGTCAAAGTCTTTACG 113166 Query 44111 AATATTTGCAT 44121 || |||||||| Sbjct 113165 AAGATTTGCAT 113155 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 43931 TCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAAT 43990 |||||||||||||||||||| | ||| |||| || ||||| || || ||||| Sbjct 113801 TCTTTTTGAATATTATAATCAGAAAGAGTACGTCCATCTTCTAATTGCTTACCAGCAAAA 113742 Query 43991 ATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATA 44050 || | ||||| ||||| | || | |||||| |||||| ||| || ||| || | Sbjct 113741 ATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATCTTGAATCTTAGCTTTAACGTTT 113682 Query 44051 GCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACA 44110 ||| ||| || | | || || || | || || || ||||| || |||||||| || Sbjct 113681 TCAATAGTGTCAGAAGATTCTACTTCTAAGGTGATAGTCTTACCAGTCAAAGTCTTTACG 113622 Query 44111 AATATTTGCAT 44121 || |||||||| Sbjct 113621 AAGATTTGCAT 113611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354773124813180