Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq101 136 5e-27 seq615 131 2e-25 seq191 84.2 3e-11 >seq101 Length=142099 Score = 136 bits (150), Expect = 5e-27 Identities = 213/300 (71%), Gaps = 6/300 (2%) Strand=Plus/Minus Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457 || |||||||| | || | ||||| || ||| ||||||| |||||||||| || Sbjct 43707 AAATTTGAAGATTTAGGTATTGGTGGTCTTGATAAAGAATTTAGCGCTATTTTCAGAAGA 43648 Query 164458 GCATTTGCTTCTAGATCAGTTCCTATCGAA-ATAATaaaaaaaTTAGGCTGTAAACATAT 164516 || ||||||||| | | |||| | | || | |||||||||| | ||||| Sbjct 43647 GCTTTTGCTTCTCG-TATTTTCCCACCATCTATTGTTGAAAAATTAGGTATTCAACATTG 43589 Query 164517 AAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCAT 164576 ||||| ||||||||| |||| || || ||| ||||| || ||||||||||| || Sbjct 43588 TAAAGGTATTTTATTATATGGTCCACCAGGTACTGGTAAGACTTTAATGGCTCGTCAAAT 43529 Query 164577 TGCTCAAGCTTTTAAA--TCGCGACCCGTTAAAATTGTTAATGGTCCTGAATTATTGAAC 164634 || | || |||| ||| || || | | ||||||||||||| ||| | || ||| Sbjct 43528 TGGTAAAATGCTTAATGCTCGTGAACCAATTA--TTGTTAATGGTCCAGAAATTTTAAAC 43471 Query 164635 AAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAAGAA 164694 |||||||| ||| |||| |||| ||| ||||||| || ||| || |||||| ||||| Sbjct 43470 AAATATGTTGGTCAGTCTGAAGAAAATATTAGAAAATTATTTGCTGAAGCTGAAAAAGAA 43411 >seq615 Length=217977 Score = 131 bits (144), Expect = 2e-25 Identities = 241/347 (69%), Gaps = 10/347 (3%) Strand=Plus/Plus Query 7062 TGGATTCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTAT 7121 |||||||||||| | ||||| || | ||||||| ||||||| ||| ||||||||| | Sbjct 39640 TGGATTCCAAGCTGACATTATGATTCTTCTATCAGTTGGATTA-TTTATAATTTTGTCAA 39698 Query 7122 AATTATTTGTAA-TTGATCTATACCCTGACCTTCATAATTAGTATGACAATTTATATAAT 7180 | || || ||||||| | || |||||| ||||| |||||||||| || ||| | Sbjct 39699 TAACATCACGAAGTTGATCTTTTCCTTGACCTGTATAATCTGTATGACAATCTACATATT 39758 Query 7181 TAGCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCTTCTTCACGAT 7240 |||| |||||||| | |||||| | ||||| || || |||||||||||||| || | || Sbjct 39759 TAGCACCAAAATGACGCCATTGCCAACCATATATTGGTCCTAAATCACCTTCCTCTCTAT 39818 Query 7241 GATTAAATCCTAATCGATTTA-AATTAGATT---TTGATCCATAAGCATCCCAAATATGT 7296 | || || ||| |||| | | ||| || |||| | | ||||| ||||| Sbjct 39819 CTGTTAAACC-AAT---TTTATCAAGAAATTCACGGGAACCATTACCTTCCCATATATGA 39874 Query 7297 ACAGAtttttttGATAAATTTAAAGAATTTGTAGATCCTTTAAGGAACCATAAAAGTTCT 7356 | ||| |||||||| || || ||| ||| | | ||||| || | |||| Sbjct 39875 ATTCCTTTCTTTGATAATATTTTTCCATCAGTATCACCTCTTAAAAACCAAAACAATTCT 39934 Query 7357 TCTACTATTCCACGCCAAAACATTCTTTTTGTAGTGAATAAAGGGAA 7403 ||| ||| || | |||| | ||||||| || ||||| || || Sbjct 39935 TCTGCTACACCTCTGAAAAAAACCTTTTTTGTTGTTAATAATGGAAA 39981 Score = 113 bits (124), Expect = 5e-20 Identities = 176/248 (71%), Gaps = 14/248 (6%) Strand=Plus/Plus Query 6806 TTAATTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTAT 6865 |||||||||||| || |||| || |||| ||||||||| | ||| || | || Sbjct 39263 TTAATTGTTCTTGTAATGCTTCAATGTGATTATTATAAATATGTGTATCACCCATATCAT 39322 Query 6866 GAATAAATTCACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCAT 6925 |||||||| || ||||| || ||| | |||||||||| | ||||||| |||| || Sbjct 39323 GAATAAATGTTCCAGGTTTAATTCCAATGACATGAGCAATTATACATGTTAACAATGAAT 39382 Query 6926 AAGAAGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGAT-AACATTGA 6984 || |||| |||||| || |||||||| || | ||| |||||||| | || | || Sbjct 39383 AACTTGCTATATTAAATGGAACACCTAAACCAACATCACAAGATCTTTGGTAAAGAATG- 39441 Query 6985 CAAGATAAAAT---AT-TGTCTAT--------AGCATAAAATTGACACAATACATGACAT 7032 ||||||||| | || ||| | | | || |||||||||| || | ||||||| Sbjct 39442 CAAGATAAACTTGGATCTGTTTCTGGATTTGAAACAAAAAATTGACAGAACATATGACAT 39501 Query 7033 GGAGGTAA 7040 || ||||| Sbjct 39502 GGTGGTAA 39509 >seq191 Length=109312 Score = 84.2 bits (92), Expect = 3e-11 Identities = 106/143 (74%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 19362 AAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGT-GGTATGATTTAT 19420 |||| ||||||||||||||| | | |||||| || || ||| ||||||| ||| Sbjct 90889 AAATGGGTGATAAGTTTGCTAGTAGACACGGTCAAAAGGGTAC-TGTCGGTATGACATAT 90947 Query 19421 CGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTTATTATTAACCCA 19480 ||| ||||||||||| |||||| || ||||| || ||| |||||||||| ||| Sbjct 90948 CGTACTGAAGATATGCCATTTACTGTTGAAGGTATCACACCAGATATTATTATTAATCCA 91007 Query 19481 CATGCTTTTCCAAGTCGAATGAC 19503 || ||| | ||| ||| ||||| Sbjct 91008 CACGCTATCCCATCTCGTATGAC 91030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595864290906000