Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq172 113 4e-20 seq748 100 3e-16 seq179 96.9 3e-15 seq304 95.1 1e-14 >seq172 Length=114120 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 26762 AAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGA 26821 ||| ||||||||| | || ||||| || |||||||| || | |||||| | ||| |||| Sbjct 112692 AAAAAAAATGCAAATCTTCGTAAAGACTTTAACTGGTAAGACTATCACCTTAGAAGTAGA 112751 Query 26822 ATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCC 26881 ||| ||||| || || | |||||| |||||| ||||| ||||| || ||||| Sbjct 112752 ATCTTCTGACACTATTGAAAATGTCAAAGCTAAGATTCAAGACAAGGAAGGAATTCCTCC 112811 Query 26882 CGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGA 26941 || |||||| | || |||| | || || ||| | ||||||| | | | || Sbjct 112812 AGACCAACAACGTCTTATTTTTGCTGGTAAGCAATTAGAAGATGGACGTACTCTTTCTGA 112871 Query 26942 CTATAACATTCAAAAAGAATCTACTATCCA 26971 ||||| ||||||||||||||||| |||| Sbjct 112872 TTATAATATTCAAAAAGAATCTACACTCCA 112901 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || ||||| || || ||||| || | |||||| | ||| ||||||| Sbjct 112927 ATGCAAATCTTCGTAAAGACCTTGACTGGTAAGACTATCACCTTAGAAGTAGAATCTTCT 112986 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | |||||| |||||| ||||| ||||| || ||||| || ||| Sbjct 112987 GACACTATTGAAAATGTCAAAGCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 113046 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | || |||| | || || ||| | ||||||| | | | || ||||| Sbjct 113047 CAACGTCTTATTTTTGCTGGTAAGCAATTAGAAGATGGACGTACTCTTTCTGATTATAAT 113106 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTC 26978 ||||||||||||||||| ||||| ||||| Sbjct 113107 ATTCAAAAAGAATCTACACTCCATTTGGTC 113136 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || ||||| || || ||||| || | |||||| | ||| ||||||| Sbjct 113383 ATGCAAATCTTCGTAAAGACCTTGACTGGTAAGACTATCACCTTAGAAGTAGAATCTTCT 113442 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | |||||| |||||| ||||| ||||| || ||||| || ||| Sbjct 113443 GACACTATTGAAAATGTCAAAGCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 113502 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | || |||| | || || ||| | ||||||| | | | || ||||| Sbjct 113503 CAACGTCTTATTTTTGCTGGTAAGCAATTAGAAGATGGACGTACTCTTTCTGATTATAAT 113562 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTC 26978 ||||||||||||||||| ||||| ||||| Sbjct 113563 ATTCAAAAAGAATCTACACTCCATTTGGTC 113592 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || ||||| || || ||||| || | |||||| | ||| ||||||| Sbjct 113839 ATGCAAATCTTCGTAAAGACCTTGACTGGTAAGACTATCACCTTAGAAGTAGAATCTTCT 113898 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | |||||| || ||| || || ||||| || ||||| |||||| Sbjct 113899 GACACTATTGAAAATGTCAAAGCTAAAATTCAAGATAAGGAAGGTATTCCTCCAGATCAA 113958 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | || |||| | || || ||| | ||||||| | | | || ||||| Sbjct 113959 CAACGTCTTATTTTTGCTGGTAAGCAATTAGAAGATGGACGTACTCTTTCTGATTATAAT 114018 Query 26949 ATTCAAAAAGAATCTACTATCCA 26971 ||||||||||||||||| |||| Sbjct 114019 ATTCAAAAAGAATCTACACTCCA 114041 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || ||||| || || ||||| || | |||||| | ||| ||||||| Sbjct 113155 ATGCAAATCTTCGTAAAGACTTTGACTGGTAAGACTATCACCTTAGAAGTAGAATCTTCT 113214 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | || ||| |||||| || || ||||| || || || || ||| Sbjct 113215 GACACTATTGAAAACGTTAAAGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGACCAA 113274 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | || |||| | || || ||| | ||||||| | | | || ||||| Sbjct 113275 CAACGTCTTATTTTTGCTGGTAAGCAATTAGAAGATGGACGTACTCTTTCTGATTATAAT 113334 Query 26949 ATTCAAAAAGAATCTACTATCCA 26971 ||||||||||||||||| |||| Sbjct 113335 ATTCAAAAAGAATCTACACTCCA 113357 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || ||||| || || ||||| || | |||||| | ||| ||||||| Sbjct 113611 ATGCAAATCTTCGTAAAGACTTTGACTGGTAAGACTATCACCTTAGAAGTAGAATCTTCT 113670 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | || ||| |||||| || || ||||| || || || || ||| Sbjct 113671 GACACTATTGAAAACGTTAAAGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGACCAA 113730 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | || |||| | || || ||| | ||||||| | | | || ||||| Sbjct 113731 CAACGTCTTATTTTTGCTGGTAAGCAATTAGAAGATGGACGTACTCTTTCTGATTATAAT 113790 Query 26949 ATTCAAAAAGAATCTACTATCCA 26971 ||||||||||||||||| |||| Sbjct 113791 ATTCAAAAAGAATCTACACTCCA 113813 >seq748 Length=202608 Score = 100 bits (110), Expect = 3e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || |||||||| ||| | || || | ||| ||||||| Sbjct 91199 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATTACTTTAGAAGTAGAATCTTCT 91258 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||| || | |||||| |||||| || |||||||| || || || || ||| Sbjct 91259 GATACCATTGAAAATGTCAAAGCTAAGATTCAAGATAAAGAAGGTATTCCACCAGACCAA 91318 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | || |||| | || |||||| | ||||||| | | | || || ||| Sbjct 91319 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAAC 91378 Query 26949 ATTCAAAAAGAATCTACT 26966 |||||||||||||||||| Sbjct 91379 ATTCAAAAAGAATCTACT 91396 Score = 100 bits (110), Expect = 3e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || |||||||| ||| | || || | ||| ||||||| Sbjct 91655 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATTACTTTAGAAGTAGAATCTTCT 91714 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||| || | |||||| |||||| || |||||||| || || || || ||| Sbjct 91715 GATACCATTGAAAATGTCAAAGCTAAGATTCAAGATAAAGAAGGTATTCCACCAGACCAA 91774 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | || |||| | || |||||| | ||||||| | | | || || ||| Sbjct 91775 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAAC 91834 Query 26949 ATTCAAAAAGAATCTACT 26966 |||||||||||||||||| Sbjct 91835 ATTCAAAAAGAATCTACT 91852 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 || |||||| | ||||| || || |||||||| ||| | ||||| | ||| | ||||| Sbjct 90968 AAGATGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATCACTTTAGAAGTTGAATCT 91027 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 || || || || | |||||| |||||| || || ||||| || || || || Sbjct 91028 TCTGATACTATTGAAAATGTCAAAGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGAC 91087 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 |||||| | || |||| | || |||||| | ||||||| | | | || || Sbjct 91088 CAACAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTAC 91147 Query 26946 AACATTCAAAAAGAATCTACT 26966 ||||||||||||||||||||| Sbjct 91148 AACATTCAAAAAGAATCTACT 91168 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || |||||||| || | ||||| | ||| | ||||| Sbjct 91427 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAGACTATCACTTTAGAAGTTGAATCTTCT 91486 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || || || || | || ||| |||||| || |||||||| || || || || ||| Sbjct 91487 GATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAAAGAAGGTATTCCACCAGACCAA 91546 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | || |||| | || |||||| | ||||||| | | | || || ||| Sbjct 91547 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAAC 91606 Query 26949 ATTCAAAAAGAATCTACT 26966 |||||||||||||||||| Sbjct 91607 ATTCAAAAAGAATCTACT 91624 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || |||||||| || | ||||| | ||| ||||||| Sbjct 91883 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAGACTATCACTTTAGAAGTAGAATCTTCT 91942 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || || || || | || ||| |||||| || || ||||| || || || || ||| Sbjct 91943 GATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGACCAA 92002 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | || |||| | || |||||| | ||||||| | | | || || ||| Sbjct 92003 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAAC 92062 Query 26949 ATTCAAAAAGAATCTACT 26966 |||||||||||||||||| Sbjct 92063 ATTCAAAAAGAATCTACT 92080 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || |||||||| ||| | || || | ||| | ||||| Sbjct 92111 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATTACTTTAGAAGTTGAATCTTCT 92170 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || || || || | || ||| |||||| || || ||||| || || || || ||| Sbjct 92171 GATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGACCAA 92230 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | || |||| | || |||||| | ||||||| | | | || || ||| Sbjct 92231 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAAC 92290 Query 26949 ATTCAAAAAGAATCTACTATCCA 26971 |||||||||||||||||| |||| Sbjct 92291 ATTCAAAAAGAATCTACTCTCCA 92313 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/203 (69%), Gaps = 1/203 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || |||||||| ||| | || || | ||| | ||||| Sbjct 92339 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATTACTTTAGAAGTTGAATCTTCT 92398 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || || || || | || ||| |||||| || || ||||| || || || || ||| Sbjct 92399 GATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAA-GAAGGTATTCCACCAGACCAA 92457 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | || |||| | || |||||| | ||||||| | | | || || ||| Sbjct 92458 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAAC 92517 Query 26949 ATTCAAAAAGAATCTACTATCCA 26971 |||||||||||||||||| |||| Sbjct 92518 ATTCAAAAAGAATCTACTCTCCA 92540 >seq179 Length=111796 Score = 96.9 bits (106), Expect = 3e-15 Identities = 154/220 (70%), Gaps = 1/220 (0%) Strand=Plus/Minus Query 26762 AAACAAAATGCAAG-TGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAG 26820 ||| ||||| ||| | ||||| ||||| | ||||| || | || ||| | ||| | | Sbjct 96582 AAAAAAAATAAAAGATTTTTGTTAAAACTCTCACTGGTAAGACCATTACCTTAGAAGTTG 96523 Query 26821 AATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTC 26880 |||| ||||| || || | |||||| |||||| || || ||||| || || | Sbjct 96522 AATCTTCTGACACTATTGAAAATGTCAAAGCTAAGATTCAAGATAAGGAAGGTATTCCAC 96463 Query 26881 CCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCG 26940 | ||||||||| | | || | | ||| |||||| | ||||||| | | | | | Sbjct 96462 CAGATCAACAACGTTTAATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTG 96403 Query 26941 ACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 | || ||||||||||||||||||||| | ||||| || || Sbjct 96402 ATTACAACATTCAAAAAGAATCTACTCTTCATCTTGTTCT 96363 >seq304 Length=284809 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| ||||| | || || || | || ||| | || | ||||| | Sbjct 189727 ATGCAAATCTTTGTCAAAACCCTTACGGGTAAGACCATTACCCTTGAGGTTGAATCCTCC 189668 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | |||||| ||||| || || ||||| || || || || ||| Sbjct 189667 GACACTATTGAAAATGTCAAAGCTAAGATCCAAGATAAGGAAGGTATCCCACCAGACCAA 189608 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | || || | || ||| || ||| | ||||||| | | | | ||||| ||| Sbjct 189607 CAACGTCTTATCTTCGCCGGTAAGCAATTAGAAGATGGTCGTACTCTTTCTGACTACAAC 189548 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 |||||||| ||||||||| | ||||| ||||| Sbjct 189547 ATTCAAAAGGAATCTACTTTACATCTTGTCCT 189516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478656207305200