Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq304 102 7e-17 seq179 98.7 8e-16 seq748 91.5 1e-13 seq172 86.0 5e-12 >seq304 Length=284809 Score = 102 bits (112), Expect = 7e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| ||||||||||| || ||||| || ||||||||| | || || ||| | Sbjct 189727 ATGCAAATCTTTGTCAAAACCCTTACGGGTAAGACCATTACCCTTGAGGTTGAATCCTCC 189668 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 |||||| ||| | | || ||| || || ||||| ||||| |||| || || Sbjct 189667 GACACTATTGAAAATGTCAAAGCTAAGATCCAAGATAAGGAAGGTATCCCACCAGACCAA 189608 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | ||||| | || || || ||||||||||||| || | | || || ||| Sbjct 189607 CAACGTCTTATCTTCGCCGGTAAGCAATTAGAAGATGGTCGTACTCTTTCTGACTACAAC 189548 Query 115466 ATTCAAAAAGAGTCTACTATACAT 115489 |||||||| || |||||| ||||| Sbjct 189547 ATTCAAAAGGAATCTACTTTACAT 189524 >seq179 Length=111796 Score = 98.7 bits (108), Expect = 8e-16 Identities = 148/209 (71%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 115282 AAAAATGCAA-ATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGT 115340 |||||| || |||||||| ||||| ||||| || || ||||||||| | ||| || | Sbjct 96579 AAAAATAAAAGATTTTTGTTAAAACTCTCACTGGTAAGACCATTACCTTAGAAGTTGAAT 96520 Query 115341 CCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTG 115400 | |||||| ||| | | || ||| || ||| ||||| ||||| | || | Sbjct 96519 CTTCTGACACTATTGAAAATGTCAAAGCTAAGATTCAAGATAAGGAAGGTATTCCACCAG 96460 Query 115401 ATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATT 115460 |||| ||| | | || | ||| || |||||||||||||||| || | | |||| Sbjct 96459 ATCAACAACGTTTAATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATT 96400 Query 115461 ATAACATTCAAAAAGAGTCTACTATACAT 115489 | |||||||||||||| |||||| | ||| Sbjct 96399 ACAACATTCAAAAAGAATCTACTCTTCAT 96371 >seq748 Length=202608 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 115281 TAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGT 115340 |||| |||||||||||||| || || | || || ||||| || || | ||| || | Sbjct 90966 TAAAGATGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATCACTTTAGAAGTTGAAT 91025 Query 115341 CCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTG 115400 | || ||| ||| | | || ||| || ||| ||||| ||||| | || | Sbjct 91026 CTTCTGATACTATTGAAAATGTCAAAGCTAAGATTCAAGATAAGGAAGGTATTCCACCAG 91085 Query 115401 ATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATT 115460 | || ||| | ||||||| ||| || |||||||||||||||| || | | |||| Sbjct 91086 ACCAACAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATT 91145 Query 115461 ATAACATTCAAAAAGAGTCTACT 115483 | |||||||||||||| |||||| Sbjct 91146 ACAACATTCAAAAAGAATCTACT 91168 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||| || || | || || ||||| ||||| | ||| || || Sbjct 91199 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATTACTTTAGAAGTAGAATCTTCT 91258 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || || ||| | | || ||| || ||| ||||||||||| | || || || Sbjct 91259 GATACCATTGAAAATGTCAAAGCTAAGATTCAAGATAAAGAAGGTATTCCACCAGACCAA 91318 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | ||||||| ||| || |||||||||||||||| || | | ||||| ||| Sbjct 91319 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAAC 91378 Query 115466 ATTCAAAAAGAGTCTACT 115483 ||||||||||| |||||| Sbjct 91379 ATTCAAAAAGAATCTACT 91396 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||| || || | || || ||||| ||||| | ||| || || Sbjct 91655 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATTACTTTAGAAGTAGAATCTTCT 91714 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || || ||| | | || ||| || ||| ||||||||||| | || || || Sbjct 91715 GATACCATTGAAAATGTCAAAGCTAAGATTCAAGATAAAGAAGGTATTCCACCAGACCAA 91774 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | ||||||| ||| || |||||||||||||||| || | | ||||| ||| Sbjct 91775 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAAC 91834 Query 115466 ATTCAAAAAGAGTCTACT 115483 ||||||||||| |||||| Sbjct 91835 ATTCAAAAAGAATCTACT 91852 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||| || || | || || ||||| ||||| | ||| || || Sbjct 92111 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATTACTTTAGAAGTTGAATCTTCT 92170 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || ||| ||| | | || ||| || ||| ||||| ||||| | || || || Sbjct 92171 GATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGACCAA 92230 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | ||||||| ||| || |||||||||||||||| || | | ||||| ||| Sbjct 92231 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAAC 92290 Query 115466 ATTCAAAAAGAGTCTACT 115483 ||||||||||| |||||| Sbjct 92291 ATTCAAAAAGAATCTACT 92308 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||| || || | || || || || || || | ||| || || Sbjct 91427 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAGACTATCACTTTAGAAGTTGAATCTTCT 91486 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || ||| ||| | | || ||| || ||| ||||||||||| | || || || Sbjct 91487 GATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAAAGAAGGTATTCCACCAGACCAA 91546 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | ||||||| ||| || |||||||||||||||| || | | ||||| ||| Sbjct 91547 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAAC 91606 Query 115466 ATTCAAAAAGAGTCTACT 115483 ||||||||||| |||||| Sbjct 91607 ATTCAAAAAGAATCTACT 91624 Score = 87.8 bits (96), Expect = 2e-12 Identities = 139/198 (70%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||| || || | || || ||||| ||||| | ||| || || Sbjct 92339 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATTACTTTAGAAGTTGAATCTTCT 92398 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || ||| ||| | | || ||| || ||| ||||| ||||| | || || || Sbjct 92399 GATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAA-GAAGGTATTCCACCAGACCAA 92457 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | ||||||| ||| || |||||||||||||||| || | | ||||| ||| Sbjct 92458 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAAC 92517 Query 115466 ATTCAAAAAGAGTCTACT 115483 ||||||||||| |||||| Sbjct 92518 ATTCAAAAAGAATCTACT 92535 Score = 82.4 bits (90), Expect = 6e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||| || || | || || || || || || | ||| || || Sbjct 91883 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAGACTATCACTTTAGAAGTAGAATCTTCT 91942 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || ||| ||| | | || ||| || ||| ||||| ||||| | || || || Sbjct 91943 GATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGACCAA 92002 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | ||||||| ||| || |||||||||||||||| || | | ||||| ||| Sbjct 92003 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAAC 92062 Query 115466 ATTCAAAAAGAGTCTACT 115483 ||||||||||| |||||| Sbjct 92063 ATTCAAAAAGAATCTACT 92080 >seq172 Length=114120 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| || || || || | || || || || || ||| | ||| || || Sbjct 113839 ATGCAAATCTTCGTAAAGACCTTGACTGGTAAGACTATCACCTTAGAAGTAGAATCTTCT 113898 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 |||||| ||| | | || ||| |||||| ||||| ||||| | || ||||| Sbjct 113899 GACACTATTGAAAATGTCAAAGCTAAAATTCAAGATAAGGAAGGTATTCCTCCAGATCAA 113958 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | ||||||| ||| || || ||||||||||||| || | | |||||||| Sbjct 113959 CAACGTCTTATTTTTGCTGGTAAGCAATTAGAAGATGGACGTACTCTTTCTGATTATAAT 114018 Query 115466 ATTCAAAAAGAGTCTAC 115482 ||||||||||| ||||| Sbjct 114019 ATTCAAAAAGAATCTAC 114035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425338634684200