Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq304 104 2e-17 seq179 86.0 6e-12 >seq304 Length=284809 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || ||||| || || | ||||| || || ||||||||||||||||| || Sbjct 189501 CCACCACGTAAACGAAGGACAAGATGTAAAGTAGATTCCTTTTGAATGTTGTAGTCAGAA 189560 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || |||| ||||| || ||| |||| | ||| || ||||| || ||| Sbjct 189561 AGAGTACGACCATCTTCTAATTGCTTACCGGCGAAGATAAGACGTTGTTGGTCTGGTGGG 189620 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| || || ||| || |||| | || | ||| |||| ||| || | Sbjct 189621 ATACCTTCCTTATCTTGGATCTTAGCTTTGACATTTTCAATAGTGTCGGAGGATTCAACC 189680 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| ||| ||||| || || ||||| || || || ||||| Sbjct 189681 TCAAGGGTAATGGTCTTACCCGTAAGGGTTTTGACAAAGATTTGCAT 189727 >seq179 Length=111796 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/224 (69%), Gaps = 2/224 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || ||||| || || | ||| | || || || ||||||||||||||||| Sbjct 96348 CCACCACGTAAACGAAGAACAAGATGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 96407 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || |||| || || || || |||||||||| || || || || || Sbjct 96408 AGAGTACGACCATCTTCTAATTGTTTACCGGCAAAGATTAAACGTTGTTGATCTGGTGGA 96467 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| || || ||| | | || |||| | || | ||| || | || || | Sbjct 96468 ATACCTTCCTTATC-TTGAATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGATTCAAC 96526 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCT 131230 || | ||||| ||| ||||| || |||||||| || ||||||| Sbjct 96527 TTCTAAGGTAATGGTCTTACCAGTGAGAGTTTTAACAAAAATCT 96570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472006693334400