Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq748 109 4e-19 seq304 82.4 5e-11 >seq748 Length=202608 Score = 109 bits (120), Expect = 4e-19 Identities = 176/252 (70%), Gaps = 1/252 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| |||| || ||||| || ||||| ||||| | ||| ||| | | Sbjct 92339 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATTACTTTAGAAGTTGAATCTTCT 92398 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || |||| || ||| ||||| || ||| | || | ||||| Sbjct 92399 GATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAA-GAAGGTATTCCACCAGACCAA 92457 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || | ||||| |||||||| |||||| |||||||| | ||| | | |||||||| Sbjct 92458 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAAC 92517 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGATATTAATAATAA 22073 ||||| || ||||||||||| || | || |||||| | || || ||| ||||| | | Sbjct 92518 ATTCAAAAAGAATCTACTCTCCACTTAGTTTTACGTCTTCGTGGTGGAAATTAAAATTTT 92577 Query 22074 AAACCATAAATA 22085 ||| || |||| Sbjct 92578 AAATAATTAATA 92589 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| |||| || ||||| || ||||| ||||| | ||| ||| | | Sbjct 91199 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATTACTTTAGAAGTAGAATCTTCT 91258 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || || ||| |||||||| ||| | || | ||||| Sbjct 91259 GATACCATTGAAAATGTCAAAGCTAAGATTCAAGATAAAGAAGGTATTCCACCAGACCAA 91318 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || | ||||| |||||||| |||||| |||||||| | ||| | | |||||||| Sbjct 91319 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAAC 91378 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||| || |||||||||||||| | || |||||| | || || || Sbjct 91379 ATTCAAAAAGAATCTACTCTTCACTTAGTTTTACGTCTTCGTGGTGG 91425 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| |||| || ||||| || ||||| ||||| | ||| ||| | | Sbjct 91655 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATTACTTTAGAAGTAGAATCTTCT 91714 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || || ||| |||||||| ||| | || | ||||| Sbjct 91715 GATACCATTGAAAATGTCAAAGCTAAGATTCAAGATAAAGAAGGTATTCCACCAGACCAA 91774 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || | ||||| |||||||| |||||| |||||||| | ||| | | |||||||| Sbjct 91775 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAAC 91834 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||| || |||||||||||||| | || |||||| | || || || Sbjct 91835 ATTCAAAAAGAATCTACTCTTCACTTAGTCTTACGTCTTCGTGGTGG 91881 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| |||| || ||||| || || || || || | ||| ||| | | Sbjct 91427 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAGACTATCACTTTAGAAGTTGAATCTTCT 91486 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || |||| || ||| |||||||| ||| | || | ||||| Sbjct 91487 GATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAAAGAAGGTATTCCACCAGACCAA 91546 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || | ||||| |||||||| |||||| |||||||| | ||| | | |||||||| Sbjct 91547 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAAC 91606 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||| || |||||||||||||| | || |||||| | || || || Sbjct 91607 ATTCAAAAAGAATCTACTCTTCACTTAGTTTTACGTCTTCGTGGTGG 91653 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| |||| || ||||| || ||||| ||||| | ||| ||| | | Sbjct 92111 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATTACTTTAGAAGTTGAATCTTCT 92170 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || |||| || ||| ||||| || ||| | || | ||||| Sbjct 92171 GATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGACCAA 92230 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || | ||||| |||||||| |||||| |||||||| | ||| | | |||||||| Sbjct 92231 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAAC 92290 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||| || ||||||||||| || | || |||||| | || || || Sbjct 92291 ATTCAAAAAGAATCTACTCTCCACTTAGTCTTACGTCTTCGTGGTGG 92337 Score = 102 bits (112), Expect = 6e-17 Identities = 166/238 (70%), Gaps = 1/238 (0%) Strand=Plus/Plus Query 21823 AATAGTGCAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAA 21882 |||||| || |||||||| ||| |||| || ||||| || ||||| || || | ||| Sbjct 90961 AATAGTA-AAGATGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATCACTTTAGAAG 91019 Query 21883 CGGAAGCCGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTAC 21942 ||| | | || || | | || | || || ||| ||||| || ||| | | Sbjct 91020 TTGAATCTTCTGATACTATTGAAAATGTCAAAGCTAAGATTCAAGATAAGGAAGGTATTC 91079 Query 21943 CTGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGG 22002 | | ||||||| | ||||| |||||||| |||||| |||||||| | ||| | Sbjct 91080 CACCAGACCAACAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTT 91139 Query 22003 CCGATTACAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 | |||||||| ||||| || |||||||||||||| | || |||||| | || || || Sbjct 91140 CTGATTACAACATTCAAAAAGAATCTACTCTTCACTTAGTCTTACGTCTTCGTGGTGG 91197 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| |||| || ||||| || || || || || | ||| ||| | | Sbjct 91883 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAGACTATCACTTTAGAAGTAGAATCTTCT 91942 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || |||| || ||| ||||| || ||| | || | ||||| Sbjct 91943 GATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGACCAA 92002 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || | ||||| |||||||| |||||| |||||||| | ||| | | |||||||| Sbjct 92003 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAAC 92062 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||| || |||||||||||||| | || |||||| | || || || Sbjct 92063 ATTCAAAAAGAATCTACTCTTCACTTAGTCTTACGTCTTCGTGGTGG 92109 >seq304 Length=284809 Score = 82.4 bits (90), Expect = 5e-11 Identities = 170/251 (68%), Gaps = 3/251 (1%) Strand=Plus/Minus Query 21813 ATTTATAAGTAA-TAGTGCA--AAATGCAAATATTTATTAAAACATTAACGGGCAAAACC 21869 |||||||| ||| |||| | |||||||| ||| | ||||| | ||||| || ||| Sbjct 189751 ATTTATAATTAAATAGTAGTTGAGATGCAAATCTTTGTCAAAACCCTTACGGGTAAGACC 189692 Query 21870 ATTACCGTGGAAACGGAAGCCGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGAT 21929 |||||| | || ||| || | || || | | || | || || || ||| Sbjct 189691 ATTACCCTTGAGGTTGAATCCTCCGACACTATTGAAAATGTCAAAGCTAAGATCCAAGAT 189632 Query 21930 AAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGAT 21989 || || ||| | || | ||||||| | |||||||| || || || ||| |||||||| Sbjct 189631 AAGGAAGGTATCCCACCAGACCAACAACGTCTTATCTTCGCCGGTAAGCAATTAGAAGAT 189572 Query 21990 TTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGT 22049 ||| | | || ||||| ||||| |||||||||||| | ||| | || | ||| Sbjct 189571 GGTCGTACTCTTTCTGACTACAACATTCAAAAGGAATCTACTTTACATCTTGTCCTTCGT 189512 Query 22050 TTACGAGGAGG 22060 ||||| || || Sbjct 189511 TTACGTGGTGG 189501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358120282591390