Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq748 120 3e-22 seq172 116 4e-21 seq179 104 2e-17 seq304 86.0 6e-12 >seq748 Length=202608 Score = 120 bits (132), Expect = 3e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 |||| |||| || ||||||||||||||||||||||| | | || || | ||||| Sbjct 91635 ACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCT 91576 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 | || || || ||| |||| || || || ||||| || ||||| |||||||| ||||| Sbjct 91575 AATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATCTTGA 91516 Query 64355 ATTTTTTGCTTTACAACCTCCACT-GTATCACCGGCGTCCACTTCTACAGTTACGGTCTT 64413 || || |||||| | | || | |||||| | || ||||||| ||| | ||||| Sbjct 91515 ATCTTA-GCTTTAACATTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTGATAGTCTT 91457 Query 64414 GCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || ||||| || || ||||||||||| Sbjct 91456 ACCAGTTAAAGTCTTAACAAAAATTTGCAT 91427 Score = 116 bits (128), Expect = 4e-21 Identities = 157/215 (73%), Gaps = 3/215 (1%) Strand=Plus/Minus Query 64230 TAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGT 64289 |||| |||| |||| || ||||||||||||||||||||||| | | || || | | Sbjct 91867 TAAG-ACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCAT 91809 Query 64290 CTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTT 64349 |||| | || || || ||| |||| || || || ||||| || ||||| |||||||| | Sbjct 91808 CTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTAT 91749 Query 64350 CTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACG 64408 |||| || || ||||| ||| || | |||||| | || ||||||| ||| | Sbjct 91748 CTTGAATCTTA-GCTTTGACATTTTCAATGGTATCAGAAGATTCTACTTCTAAAGTAATA 91690 Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || || || ||||| || || ||||||||||| Sbjct 91689 GTTTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 91655 Score = 116 bits (128), Expect = 4e-21 Identities = 157/215 (73%), Gaps = 3/215 (1%) Strand=Plus/Minus Query 64230 TAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGT 64289 |||| |||| |||| || ||||||||||||||||||||||| | | || || | | Sbjct 92095 TAAG-ACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCAT 92037 Query 64290 CTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTT 64349 |||| | || || || ||| |||| || || || ||||| || ||||| ||||| || | Sbjct 92036 CTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTAT 91977 Query 64350 CTTGTATTTTTTGCTTTACAACCTCCACT-GTATCACCGGCGTCCACTTCTACAGTTACG 64408 |||| || || |||||| | | || | |||||| | || ||||||| ||| | Sbjct 91976 CTTGAATCTTA-GCTTTAACATTTTCAATAGTATCAGAAGATTCTACTTCTAAAGTGATA 91918 Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| || || ||||| || || ||||||||||| Sbjct 91917 GTCTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 91883 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 |||| |||| || ||||||||||||||||||||||| | | || || | ||||| Sbjct 91407 ACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCT 91348 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 | || || || ||| |||| || || || ||||| || ||||| |||||||| ||||| Sbjct 91347 AATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATCTTGA 91288 Query 64355 ATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTT 64413 || || ||||| ||| || | |||||| | || ||||||| ||| | || || Sbjct 91287 ATCTTA-GCTTTGACATTTTCAATGGTATCAGAAGATTCTACTTCTAAAGTAATAGTTTT 91229 Query 64414 GCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || ||||| || || ||||||||||| Sbjct 91228 ACCAGTTAAAGTCTTAACAAAAATTTGCAT 91199 Score = 113 bits (124), Expect = 5e-20 Identities = 162/223 (73%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 64230 TAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGT 64289 |||| |||| |||| || ||||||||||||||||||||||| | | || || | | Sbjct 91183 TAAG-ACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCAT 91125 Query 64290 CTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTT 64349 |||| | || || || ||| |||| || || || ||||| || ||||| ||||| || | Sbjct 91124 CTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTAT 91065 Query 64350 CTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACG 64408 |||| || || ||||| ||| || | |||||| | || ||||||| ||| | Sbjct 91064 CTTGAATCTTA-GCTTTGACATTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTGATA 91006 Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT-TTTAATA 64450 || || || || ||||| || || ||||||||||| |||| || Sbjct 91005 GTTTTACCAGTTAAAGTCTTAACAAAAATTTGCATCTTTACTA 90963 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||||||||||||||||||||| | | || || | ||||| | || || || Sbjct 92307 GTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCTAATTGTTTACCA 92248 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| |||| || || || ||||| || ||||| ||||| || ||||| || || ||||| Sbjct 92247 GCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATCTTGAATCTTA-GCTTT 92189 Query 64367 ACAACCTCCACT-GTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425 | | | || | |||||| | || ||||||| ||| | || || || || ||||| Sbjct 92188 AACATTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTAATAGTTTTACCAGTTAAAGT 92129 Query 64426 TTTTACGAAAATTTGCAT 64443 || || ||||||||||| Sbjct 92128 CTTAACAAAAATTTGCAT 92111 Score = 104 bits (114), Expect = 2e-17 Identities = 144/198 (73%), Gaps = 3/198 (2%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||||||||||||||||||||| | | || || | ||||| | || || || Sbjct 92534 GTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCTAATTGTTTACCA 92475 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| |||| || || || ||||| || ||||| ||||| || ||||| | | || ||||| Sbjct 92474 GCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTC-TTATCTTG-AATCTTAGCTTT 92417 Query 64367 -ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425 ||| || | |||||| | || ||||||| ||| | || || || || ||||| Sbjct 92416 AACATTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTAATAGTTTTACCAGTTAAAGT 92357 Query 64426 TTTTACGAAAATTTGCAT 64443 || || ||||||||||| Sbjct 92356 CTTAACAAAAATTTGCAT 92339 >seq172 Length=114120 Score = 116 bits (128), Expect = 4e-21 Identities = 148/201 (74%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || |||||||||||||| || ||||| | | || || | ||||| | ||||| || Sbjct 112895 GTAGATTCTTTTTGAATATTATAATCAGAAAGAGTACGTCCATCTTCTAATTGCTTACCA 112836 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| |||| || || || ||||| |||||||||||||| || ||||| | | || ||||| Sbjct 112835 GCAAAAATAAGACGTTGTTGGTCTGGAGGAATTCCTTCCTTGTCTTG-AATCTTAGCTTT 112777 Query 64367 -ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425 ||| || | || ||| | || ||||||| || | ||||| || || ||||| Sbjct 112776 GACATTTTCAATAGTGTCAGAAGATTCTACTTCTAAGGTGATAGTCTTACCAGTTAAAGT 112717 Query 64426 TTTTACGAAAATTTGCATTTT 64446 |||||||| ||||||||||| Sbjct 112716 CTTTACGAAGATTTGCATTTT 112696 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || |||||||||||||| || ||||| | | || || | ||||| | ||||| || Sbjct 113123 GTAGATTCTTTTTGAATATTATAATCAGAAAGAGTACGTCCATCTTCTAATTGCTTACCA 113064 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| |||| || || || ||||| |||||||| ||||| || ||||| | | || ||||| Sbjct 113063 GCAAAAATAAGACGTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTG-AATCTTAGCTTT 113005 Query 64367 -ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425 ||| || | || ||| | || ||||||| || | ||||| || ||||| || Sbjct 113004 GACATTTTCAATAGTGTCAGAAGATTCTACTTCTAAGGTGATAGTCTTACCAGTCAAGGT 112945 Query 64426 TTTTACGAAAATTTGCAT 64443 |||||||| |||||||| Sbjct 112944 CTTTACGAAGATTTGCAT 112927 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || |||||||||||||| || ||||| | | || || | ||||| | ||||| || Sbjct 113579 GTAGATTCTTTTTGAATATTATAATCAGAAAGAGTACGTCCATCTTCTAATTGCTTACCA 113520 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| |||| || || || ||||| |||||||| ||||| || ||||| | | || ||||| Sbjct 113519 GCAAAAATAAGACGTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTG-AATCTTAGCTTT 113461 Query 64367 -ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425 ||| || | || ||| | || ||||||| || | ||||| || ||||| || Sbjct 113460 GACATTTTCAATAGTGTCAGAAGATTCTACTTCTAAGGTGATAGTCTTACCAGTCAAGGT 113401 Query 64426 TTTTACGAAAATTTGCAT 64443 |||||||| |||||||| Sbjct 113400 CTTTACGAAGATTTGCAT 113383 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || |||||||||||||| || ||||| | | || || | ||||| | ||||| || Sbjct 114035 GTAGATTCTTTTTGAATATTATAATCAGAAAGAGTACGTCCATCTTCTAATTGCTTACCA 113976 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| |||| || || || || || |||||||| ||||| || ||||| | |||| ||||| Sbjct 113975 GCAAAAATAAGACGTTGTTGATCTGGAGGAATACCTTCCTTATCTTG-AATTTTAGCTTT 113917 Query 64367 -ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425 ||| || | || ||| | || ||||||| || | ||||| || ||||| || Sbjct 113916 GACATTTTCAATAGTGTCAGAAGATTCTACTTCTAAGGTGATAGTCTTACCAGTCAAGGT 113857 Query 64426 TTTTACGAAAATTTGCAT 64443 |||||||| |||||||| Sbjct 113856 CTTTACGAAGATTTGCAT 113839 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || |||||||||||||| || ||||| | | || || | ||||| | ||||| || Sbjct 113351 GTAGATTCTTTTTGAATATTATAATCAGAAAGAGTACGTCCATCTTCTAATTGCTTACCA 113292 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| |||| || || || ||||| || ||||| ||||| || ||||| | | || ||||| Sbjct 113291 GCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATCTTG-AATCTTAGCTTT 113233 Query 64367 -ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425 || || | || ||| | || ||||||| || | ||||| || |||||||| Sbjct 113232 AACGTTTTCAATAGTGTCAGAAGATTCTACTTCTAAGGTGATAGTCTTACCAGTCAAAGT 113173 Query 64426 TTTTACGAAAATTTGCAT 64443 |||||||| |||||||| Sbjct 113172 CTTTACGAAGATTTGCAT 113155 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || |||||||||||||| || ||||| | | || || | ||||| | ||||| || Sbjct 113807 GTAGATTCTTTTTGAATATTATAATCAGAAAGAGTACGTCCATCTTCTAATTGCTTACCA 113748 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| |||| || || || ||||| || ||||| ||||| || ||||| | | || ||||| Sbjct 113747 GCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATCTTG-AATCTTAGCTTT 113689 Query 64367 -ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425 || || | || ||| | || ||||||| || | ||||| || |||||||| Sbjct 113688 AACGTTTTCAATAGTGTCAGAAGATTCTACTTCTAAGGTGATAGTCTTACCAGTCAAAGT 113629 Query 64426 TTTTACGAAAATTTGCAT 64443 |||||||| |||||||| Sbjct 113628 CTTTACGAAGATTTGCAT 113611 >seq179 Length=111796 Score = 104 bits (114), Expect = 2e-17 Identities = 165/233 (71%), Gaps = 3/233 (1%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || || | ||| || ||||||| || ||||||||||||||||||||||| | Sbjct 96347 ACCACCACGTAAACGAAGAACAAGATGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGA 96406 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || | ||||| | || || |||||| | || | || || || || || || Sbjct 96407 AAGAGTACGACCATCTTCTAATTGTTTACCGGCAAAGATTAAACGTTGTTGATCTGGTGG 96466 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394 ||| ||||| || ||||| | | || ||||| ||| || | || ||| | || | Sbjct 96467 AATACCTTCCTTATCTTG-AATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGATTCAA 96525 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAAT-TTGCATTTT 64446 |||||| || | |||||| || || | |||||| || ||||| || ||||| Sbjct 96526 CTTCTAAGGTAATGGTCTTACCAGTGAGAGTTTTAACAAAAATCTTTTATTTT 96578 >seq304 Length=284809 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || || | ||| || ||||| | || ||||| |||||||||||||| || | Sbjct 189500 ACCACCACGTAAACGAAGGACAAGATGTAAAGTAGATTCCTTTTGAATGTTGTAGTCAGA 189559 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || | ||||| | ||||| ||||| | || || || || ||||| || || Sbjct 189560 AAGAGTACGACCATCTTCTAATTGCTTACCGGCGAAGATAAGACGTTGTTGGTCTGGTGG 189619 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394 || ||||| || ||||| | | || ||||| ||| || | || || || || | Sbjct 189620 GATACCTTCCTTATCTTGGA-TCTTAGCTTTGACATTTTCAATAGTGTCGGAGGATTCAA 189678 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 | || | || | |||||| || || | ||||| || || |||||||| Sbjct 189679 CCTCAAGGGTAATGGTCTTACCCGTAAGGGTTTTGACAAAGATTTGCAT 189727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499638335845400