Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq748 107 2e-18 seq304 107 2e-18 seq179 104 2e-17 seq233 82.4 8e-11 seq53 82.4 8e-11 >seq748 Length=202608 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| |||||||| || | | || || |||||||||||||| || Sbjct 91425 CCACCACGAAGACGTAAAACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 91366 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| || || | ||||||||| | | | || ||||| |||||||| || || Sbjct 91365 AGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGA 91306 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT-TGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||||||||| || ||| | || | ||| | | ||| | ||| || | || || || Sbjct 91305 ATACCTTCTTTATCT-TGAATCTTAGCTTTGACATTTTCAATGGTATCAGAAGATTCTAC 91247 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||||||||| | ||| || |||||||| ||||| Sbjct 91246 TTCTAAAGTAATAGTTTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 91199 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| |||||||| || | | || || |||||||||||||| || Sbjct 91653 CCACCACGAAGACGTAAAACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 91594 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| || || | ||||||||| | | | || ||||| |||||||| || || Sbjct 91593 AGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGA 91534 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||||||||| || ||| | || | ||||| | ||| | || || | || || || Sbjct 91533 ATACCTTCTTTATC-TTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCAAC 91475 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || |||||||| | ||| || |||||||| ||||| Sbjct 91474 TTCTAAAGTGATAGTCTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 91427 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| || ||||| || | | || || |||||||||||||| || Sbjct 91881 CCACCACGAAGACGTAAGACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 91822 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| || || | ||||||||| | | | || ||||| |||||||| || || Sbjct 91821 AGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGA 91762 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT-TGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||||||||| || ||| | || | ||| | | ||| | ||| || | || || || Sbjct 91761 ATACCTTCTTTATCT-TGAATCTTAGCTTTGACATTTTCAATGGTATCAGAAGATTCTAC 91703 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||||||||| | ||| || |||||||| ||||| Sbjct 91702 TTCTAAAGTAATAGTTTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 91655 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| || ||||| || | | || || |||||||||||||| || Sbjct 92337 CCACCACGAAGACGTAAGACTAAGTGGAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 92278 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| || || | ||||||||| | | | || ||||| |||||||| || || Sbjct 92277 AGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGA 92218 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||| || || ||| | || | ||||| | ||| | || || | || || || Sbjct 92217 ATACCTTCCTTATC-TTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCAAC 92159 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||||||||| | ||| || |||||||| ||||| Sbjct 92158 TTCTAAAGTAATAGTTTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 92111 Score = 98.7 bits (108), Expect = 1e-15 Identities = 161/228 (71%), Gaps = 3/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| |||||||| || | | || || |||||||||||||| || Sbjct 92564 CCACCACGAAGACGTAAAACTAAGTGGAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 92505 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| || || | ||||||||| | | | || ||||| |||||||| || || Sbjct 92504 AGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGA 92445 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||| || || ||| | || | ||||| | ||| | || || | || || || Sbjct 92444 ATACCTTC-TTATC-TTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCAAC 92387 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||||||||| | ||| || |||||||| ||||| Sbjct 92386 TTCTAAAGTAATAGTTTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 92339 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| || ||||| || | | || || |||||||||||||| || Sbjct 91197 CCACCACGAAGACGTAAGACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 91138 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| || || | ||||||||| | | | || ||||| |||||||| || || Sbjct 91137 AGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGA 91078 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||| || || ||| | || | ||| | | ||| | || || | || || || Sbjct 91077 ATACCTTCCTTATC-TTGAATCTTAGCTTTGACATTTTCAATAGTATCAGAAGATTCAAC 91019 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||||||||| | ||| || |||||||| ||||| Sbjct 91018 TTCTAAAGTGATAGTTTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 90971 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| || ||||| || | | || || |||||||||||||| || Sbjct 92109 CCACCACGAAGACGTAAGACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 92050 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| || || | ||||||||| | | | || ||||| |||||||| || || Sbjct 92049 AGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGA 91990 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||| || || ||| | || | ||||| | ||| | || || | || || || Sbjct 91989 ATACCTTCCTTATC-TTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCTAC 91931 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || |||||||| | ||| || |||||||| ||||| Sbjct 91930 TTCTAAAGTGATAGTCTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 91883 >seq304 Length=284809 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || ||||| | || | ||||| | || |||||||||||||||||||| Sbjct 189501 CCACCACGTAAACGAAGGACAAGATGTAAAGTAGATTCCTTTTGAATGTTGTAGTCAGAA 189560 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| || || | ||| ||||||| |||| ||||| |||||||| || || Sbjct 189561 AGAGTACGACCATCTTCTAATTGCTTACCGGCGAAGATAAGACGTTGTTGGTCTGGTGGG 189620 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 |||||||| || || ||| || ||| | | ||| | ||||||| || || ||| Sbjct 189621 ATACCTTCCTTATCTTGGATCTTAGCTTTGACATTTTCAATAGTGTCGGAGGATTCAACC 189680 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || ||||| || || ||||| ||||| || ||||| Sbjct 189681 TCAAGGGTAATGGTCTTACCCGTAAGGGTTTTGACAAAGATTTGCAT 189727 >seq179 Length=111796 Score = 104 bits (114), Expect = 2e-17 Identities = 159/224 (71%), Gaps = 2/224 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || ||||| | ||| | ||| | | || || |||||||||||||| || Sbjct 96348 CCACCACGTAAACGAAGAACAAGATGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 96407 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| || || | ||||||||||| | |||||| ||| ||||| || || || Sbjct 96408 AGAGTACGACCATCTTCTAATTGTTTACCGGCAAAGATTAAACGTTGTTGATCTGGTGGA 96467 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||| || || ||| | || | ||| | | ||| | ||||| | || || || Sbjct 96468 ATACCTTCCTTATC-TTGAATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGATTCAAC 96526 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCT 138610 || | || | || |||||||| |||||||| |||||||||| Sbjct 96527 TTCTAAGGTAATGGTCTTACCAGTGAGAGTTTTAACAAAAATCT 96570 >seq233 Length=93418 Score = 82.4 bits (90), Expect = 8e-11 Identities = 133/188 (71%), Gaps = 4/188 (2%) Strand=Plus/Plus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 ||||||||||||||||||| | || | || || | ||||||||||| ||| Sbjct 51823 CCTTTTGAATGTTGTAGTCAGAAAGGGTTCTGTCATCTTCTAATTGTTTACCGGCGAAGA 51882 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA--ATTG 138542 | ||||| |||||||| || || |||||||| || || ||| | || | ||| |||| Sbjct 51883 TAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTTTC-TTGAATCTTGTTCTTAACATTG 51941 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 | | |||||| ||||| ||||| | || | || || ||||| || ||||| || Sbjct 51942 -ACAATACTGTCGGAAGACTCAACCTCAAGGGTTATAGTCTTTCCAGTAAGGGTTTTGAC 52000 Query 138603 AAAAATCT 138610 ||||||| Sbjct 52001 GAAAATCT 52008 >seq53 Length=166033 Score = 82.4 bits (90), Expect = 8e-11 Identities = 141/202 (70%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 138410 AATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTT 138469 ||| ||| ||| || ||||||| ||||||||||| | |||||| || || | || Sbjct 113416 AATATATATTT-AC-CCTTTTGGATGTTGTAGTCAGAAAGAGTACGGTCATCTTCTAATT 113359 Query 138470 GTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTT 138529 | ||||| | | |||| ||| ||||| || || || |||||||| || || ||| | Sbjct 113358 GCTTACCAGCGAAAATTAAACGTTGTTGATCTGGTGGAATACCTTCCTTTTCTTGGATCT 113299 Query 138530 TTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAG 138589 |||| || | | | | | |||||| || || ||||| | || | || || || | Sbjct 113298 TTTGCTTAACATTAACAATGCTGTCGGAAGATTCAACCTCAAGGGTTATAGTCTTTCCGG 113239 Query 138590 TCAGAGTTTTTACAAAAATCTG 138611 | || || |||||||||||||| Sbjct 113238 TAAGGGTCTTTACAAAAATCTG 113217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496255979605200