Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq304 116 9e-21 seq748 105 2e-17 seq179 105 2e-17 seq53 84.2 5e-11 >seq304 Length=284809 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||| || | ||| || |||||||| | ||||||||||| | ||| | |||||| Sbjct 189516 AGGACAAGATGTAAAGTAGATTCCTTTTGAATGTTGTAGTCAGAAAGAGTACGACCATCT 189575 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || | ||||| ||||||||||| ||||| || ||||| || || ||||| || Sbjct 189576 TCTAATTGCTTACCGGCGAAGATAAGACGTTGTTGGTCTGGTGGGATACCTTCCTTATCT 189635 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| || || ||| | ||||| | | ||| || || | || || ||| Sbjct 189636 TGGATCTTAGCTTTGACATTTTCAATAGTGTCGGAGGATTCAACCTCAAGGGTAATGGTC 189695 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || ||||| ||||| ||||| Sbjct 189696 TTACCCGTAAGGGTTTTGACAAAGATTTG 189724 >seq748 Length=202608 Score = 105 bits (116), Expect = 2e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | | ||| | ||| ||||| || || ||||| | |||||| |||| | ||| Sbjct 91875 CGAAGACGTAAGACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTA 91816 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||| | || || || || || || ||||| || ||||| || ||| ||| Sbjct 91815 CGTCCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCT 91756 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || |||||||| || || ||| | ||| || | | |||||| || || Sbjct 91755 TCTTTATCTTGAATCTTAGCTTTGACATTTTCAATGGTATCAGAAGATTCTACTTCTAAA 91696 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| || | ||| || ||||||||||| Sbjct 91695 GTAATAGTTTTACCAGTTAAAGTCTTAACAAAAATTTG 91658 Score = 105 bits (116), Expect = 2e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | | ||| | ||| ||||| || || ||||| | |||||| |||| | ||| Sbjct 92103 CGAAGACGTAAGACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTA 92044 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||| | || || || || || || ||||| || ||||| || ||| ||| Sbjct 92043 CGTCCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCT 91984 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||| || || ||| | || || | | |||||| || || Sbjct 91983 TCCTTATCTTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCTACTTCTAAA 91924 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| |||||||| || | ||| || ||||||||||| Sbjct 91923 GTGATAGTCTTACCAGTTAAAGTCTTAACAAAAATTTG 91886 Score = 102 bits (112), Expect = 2e-16 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| ||||| || || ||||| | |||||| |||| | ||| | ||||||||| | || Sbjct 91402 GTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCTAATTG 91343 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 || || || || || ||||| || ||||| || ||| |||||| || |||||||| Sbjct 91342 TTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATCTTGAATCTT 91283 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 || || ||| | ||| || | | |||||| || || || || || ||||| || Sbjct 91282 AGCTTTGACATTTTCAATGGTATCAGAAGATTCTACTTCTAAAGTAATAGTTTTACCAGT 91223 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 | ||| || ||||||||||| Sbjct 91222 TAAAGTCTTAACAAAAATTTG 91202 Score = 102 bits (112), Expect = 2e-16 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| ||||| || || ||||| | |||||| |||| | ||| | ||||||||| | || Sbjct 91630 GTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCTAATTG 91571 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 || || || || || ||||| || ||||| || ||| |||||| || |||||||| Sbjct 91570 TTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATCTTGAATCTT 91511 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 || || ||| | || || | | ||| || || || ||||| |||||||| || Sbjct 91510 AGCTTTAACATTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTGATAGTCTTACCAGT 91451 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 | ||| || ||||||||||| Sbjct 91450 TAAAGTCTTAACAAAAATTTG 91430 Score = 98.7 bits (108), Expect = 2e-15 Identities = 177/256 (69%), Gaps = 6/256 (2%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | | ||| | ||| ||||| || || ||||| | |||||| |||| | ||| Sbjct 91191 CGAAGACGTAAGACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTA 91132 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||| | || || || || || || ||||| || ||||| || ||| ||| Sbjct 91131 CGTCCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCT 91072 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||| || || ||| | || || | | ||| || || || Sbjct 91071 TCCTTATCTTGAATCTTAGCTTTGACATTTTCAATAGTATCAGAAGATTCAACTTCTAAA 91012 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTTAGCCTTACTTTAC 199648 ||||| || ||||| || | ||| || ||||||||||| ||| || | || |||| Sbjct 91011 GTGATAGTTTTACCAGTTAAAGTCTTAACAAAAATTTG---CATCTTTAC--TA-TTTAT 90958 Query 199649 GTATTTCTTAAAATAT 199664 |||| || ||||||| Sbjct 90957 TTATTACTAAAAATAT 90942 Score = 96.9 bits (106), Expect = 8e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | | ||| | ||||||||| || || ||||| | |||||| |||| | ||| Sbjct 92331 CGAAGACGTAAGACTAAGTGGAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTA 92272 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||| | || || || || || || ||||| || ||||| || ||| ||| Sbjct 92271 CGTCCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCT 92212 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||| || || ||| | || || | | ||| || || || Sbjct 92211 TCCTTATCTTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCAACTTCTAAA 92152 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| || | ||| || ||||||||||| Sbjct 92151 GTAATAGTTTTACCAGTTAAAGTCTTAACAAAAATTTG 92114 Score = 93.3 bits (102), Expect = 1e-13 Identities = 142/201 (71%), Gaps = 1/201 (0%) Strand=Plus/Minus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||||||||| || || ||||| | |||||| |||| | ||| | ||||||||| | || Sbjct 92541 GTGGAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCTAATTG 92482 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 || || || || || ||||| || ||||| || ||| |||||| || |||||||| Sbjct 92481 TTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTA-TCTTGAATCTT 92423 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 || || ||| | || || | | ||| || || || || || || ||||| || Sbjct 92422 AGCTTTAACATTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTAATAGTTTTACCAGT 92363 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 | ||| || ||||||||||| Sbjct 92362 TAAAGTCTTAACAAAAATTTG 92342 >seq179 Length=111796 Score = 105 bits (116), Expect = 2e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||| || ||||| || || ||||| | |||||| |||| | ||| | |||||| Sbjct 96363 AGAACAAGATGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGACCATCT 96422 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || | || || ||||| ||||| | ||| || || || || ||| ||||| || Sbjct 96423 TCTAATTGTTTACCGGCAAAGATTAAACGTTGTTGATCTGGTGGAATACCTTCCTTATCT 96482 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| || || ||| | ||||| | | ||| || || || || || ||| Sbjct 96483 TGAATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATGGTC 96542 Query 199598 TTACCCGTGAGAGTTTTCACAAAAAT 199623 ||||| ||||||||||| |||||||| Sbjct 96543 TTACCAGTGAGAGTTTTAACAAAAAT 96568 >seq53 Length=166033 Score = 84.2 bits (92), Expect = 5e-11 Identities = 133/189 (70%), Gaps = 4/189 (2%) Strand=Plus/Minus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 ||||||||| ||||||||||| | ||| | ||||||| | ||||| || ||||| | Sbjct 113403 CCTTTTGGATGTTGTAGTCAGAAAGAGTACGGTCATCTTCTAATTGCTTACCAGCGAAAA 113344 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559 | | ||| || || || || ||| ||||| || || ||||||||||| || ||| Sbjct 113343 TTAAACGTTGTTGATCTGGTGGAATACCTTCCTTTTCTTGGATCTTTTGCTTAAC--ATT 113286 Query 199560 --CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCAC 199617 | | | |||| | | ||| || || | || || ||||| || || || || || || Sbjct 113285 AACAATGCTGTCGGAAGATTCAACCTCAAGGGTTATAGTCTTTCCGGTAAGGGTCTTTAC 113226 Query 199618 AAAAATTTG 199626 |||||| || Sbjct 113225 AAAAATCTG 113217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178905966394345