Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_014662.1 Length=165540 Score E Sequences producing significant alignments: (Bits) Value seq848 96.9 4e-15 seq813 91.5 2e-13 seq795 91.5 2e-13 seq508 91.5 2e-13 seq363 91.5 2e-13 seq70 91.5 2e-13 seq3 91.5 2e-13 seq444 87.8 2e-12 seq53 87.8 2e-12 seq578 86.0 7e-12 seq257 86.0 7e-12 seq655 84.2 2e-11 seq181 84.2 2e-11 >seq848 Length=195643 Score = 96.9 bits (106), Expect = 4e-15 Identities = 133/185 (72%), Gaps = 6/185 (3%) Strand=Plus/Plus Query 61989 TTACATTTCCTTGGTGAAAGTACGTGCAATAACGTCACGCTGCTGTTCTGACGTCAGAGA 62048 |||||||| | | ||| ||||| |||||||| || || |||| || || | Sbjct 61169 TTACATTTTTTCGTGGAAGGTACGAGCAATAACTTCTTTTTGTTGTTGTGGAGTTAATTT 61228 Query 62049 ATTAAATCGGACAGCATAACCAGAAACACGAATAGTCAGCTGAGGATATTTTTCTGGATG 62108 | ||| |||||||||||||||||||||||||| || | ||||| ||||||||||| Sbjct 61229 AACAAAGTTAACAGCATAACCAGAAACACGAATAGTAAGATTTGGATAATTTTCTGGATG 61288 Query 62109 TTGAACTGCATCTTCTAAAGTTTC---TTTAGTCAGAACATTCACGTTCAGATGTTGGCC 62165 | ||||||||||||||||| |||| ||||| || || || ||||| || | Sbjct 61289 AGCCATAGCATCTTCTAAAGTTTCACGTTTA---AGAACGTTAACATTAAGATGATGAGC 61345 Query 62166 ACCTT 62170 |||| Sbjct 61346 TCCTT 61350 >seq813 Length=8282 Score = 91.5 bits (100), Expect = 2e-13 Identities = 90/115 (78%), Gaps = 6/115 (5%) Strand=Plus/Plus Query 62059 ACAGCATAACCAGAAACACGAATAGTCAGCTGAGGATATTTTTCTGGATGTTGAACTGCA 62118 ||||| |||||||||||||||||||| || | ||||| ||||||||||| | ||| Sbjct 6276 ACAGCGTAACCAGAAACACGAATAGTAAGATTTGGATAATTTTCTGGATGAGCCATAGCA 6335 Query 62119 TCTTCTAAAGTTTC---TTTAGTCAGAACATTCACGTTCAGATGTTGGCCACCTT 62170 |||||||||||||| |||| ||||| || || || ||||| || |||||| Sbjct 6336 TCTTCTAAAGTTTCACGTTTA---AGAACGTTAACATTAAGATGATGAGCACCTT 6387 >seq795 Length=9292 Score = 91.5 bits (100), Expect = 2e-13 Identities = 90/115 (78%), Gaps = 6/115 (5%) Strand=Plus/Minus Query 62059 ACAGCATAACCAGAAACACGAATAGTCAGCTGAGGATATTTTTCTGGATGTTGAACTGCA 62118 |||||||||||||||||||||||||| || | ||||| ||||||||||| | ||| Sbjct 4103 ACAGCATAACCAGAAACACGAATAGTAAGATTTGGATAATTTTCTGGATGAGCCATAGCA 4044 Query 62119 TCTTCTAAAGTTTC---TTTAGTCAGAACATTCACGTTCAGATGTTGGCCACCTT 62170 |||||||||||||| |||| || || || || || ||||| || |||||| Sbjct 4043 TCTTCTAAAGTTTCACGTTTA---AGTACGTTAACATTGAGATGATGAGCACCTT 3992 >seq508 Length=37807 Score = 91.5 bits (100), Expect = 2e-13 Identities = 116/157 (74%), Gaps = 2/157 (1%) Strand=Plus/Minus Query 62004 GAAAGTACGTGCAATAACGTCACGCTGCTGTTCTGACGTCAGAG-AATTAAATCGGACAG 62062 ||||||||| |||||||| || | || |||| || || || ||| |||| | || | Sbjct 25979 GAAAGTACGAGCAATAACTTCTCTTTGTTGTTGTGGGGTAAGTCTAATGAAAT-GAACTG 25921 Query 62063 CATAACCAGAAACACGAATAGTCAGCTGAGGATATTTTTCTGGATGTTGAACTGCATCTT 62122 ||||||||||||||||||| || | | ||||| ||||||||||| | ||||||| Sbjct 25920 CATAACCAGAAACACGAATTGTTAAGTTTGGATAATTTTCTGGATGAACCATAGCATCTT 25861 Query 62123 CTAAAGTTTCTTTAGTCAGAACATTCACGTTCAGATG 62159 |||| || |||| | | ||||| || |||| ||| Sbjct 25860 CTAATGTAGATTTATTTAATACATTAACATTCAAATG 25824 >seq363 Length=62025 Score = 91.5 bits (100), Expect = 2e-13 Identities = 90/115 (78%), Gaps = 6/115 (5%) Strand=Plus/Plus Query 62059 ACAGCATAACCAGAAACACGAATAGTCAGCTGAGGATATTTTTCTGGATGTTGAACTGCA 62118 ||||| |||||||||||||||||||| || | ||||| ||||||||||| | ||| Sbjct 40067 ACAGCGTAACCAGAAACACGAATAGTAAGATTTGGATAATTTTCTGGATGAGCCATAGCA 40126 Query 62119 TCTTCTAAAGTTTC---TTTAGTCAGAACATTCACGTTCAGATGTTGGCCACCTT 62170 |||||||||||||| |||| ||||| || || || ||||| || |||||| Sbjct 40127 TCTTCTAAAGTTTCACGTTTA---AGAACGTTAACATTAAGATGATGAGCACCTT 40178 >seq70 Length=153624 Score = 91.5 bits (100), Expect = 2e-13 Identities = 90/115 (78%), Gaps = 6/115 (5%) Strand=Plus/Minus Query 62059 ACAGCATAACCAGAAACACGAATAGTCAGCTGAGGATATTTTTCTGGATGTTGAACTGCA 62118 |||||||||||||||||||||||||| || | ||||| ||||||||||| | ||| Sbjct 120618 ACAGCATAACCAGAAACACGAATAGTAAGATTTGGATAATTTTCTGGATGAGCCATAGCA 120559 Query 62119 TCTTCTAAAGTTTC---TTTAGTCAGAACATTCACGTTCAGATGTTGGCCACCTT 62170 |||||||||||||| |||| || || || || || ||||| || |||||| Sbjct 120558 TCTTCTAAAGTTTCACGTTTA---AGTACGTTAACATTGAGATGATGAGCACCTT 120507 >seq3 Length=178593 Score = 91.5 bits (100), Expect = 2e-13 Identities = 123/171 (72%), Gaps = 8/171 (5%) Strand=Plus/Plus Query 62004 GAAAGTACGTGCAATAACGTCACGCTGCTGTTCTGACGTCAGAGAATTAAATCGGACAGC 62063 ||||||||| |||||||| || || |||| || || | | ||| ||||| Sbjct 78071 GAAAGTACGAGCAATAACTTCTTTTTGTTGTTGTGGTGTTAATTTAACAAAATTAACAGC 78130 Query 62064 ATAACCAGAAACACGAATAGTCAGCTGAGGATATTTTTCTGGATGTTGAACTGCATCTTC 62123 ||||||||| |||||||| || || | ||||| ||||||||||||| | |||||||| Sbjct 78131 ATAACCAGATACACGAATGGTAAGATTTGGATAATTTTCTGGATGTTTCATAGCATCTTC 78190 Query 62124 TAAAGTTTC----TTTAGTCAGAACATTCACGTTCAGATGTTGGCCACCTT 62170 ||| ||||| |||| | ||||| || || ||||| ||| | |||| Sbjct 78191 TAAGGTTTCACGTTTTAAT----ACATTAACATTAAGATGATGGGCTCCTT 78237 >seq444 Length=47782 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/130 (76%), Gaps = 2/130 (2%) Strand=Plus/Plus Query 62004 GAAAGTACGTGCAATAACGTCACGCTGCTGTTCTGACGTCAGA-GAATTAAATCGGACAG 62062 |||||| | |||||||| || | || || |||| | | | |||| || | | |||| Sbjct 5159 GAAAGTTCTAGCAATAACTTCTCTTTGTTGGTCTGGAGATAAACGAATGAAGT-GAACAG 5217 Query 62063 CATAACCAGAAACACGAATAGTCAGCTGAGGATATTTTTCTGGATGTTGAACTGCATCTT 62122 |||||||||||||||||||||| | | ||||| ||||||||||| | ||||||| Sbjct 5218 CATAACCAGAAACACGAATAGTTAAGTTTGGATACTTTTCTGGATGAACCATAGCATCTT 5277 Query 62123 CTAAAGTTTC 62132 |||||||||| Sbjct 5278 CTAAAGTTTC 5287 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/130 (76%), Gaps = 2/130 (2%) Strand=Plus/Plus Query 62004 GAAAGTACGTGCAATAACGTCACGCTGCTGTTCTGACGTCAGA-GAATTAAATCGGACAG 62062 |||||| | ||||||||| || | || || || | | | |||| |||| | |||| Sbjct 17342 GAAAGTTCTTGCAATAACTTCTCTTTGTTGACTTGGAGATAAACGAATGAAAT-GTACAG 17400 Query 62063 CATAACCAGAAACACGAATAGTCAGCTGAGGATATTTTTCTGGATGTTGAACTGCATCTT 62122 |||| ||||||||||||||||| | | ||||| |||||||||||| | ||||||| Sbjct 17401 CATATCCAGAAACACGAATAGTTAAATTTGGATAATTTTCTGGATGTACCATAGCATCTT 17460 Query 62123 CTAAAGTTTC 62132 |||||||||| Sbjct 17461 CTAAAGTTTC 17470 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/130 (76%), Gaps = 2/130 (2%) Strand=Plus/Minus Query 62004 GAAAGTACGTGCAATAACGTCACGCTGCTGTTCTGACGTCAGA-GAATTAAATCGGACAG 62062 |||||| | ||||||||| || | || || || | | | |||| |||| | |||| Sbjct 44282 GAAAGTTCTTGCAATAACTTCTCTTTGTTGACTTGGTGATAAACGAATGAAAT-GTACAG 44224 Query 62063 CATAACCAGAAACACGAATAGTCAGCTGAGGATATTTTTCTGGATGTTGAACTGCATCTT 62122 |||| ||||||||||||||||| | | ||||| |||||||||||| | ||||||| Sbjct 44223 CATATCCAGAAACACGAATAGTTAAATTTGGATAATTTTCTGGATGTACCATAGCATCTT 44164 Query 62123 CTAAAGTTTC 62132 |||||||||| Sbjct 44163 CTAAAGTTTC 44154 >seq53 Length=166033 Score = 87.8 bits (96), Expect = 2e-12 Identities = 88/113 (78%), Gaps = 6/113 (5%) Strand=Plus/Minus Query 62059 ACAGCATAACCAGAAACACGAATAGTCAGCTGAGGATATTTTTCTGGATGTTGAACTGCA 62118 |||||||||||||||||||||||||| || | ||||| |||||||| || | ||| Sbjct 3232 ACAGCATAACCAGAAACACGAATAGTAAGGTTTGGATAGTTTTCTGGGTGAGCCATAGCA 3173 Query 62119 TCTTCTAAAGTTTC---TTTAGTCAGAACATTCACGTTCAGATGTTGGCCACC 62168 |||||||||||||| |||| ||||| || || || ||||| || |||| Sbjct 3172 TCTTCTAAAGTTTCACGTTTA---AGAACGTTAACATTAAGATGATGAGCACC 3123 >seq578 Length=26404 Score = 86.0 bits (94), Expect = 7e-12 Identities = 84/107 (79%), Gaps = 6/107 (6%) Strand=Plus/Plus Query 62059 ACAGCATAACCAGAAACACGAATAGTCAGCTGAGGATATTTTTCTGGATGTTGAACTGCA 62118 |||||||||||||||||||||||||| || | ||||| |||||||| || | ||| Sbjct 14640 ACAGCATAACCAGAAACACGAATAGTAAGGTTTGGATAGTTTTCTGGGTGAGCCATAGCA 14699 Query 62119 TCTTCTAAAGTTTC---TTTAGTCAGAACATTCACGTTCAGATGTTG 62162 |||||||||||||| |||| ||||| || || || ||||| || Sbjct 14700 TCTTCTAAAGTTTCACGTTTA---AGAACGTTAACATTAAGATGATG 14743 >seq257 Length=87443 Score = 86.0 bits (94), Expect = 7e-12 Identities = 84/107 (79%), Gaps = 6/107 (6%) Strand=Plus/Plus Query 62059 ACAGCATAACCAGAAACACGAATAGTCAGCTGAGGATATTTTTCTGGATGTTGAACTGCA 62118 |||||||||||||||||||||||||| || | ||||| |||||||| || | ||| Sbjct 75086 ACAGCATAACCAGAAACACGAATAGTAAGGTTTGGATAGTTTTCTGGGTGAGCCATAGCA 75145 Query 62119 TCTTCTAAAGTTTC---TTTAGTCAGAACATTCACGTTCAGATGTTG 62162 |||||||||||||| |||| ||||| || || || ||||| || Sbjct 75146 TCTTCTAAAGTTTCACGTTTA---AGAACGTTAACATTAAGATGATG 75189 >seq655 Length=18247 Score = 84.2 bits (92), Expect = 2e-11 Identities = 71/86 (83%), Gaps = 1/86 (1%) Strand=Plus/Plus Query 62047 GAATTAAATCGGACAGCATAACCAGAAACACGAATAGTCAGCTGAGGATATTTTTCTGGA 62106 |||| |||| | |||||||| ||||||||||||||||| | | ||||| ||||||||| Sbjct 664 GAATGAAAT-GTACAGCATATCCAGAAACACGAATAGTTAAATTTGGATAATTTTCTGGA 722 Query 62107 TGTTGAACTGCATCTTCTAAAGTTTC 62132 ||| | ||||||||||||||||| Sbjct 723 TGTACCATAGCATCTTCTAAAGTTTC 748 >seq181 Length=111586 Score = 84.2 bits (92), Expect = 2e-11 Identities = 71/86 (83%), Gaps = 1/86 (1%) Strand=Plus/Minus Query 62047 GAATTAAATCGGACAGCATAACCAGAAACACGAATAGTCAGCTGAGGATATTTTTCTGGA 62106 |||| |||| | |||||||| ||||||||||||||||| | | ||||| ||||||||| Sbjct 106375 GAATGAAAT-GTACAGCATATCCAGAAACACGAATAGTTAAATTTGGATAATTTTCTGGA 106317 Query 62107 TGTTGAACTGCATCTTCTAAAGTTTC 62132 ||| | ||||||||||||||||| Sbjct 106316 TGTACCATAGCATCTTCTAAAGTTTC 106291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 529593148300000