Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_015251.1 Length=235229 Score E Sequences producing significant alignments: (Bits) Value seq508 113 7e-20 seq3 105 1e-17 seq82 96.9 5e-15 seq444 91.5 2e-13 seq181 87.8 3e-12 seq848 84.2 3e-11 seq655 84.2 3e-11 >seq508 Length=37807 Score = 113 bits (124), Expect = 7e-20 Identities = 120/156 (77%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 27988 AAAGTACGAGAAACAACATCGCGTTGTTGTTCTGGGGTTAGAG-AATTAAATCTAACGGC 28046 |||||||||| || ||| || | |||||||| |||||| || ||| |||| ||| || Sbjct 25978 AAAGTACGAGCAATAACTTCTCTTTGTTGTTGTGGGGTAAGTCTAATGAAATG-AACTGC 25920 Query 28047 ATAACCAGATACTCGAATTGTCAATTGTGGGTATTTTTCTGGAAATTTAATTGCATCTTC 28106 ||||||||| || |||||||| || | ||| || ||||||||| || |||||||| Sbjct 25919 ATAACCAGAAACACGAATTGTTAAGTTTGGATAATTTTCTGGATGAACCATAGCATCTTC 25860 Query 28107 TAAAGTTTCTTTATTCAAGACATTTACATTTAAATG 28142 ||| || |||||| || ||||| ||||| ||||| Sbjct 25859 TAATGTAGATTTATTTAATACATTAACATTCAAATG 25824 >seq3 Length=178593 Score = 105 bits (116), Expect = 1e-17 Identities = 123/166 (74%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 27988 AAAGTACGAGAAACAACATCGCGTTGTTGTTCTGGGGTTAGAGAATTAAATCTAACGGCA 28047 |||||||||| || ||| || |||||||| ||| |||| | ||| |||| ||| Sbjct 78072 AAAGTACGAGCAATAACTTCTTTTTGTTGTTGTGGTGTTAATTTAACAAAATTAACAGCA 78131 Query 28048 TAACCAGATACTCGAATTGTCAATTGTGGGTATTTTTCTGGAAATTTAATTGCATCTTCT 28107 ||||||||||| ||||| || | | ||| || ||||||||| ||| || ||||||||| Sbjct 78132 TAACCAGATACACGAATGGTAAGATTTGGATAATTTTCTGGATGTTTCATAGCATCTTCT 78191 Query 28108 AAAGTTTCTTTATTCAAGACATTTACATTTAAATGTTGACCCCCTT 28153 || ||||| || || ||||| ||||| | ||| || | |||| Sbjct 78192 AAGGTTTCACGTTTTAATACATTAACATTAAGATGATGGGCTCCTT 78237 >seq82 Length=363466 Score = 96.9 bits (106), Expect = 5e-15 Identities = 121/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 27988 AAAGTACGAGAAACAACATCGCGTTGTTGTTCTGGGGTTAGAGAATTAAATCTAACGGCA 28047 |||||||||| || ||| || |||||||| ||| |||| | ||| |||| ||| Sbjct 336834 AAAGTACGAGCAATAACTTCTTTTTGTTGTTGTGGTGTTAATTTAACAAAATTAACAGCA 336775 Query 28048 TAACCAGATACTCGAATTGTCAATTGTGGGTATTTTTCTGGAAATTTAATTGCATCTTCT 28107 || || ||||| |||||||| | | ||| || ||||||||| | || ||||||||| Sbjct 336774 TATCCTGATACACGAATTGTAAGATTTGGATAATTTTCTGGATGTGCCATAGCATCTTCT 336715 Query 28108 AAAGTTTCTTTATTCAAGACATTTACATTTAAATGTTGACCCCCTT 28153 || ||||| || || ||||| ||||| | ||| ||| | |||| Sbjct 336714 AATGTTTCACGTTTTAAAACATTAACATTAAGATGATGAGCTCCTT 336669 Score = 96.9 bits (106), Expect = 5e-15 Identities = 121/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 27988 AAAGTACGAGAAACAACATCGCGTTGTTGTTCTGGGGTTAGAGAATTAAATCTAACGGCA 28047 |||||||||| || ||| || |||||||| ||| |||| | ||| |||| ||| Sbjct 344237 AAAGTACGAGCAATAACTTCTTTTTGTTGTTGTGGTGTTAATTTAACAAAATTAACAGCA 344296 Query 28048 TAACCAGATACTCGAATTGTCAATTGTGGGTATTTTTCTGGAAATTTAATTGCATCTTCT 28107 || || ||||| |||||||| | | ||| || ||||||||| | || ||||||||| Sbjct 344297 TATCCTGATACACGAATTGTAAGATTTGGATAATTTTCTGGATGTGCCATAGCATCTTCT 344356 Query 28108 AAAGTTTCTTTATTCAAGACATTTACATTTAAATGTTGACCCCCTT 28153 || ||||| || || ||||| ||||| | ||| ||| | |||| Sbjct 344357 AATGTTTCACGTTTTAAAACATTAACATTAAGATGATGAGCTCCTT 344402 Score = 96.9 bits (106), Expect = 5e-15 Identities = 121/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 27988 AAAGTACGAGAAACAACATCGCGTTGTTGTTCTGGGGTTAGAGAATTAAATCTAACGGCA 28047 |||||||||| || ||| || |||||||| ||| |||| | ||| |||| ||| Sbjct 351737 AAAGTACGAGCAATAACTTCTTTTTGTTGTTGTGGTGTTAATTTAACAAAATTAACAGCA 351678 Query 28048 TAACCAGATACTCGAATTGTCAATTGTGGGTATTTTTCTGGAAATTTAATTGCATCTTCT 28107 || || ||||| |||||||| | | ||| || ||||||||| | || ||||||||| Sbjct 351677 TATCCTGATACACGAATTGTAAGATTTGGATAATTTTCTGGATGTGCCATAGCATCTTCT 351618 Query 28108 AAAGTTTCTTTATTCAAGACATTTACATTTAAATGTTGACCCCCTT 28153 || ||||| || || ||||| ||||| | ||| ||| | |||| Sbjct 351617 AATGTTTCACGTTTTAAAACATTAACATTAAGATGATGAGCTCCTT 351572 Score = 93.3 bits (102), Expect = 6e-14 Identities = 120/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 27988 AAAGTACGAGAAACAACATCGCGTTGTTGTTCTGGGGTTAGAGAATTAAATCTAACGGCA 28047 |||||||||| || ||| || |||||||| ||| |||| | ||| |||| ||| Sbjct 329309 AAAGTACGAGCAATAACTTCTTTTTGTTGTTGTGGTGTTAATTTAACAAAATTAACAGCA 329368 Query 28048 TAACCAGATACTCGAATTGTCAATTGTGGGTATTTTTCTGGAAATTTAATTGCATCTTCT 28107 || || ||||| || ||||| | | ||| || ||||||||| | || ||||||||| Sbjct 329369 TATCCTGATACACGGATTGTAAGATTTGGATAATTTTCTGGATGTGCCATAGCATCTTCT 329428 Query 28108 AAAGTTTCTTTATTCAAGACATTTACATTTAAATGTTGACCCCCTT 28153 || ||||| || || ||||| ||||| | ||| ||| | |||| Sbjct 329429 AATGTTTCACGTTTTAAAACATTAACATTAAGATGATGAGCTCCTT 329474 >seq444 Length=47782 Score = 91.5 bits (100), Expect = 2e-13 Identities = 122/167 (73%), Gaps = 2/167 (1%) Strand=Plus/Plus Query 27988 AAAGTACGAGAAACAACATCGCGTTGTTGTTCTGGGGTTAGA-GAATTAAATCTAACGGC 28046 ||||| | || || ||| || | |||||| ||||| | || | |||| || | ||| || Sbjct 5160 AAAGTTCTAGCAATAACTTCTCTTTGTTGGTCTGGAGATAAACGAATGAAGTG-AACAGC 5218 Query 28047 ATAACCAGATACTCGAATTGTCAATTGTGGGTATTTTTCTGGAAATTTAATTGCATCTTC 28106 ||||||||| || ||||| || || | ||| || ||||||||| || |||||||| Sbjct 5219 ATAACCAGAAACACGAATAGTTAAGTTTGGATACTTTTCTGGATGAACCATAGCATCTTC 5278 Query 28107 TAAAGTTTCTTTATTCAAGACATTTACATTTAAATGTTGACCCCCTT 28153 ||||||||| | || ||||| |||||||| || ||| |||| Sbjct 5279 TAAAGTTTCACGAACTAAAACATTAACATTTAAGTGGAAACCACCTT 5325 Score = 86.0 bits (94), Expect = 9e-12 Identities = 114/156 (73%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 27988 AAAGTACGAGAAACAACATCGCGTTGTTGTTCTGGGGTTAGA-GAATTAAATCTAACGGC 28046 ||||| | | || ||| || | |||||| ||| | || | |||| |||| || | || Sbjct 17343 AAAGTTCTTGCAATAACTTCTCTTTGTTGACTTGGAGATAAACGAATGAAATGTA-CAGC 17401 Query 28047 ATAACCAGATACTCGAATTGTCAATTGTGGGTATTTTTCTGGAAATTTAATTGCATCTTC 28106 ||| ||||| || ||||| || || | ||| || ||||||||| | || |||||||| Sbjct 17402 ATATCCAGAAACACGAATAGTTAAATTTGGATAATTTTCTGGATGTACCATAGCATCTTC 17461 Query 28107 TAAAGTTTCTTTATTCAAGACATTTACATTTAAATG 28142 ||||||||| | || ||||| ||||||||||| Sbjct 17462 TAAAGTTTCACGAACTAAAACATTAACATTTAAATG 17497 Score = 86.0 bits (94), Expect = 9e-12 Identities = 114/156 (73%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 27988 AAAGTACGAGAAACAACATCGCGTTGTTGTTCTGGGGTTAGA-GAATTAAATCTAACGGC 28046 ||||| | | || ||| || | |||||| ||| | || | |||| |||| || | || Sbjct 44281 AAAGTTCTTGCAATAACTTCTCTTTGTTGACTTGGTGATAAACGAATGAAATGTA-CAGC 44223 Query 28047 ATAACCAGATACTCGAATTGTCAATTGTGGGTATTTTTCTGGAAATTTAATTGCATCTTC 28106 ||| ||||| || ||||| || || | ||| || ||||||||| | || |||||||| Sbjct 44222 ATATCCAGAAACACGAATAGTTAAATTTGGATAATTTTCTGGATGTACCATAGCATCTTC 44163 Query 28107 TAAAGTTTCTTTATTCAAGACATTTACATTTAAATG 28142 ||||||||| | || ||||| ||||||||||| Sbjct 44162 TAAAGTTTCACGAACTAAAACATTAACATTTAAATG 44127 >seq181 Length=111586 Score = 87.8 bits (96), Expect = 3e-12 Identities = 108/145 (74%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 27999 AACAACATCGCGTTGTTGTTCTGGGGTTAGA-GAATTAAATCTAACGGCATAACCAGATA 28057 || ||| || | |||||| ||||| || | |||| |||| || | ||||| || || | Sbjct 87626 AATAACTTCTCTTTGTTGACTTGGGGATAAACGAATGAAATGTA-CAGCATATCCTGAAA 87684 Query 28058 CTCGAATTGTCAATTGTGGGTATTTTTCTGGAAATTTAATTGCATCTTCTAAAGTTTCTT 28117 | |||||||| || | ||| || ||||||||| | || ||||||||||||||||| Sbjct 87685 CACGAATTGTTAAATTTGGATAATTTTCTGGATGTACCATAGCATCTTCTAAAGTTTCAC 87744 Query 28118 TATTCAAGACATTTACATTTAAATG 28142 | || ||||| ||||||||||| Sbjct 87745 GAACTAAAACATTAACATTTAAATG 87769 Score = 84.2 bits (92), Expect = 3e-11 Identities = 107/145 (74%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 27999 AACAACATCGCGTTGTTGTTCTGGGGTTAGA-GAATTAAATCTAACGGCATAACCAGATA 28057 || ||| || | |||||| ||| | || | |||| |||| || | ||||| ||||| | Sbjct 106407 AATAACTTCTCTTTGTTGACTTGGTGATAAACGAATGAAATGTA-CAGCATATCCAGAAA 106349 Query 28058 CTCGAATTGTCAATTGTGGGTATTTTTCTGGAAATTTAATTGCATCTTCTAAAGTTTCTT 28117 | ||||| || || | ||| || ||||||||| | || ||||||||||||||||| Sbjct 106348 CACGAATAGTTAAATTTGGATAATTTTCTGGATGTACCATAGCATCTTCTAAAGTTTCAC 106289 Query 28118 TATTCAAGACATTTACATTTAAATG 28142 | || ||||| ||||||||||| Sbjct 106288 GAACTAAAACATTAACATTTAAATG 106264 >seq848 Length=195643 Score = 84.2 bits (92), Expect = 3e-11 Identities = 118/166 (71%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 27988 AAAGTACGAGAAACAACATCGCGTTGTTGTTCTGGGGTTAGAGAATTAAATCTAACGGCA 28047 || ||||||| || ||| || |||||||| ||| |||| | ||| |||| ||| Sbjct 61185 AAGGTACGAGCAATAACTTCTTTTTGTTGTTGTGGAGTTAATTTAACAAAGTTAACAGCA 61244 Query 28048 TAACCAGATACTCGAATTGTCAATTGTGGGTATTTTTCTGGAAATTTAATTGCATCTTCT 28107 |||||||| || ||||| || | | ||| || ||||||||| || ||||||||| Sbjct 61245 TAACCAGAAACACGAATAGTAAGATTTGGATAATTTTCTGGATGAGCCATAGCATCTTCT 61304 Query 28108 AAAGTTTCTTTATTCAAGACATTTACATTTAAATGTTGACCCCCTT 28153 |||||||| || | || || ||||| | ||| ||| | |||| Sbjct 61305 AAAGTTTCACGTTTAAGAACGTTAACATTAAGATGATGAGCTCCTT 61350 >seq655 Length=18247 Score = 84.2 bits (92), Expect = 3e-11 Identities = 107/145 (74%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 27999 AACAACATCGCGTTGTTGTTCTGGGGTTAGA-GAATTAAATCTAACGGCATAACCAGATA 28057 || ||| || | |||||| ||| | || | |||| |||| || | ||||| ||||| | Sbjct 632 AATAACTTCTCTTTGTTGACTTGGTGATAAACGAATGAAATGTA-CAGCATATCCAGAAA 690 Query 28058 CTCGAATTGTCAATTGTGGGTATTTTTCTGGAAATTTAATTGCATCTTCTAAAGTTTCTT 28117 | ||||| || || | ||| || ||||||||| | || ||||||||||||||||| Sbjct 691 CACGAATAGTTAAATTTGGATAATTTTCTGGATGTACCATAGCATCTTCTAAAGTTTCAC 750 Query 28118 TATTCAAGACATTTACATTTAAATG 28142 | || ||||| ||||||||||| Sbjct 751 GAACTAAAACATTAACATTTAAATG 775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 752595063175400