Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq615 100 4e-16 seq259 96.9 5e-15 seq191 84.2 3e-11 >seq615 Length=217977 Score = 100 bits (110), Expect = 4e-16 Identities = 140/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 104931 TATGGAATGATAATGGTTCACGTAAGTTTTTAGATTCTTGTGGATTTCACTT-TCGAAAA 104989 ||||| | | ||||||||| ||| | ||| | ||| ||| ||| || | || | Sbjct 39869 TATGGGAAGGTAATGGTTCCCGTGAATTTCTTGATAAAATTGG-TTTAACAGATAGAGAG 39811 Query 104990 GAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCTGGAGCTCAATATATC 105049 |||||||||||||||||||| ||||| | |||||| | ||| ||| ||| ||||| | Sbjct 39810 GAAGGTGATTTAGGACCAATATATGGTTGGCAATGGCGTCATTTTGGTGCTAAATATGTA 39751 Query 105050 GACTGTGATACCGACTATACCGGCCAAGGTATAGACCAATTAAGTCAAGTTATAGAAACT 105109 || ||| |||| || ||||| || ||||| | ||| ||| | || | ||||| || | Sbjct 39750 GATTGTCATACAGATTATACAGGTCAAGGAAAAGATCAACTTCGTGATGTTATTGACAAA 39691 Query 105110 ATAAAAAATAACCC 105123 || | |||||| || Sbjct 39690 ATTATAAATAATCC 39677 >seq259 Length=461915 Score = 96.9 bits (106), Expect = 5e-15 Identities = 200/293 (68%), Gaps = 6/293 (2%) Strand=Plus/Minus Query 126913 GTGGTTTTACTGGAAGAAGGATAAAGAGTAAA-ATTTTTATAGGTCCAACATACTATCAT 126971 ||||| ||||||| ||| || | || | | || ||| | |||||| | |||||| Sbjct 207357 GTGGTATTACTGGT-GAACCATTAGAAGCATATATCTTTTTTGGTCCAGTTTTCTATCAA 207299 Query 126972 CGTCTTAAACATATGGTTAAAGATAAAATGCATGCTAGAAGTCATGGTCAAGTAACAACA 127031 ||| | ||||| ||||| ||||||||||||||||||| || |||| || | Sbjct 207298 CGTTTAAAACACATGGTATTAGATAAAATGCATGCTAGATCTCGTGGTAAACGTGCTGTT 207239 Query 127032 TTACATCGTCAACCAAACTGTGGTCGTTCCCAAGG--TGGTGGATTAAGATTTGGAGAAA 127089 ||| | | ||||||| ||||||| ||||| |||||| | | | || |||| Sbjct 207238 TTAACTAGACAACCAACAGAAGGTCGTT--CAAGGGATGGTGGTCTTCGTGTAGGTGAAA 207181 Query 127090 TGGAAAAAGATTGTATTTTGGTTCATGGAGCCACACAATTTTTAAATGAAAGAATGTTTT 127149 ||||| |||||| | | | |||||| || | | || |||| |||||| | | | Sbjct 207180 TGGAACGTGATTGTTTAATTGGTCATGGTGCTAGTAATTTATTAATGGAAAGATTAATGT 207121 Query 127150 TATGTTCAGATCCTTTTCAAATTGATGTGTGTACAAATTGTGGAATGATTAGT 127202 | || ||| ||||| |||||||||| ||| | ||||||| ||||| || Sbjct 207120 TTAGTAGTGATGCTTTTGAAATTGATGTTTGTCAAGATTGTGGTTTGATTGGT 207068 >seq191 Length=109312 Score = 84.2 bits (92), Expect = 3e-11 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 182996 TACAATGCAGATTTTGATGGAGATGAAATGAATTTACATGTTCCTCAGTCGTATGAAGCT 183055 || ||||||||||||||||| |||||||||||||||||||| || || || |||||| || Sbjct 20450 TATAATGCAGATTTTGATGGTGATGAAATGAATTTACATGTACCACAATCATATGAAACT 20391 Query 183056 ACCGCTGAA 183064 | |||||| Sbjct 20390 AGAGCTGAA 20382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658394681908600