Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq172 100 2e-16 seq179 98.7 8e-16 seq748 96.9 3e-15 seq304 86.0 5e-12 seq53 82.4 6e-11 >seq172 Length=114120 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || || |||||||| || || |||||||||||||| |||||||| ||| | || Sbjct 113144 AGACGTAAGACCAAATGGAGTGTAGATTCTTTTTGAATATTATAATCAGAAAGAGTACGT 113085 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || || |||||||| ||||| || || || ||||| || | |||| || ||| Sbjct 113084 CCATCTTCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGGTCTGGAGGAATACCTTCC 113025 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| ||| ||| | | || || || | || || || | || Sbjct 113024 TTGTCTTGAATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGATTCTACTTCTAAGGTG 112965 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || ||||| || ||||| || || ||||| Sbjct 112964 ATAGTCTTACCAGTCAAGGTCTTTACGAAGATTTGCAT 112927 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || || |||||||| || || |||||||||||||| |||||||| ||| | || Sbjct 113600 AGACGTAAGACCAAATGGAGTGTAGATTCTTTTTGAATATTATAATCAGAAAGAGTACGT 113541 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || || |||||||| ||||| || || || ||||| || | |||| || ||| Sbjct 113540 CCATCTTCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGGTCTGGAGGAATACCTTCC 113481 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| ||| ||| | | || || || | || || || | || Sbjct 113480 TTGTCTTGAATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGATTCTACTTCTAAGGTG 113421 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || ||||| || ||||| || || ||||| Sbjct 113420 ATAGTCTTACCAGTCAAGGTCTTTACGAAGATTTGCAT 113383 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 |||||||||||||| |||||||| ||| | || | || || || |||||||| ||||| Sbjct 112889 TCTTTTTGAATATTATAATCAGAAAGAGTACGTCCATCTTCTAATTGCTTACCAGCAAAA 112830 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 || || || ||||| || | |||| || |||||||| |||||| ||| ||| Sbjct 112829 ATAAGACGTTGTTGGTCTGGAGGAATTCCTTCCTTGTCTTGAATCTTAGCTTTGACATTT 112770 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | || || || | || || || | || || || || || || ||||| ||||| Sbjct 112769 TCAATAGTGTCAGAAGATTCTACTTCTAAGGTGATAGTCTTACCAGTTAAAGTCTTTACG 112710 Query 48756 AAAATCTGCAT 48766 || || ||||| Sbjct 112709 AAGATTTGCAT 112699 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 |||||||||||||| |||||||| ||| | || | || || || |||||||| ||||| Sbjct 113345 TCTTTTTGAATATTATAATCAGAAAGAGTACGTCCATCTTCTAATTGCTTACCAGCAAAA 113286 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 || || || ||||| || | |||| || ||||| || |||||| ||| || Sbjct 113285 ATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATCTTGAATCTTAGCTTTAACGTTT 113226 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | || || || | || || || | || || || || || |||||||| ||||| Sbjct 113225 TCAATAGTGTCAGAAGATTCTACTTCTAAGGTGATAGTCTTACCAGTCAAAGTCTTTACG 113166 Query 48756 AAAATCTGCAT 48766 || || ||||| Sbjct 113165 AAGATTTGCAT 113155 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 |||||||||||||| |||||||| ||| | || | || || || |||||||| ||||| Sbjct 113801 TCTTTTTGAATATTATAATCAGAAAGAGTACGTCCATCTTCTAATTGCTTACCAGCAAAA 113742 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 || || || ||||| || | |||| || ||||| || |||||| ||| || Sbjct 113741 ATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATCTTGAATCTTAGCTTTAACGTTT 113682 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | || || || | || || || | || || || || || |||||||| ||||| Sbjct 113681 TCAATAGTGTCAGAAGATTCTACTTCTAAGGTGATAGTCTTACCAGTCAAAGTCTTTACG 113622 Query 48756 AAAATCTGCAT 48766 || || ||||| Sbjct 113621 AAGATTTGCAT 113611 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 |||||||||||||| |||||||| ||| | || | || || || |||||||| ||||| Sbjct 114029 TCTTTTTGAATATTATAATCAGAAAGAGTACGTCCATCTTCTAATTGCTTACCAGCAAAA 113970 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 || || || |||||||| | |||| || ||||| || ||| || ||| ||| Sbjct 113969 ATAAGACGTTGTTGATCTGGAGGAATACCTTCCTTATCTTGAATTTTAGCTTTGACATTT 113910 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | || || || | || || || | || || || || || ||||| || ||||| Sbjct 113909 TCAATAGTGTCAGAAGATTCTACTTCTAAGGTGATAGTCTTACCAGTCAAGGTCTTTACG 113850 Query 48756 AAAATCTGCAT 48766 || || ||||| Sbjct 113849 AAGATTTGCAT 113839 >seq179 Length=111796 Score = 98.7 bits (108), Expect = 8e-16 Identities = 134/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 ||||||||||| ||||||||||| ||| | ||| | || || || || ||||||||||| Sbjct 96384 TCTTTTTGAATGTTGTAATCAGAAAGAGTACGACCATCTTCTAATTGTTTACCGGCAAAG 96443 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 || | || |||||||| | |||| || ||||| || |||||| ||| ||| Sbjct 96444 ATTAAACGTTGTTGATCTGGTGGAATACCTTCCTTATCTTGAATCTTAGCTTTGACATTT 96503 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | || || || | || || || | ||||| || || || || | |||||| ||| Sbjct 96504 TCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATGGTCTTACCAGTGAGAGTTTTAACA 96563 Query 48756 AAAATCT 48762 ||||||| Sbjct 96564 AAAATCT 96570 >seq748 Length=202608 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 ||||||||||| ||||||||||| ||| | || | || || || || ||||| ||||| Sbjct 92301 TCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAA 92242 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 || || || ||||| || | |||| || ||||| || |||||| ||| ||| Sbjct 92241 ATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATCTTGAATCTTAGCTTTAACATTT 92182 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | || || || | || || || | ||||| ||||| || || ||||| || ||| Sbjct 92181 TCAATAGTATCAGAAGATTCAACTTCTAAAGTAATAGTTTTACCAGTTAAAGTCTTAACA 92122 Query 48756 AAAATCTGCAT 48766 ||||| ||||| Sbjct 92121 AAAATTTGCAT 92111 Score = 95.1 bits (104), Expect = 9e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 ||||||||||| ||||||||||| ||| | || | || || || || ||||| ||||| Sbjct 91161 TCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAA 91102 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 || || || ||||| || | |||| || ||||| || |||||| ||| ||| Sbjct 91101 ATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATCTTGAATCTTAGCTTTGACATTT 91042 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | || || || | || || || | || || ||||| || || ||||| || ||| Sbjct 91041 TCAATAGTATCAGAAGATTCAACTTCTAAAGTGATAGTTTTACCAGTTAAAGTCTTAACA 90982 Query 48756 AAAATCTGCATC 48767 ||||| |||||| Sbjct 90981 AAAATTTGCATC 90970 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/191 (71%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 ||||||||||| ||||||||||| ||| | || | || || || || ||||| ||||| Sbjct 92528 TCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAA 92469 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 || || || ||||| || | |||| ||| ||| || |||||| ||| ||| Sbjct 92468 ATAAGACGTTGTTGGTCTGGTGGAA-TACCTTCTTATCTTGAATCTTAGCTTTAACATTT 92410 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | || || || | || || || | ||||| ||||| || || ||||| || ||| Sbjct 92409 TCAATAGTATCAGAAGATTCAACTTCTAAAGTAATAGTTTTACCAGTTAAAGTCTTAACA 92350 Query 48756 AAAATCTGCAT 48766 ||||| ||||| Sbjct 92349 AAAATTTGCAT 92339 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 ||||||||||| ||||||||||| ||| | || | || || || || ||||| ||||| Sbjct 91389 TCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAA 91330 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 || || || ||||| || | |||| || || || || |||||| ||| ||| Sbjct 91329 ATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATCTTGAATCTTAGCTTTGACATTT 91270 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | | || || | || || || | ||||| ||||| || || ||||| || ||| Sbjct 91269 TCAATGGTATCAGAAGATTCTACTTCTAAAGTAATAGTTTTACCAGTTAAAGTCTTAACA 91210 Query 48756 AAAATCTGCAT 48766 ||||| ||||| Sbjct 91209 AAAATTTGCAT 91199 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 ||||||||||| ||||||||||| ||| | || | || || || || ||||| ||||| Sbjct 91845 TCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAA 91786 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 || || || ||||| || | |||| || || || || |||||| ||| ||| Sbjct 91785 ATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATCTTGAATCTTAGCTTTGACATTT 91726 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | | || || | || || || | ||||| ||||| || || ||||| || ||| Sbjct 91725 TCAATGGTATCAGAAGATTCTACTTCTAAAGTAATAGTTTTACCAGTTAAAGTCTTAACA 91666 Query 48756 AAAATCTGCAT 48766 ||||| ||||| Sbjct 91665 AAAATTTGCAT 91655 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 ||||||||||| ||||||||||| ||| | || | || || || || ||||| ||||| Sbjct 92073 TCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAA 92014 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 || || || ||||| || | |||| || ||||| || |||||| ||| ||| Sbjct 92013 ATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATCTTGAATCTTAGCTTTAACATTT 91954 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | || || || | || || || | || || || || || || ||||| || ||| Sbjct 91953 TCAATAGTATCAGAAGATTCTACTTCTAAAGTGATAGTCTTACCAGTTAAAGTCTTAACA 91894 Query 48756 AAAATCTGCAT 48766 ||||| ||||| Sbjct 91893 AAAATTTGCAT 91883 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 ||||||||||| ||||||||||| ||| | || | || || || || ||||| ||||| Sbjct 91617 TCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAA 91558 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 || || || ||||| || | |||| || || || || |||||| ||| ||| Sbjct 91557 ATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATCTTGAATCTTAGCTTTAACATTT 91498 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | || || || | || || || | || || || || || || ||||| || ||| Sbjct 91497 TCAATAGTATCAGAAGATTCAACTTCTAAAGTGATAGTCTTACCAGTTAAAGTCTTAACA 91438 Query 48756 AAAATCTGCAT 48766 ||||| ||||| Sbjct 91437 AAAATTTGCAT 91427 >seq304 Length=284809 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || |||||||| ||||| ||||| ||| | ||| | || || || ||||||||||| || Sbjct 189537 TCCTTTTGAATGTTGTAGTCAGAAAGAGTACGACCATCTTCTAATTGCTTACCGGCGAAG 189596 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 || || || ||||| || | || | || ||||| || ||||| ||| ||| Sbjct 189597 ATAAGACGTTGTTGGTCTGGTGGGATACCTTCCTTATCTTGGATCTTAGCTTTGACATTT 189656 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | || || || | || ||||| | ||||| || || ||||| | ||||| ||| Sbjct 189657 TCAATAGTGTCGGAGGATTCAACCTCAAGGGTAATGGTCTTACCCGTAAGGGTTTTGACA 189716 Query 48756 AAAATCTGCATC 48767 || || |||||| Sbjct 189717 AAGATTTGCATC 189728 >seq53 Length=166033 Score = 82.4 bits (90), Expect = 6e-11 Identities = 129/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 48579 TTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATC 48638 ||||| || ||||| ||||| ||| | || || || || || |||||||| || || || Sbjct 113401 TTTTGGATGTTGTAGTCAGAAAGAGTACGGTCATCTTCTAATTGCTTACCAGCGAAAATT 113342 Query 48639 AGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCC 48698 | || |||||||| | |||| || ||||| || |||||||| || ||| | | Sbjct 113341 AAACGTTGTTGATCTGGTGGAATACCTTCCTTTTCTTGGATCTTTTGCTTAACATTAACA 113282 Query 48699 ACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAA 48758 | || || | || ||||| | || || || ||||| || | || ||||||||| Sbjct 113281 ATGCTGTCGGAAGATTCAACCTCAAGGGTTATAGTCTTTCCGGTAAGGGTCTTTACAAAA 113222 Query 48759 ATCTG 48763 ||||| Sbjct 113221 ATCTG 113217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380932794829305