Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_019398.1 Length=178193 Score E Sequences producing significant alignments: (Bits) Value seq444 84.2 2e-11 >seq444 Length=47782 Score = 84.2 bits (92), Expect = 2e-11 Identities = 132/184 (72%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 51004 AAGGTGGACAACACTTAAACGTAAACGTGTTGCGCCGCGAAACTCTGGAAGATGCTGTGA 51063 ||||||| |||||||| || || || || || |||||| | ||||||||| || Sbjct 5325 AAGGTGGTTTCCACTTAAATGTTAATGTTTTAGTTCGTGAAACTTTAGAAGATGCTATGG 5266 Query 51064 AGCATCCAGAAAAATACCCACAGTTAACGATCCGTGTGTCCGGCTATGCAGTGCGTTTCA 51123 ||||||||||| || ||| | ||||| || ||||| || || ||||| || | ||| Sbjct 5265 TTCATCCAGAAAAGTATCCAAACTTAACTATTCGTGTTTCTGGTTATGCTGTTCACTTC- 5207 Query 51124 ATTCACTGA-CTCCTGAACAACAGCGCGACGTTATCGCCCGAACCTTTACA-GAGAGTCT 51181 |||| | | |||| || ||||| | || ||||| || ||| |||| || || | ||| Sbjct 5206 ATTCGTTTATCTCCAGACCAACAAAGAGAAGTTATTGCTAGAA-CTTTCCATGAAACTCT 5148 Query 51182 ATAA 51185 ||| Sbjct 5147 CTAA 5144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570082224465800