Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq748 104 2e-17 seq172 102 7e-17 seq179 91.5 1e-13 >seq748 Length=202608 Score = 104 bits (114), Expect = 2e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| || || ||||| |||||||| ||||| ||| ||| |||| Sbjct 91199 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATTACTTTAGAAGTAGAATCTTCT 91258 Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || |||| || || | || || ||||| || | || ||| || Sbjct 91259 GATACCATTGAAAATGTCAAAGCTAAGATTCAA-GATAAAGAAGGTATTCCACCAGACCA 91317 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||| | ||||| ||||| || |||||||| |||||| ||| | | ||||| || Sbjct 91318 ACAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAA 91377 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTA 28766 ||||||||||||||||||||| ||| | || ||| Sbjct 91378 CATTCAAAAAGAATCTACTCTTCACTTAGTTTTA 91411 Score = 104 bits (114), Expect = 2e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| || || ||||| |||||||| ||||| ||| ||| |||| Sbjct 91655 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATTACTTTAGAAGTAGAATCTTCT 91714 Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || |||| || || | || || ||||| || | || ||| || Sbjct 91715 GATACCATTGAAAATGTCAAAGCTAAGATTCAA-GATAAAGAAGGTATTCCACCAGACCA 91773 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||| | ||||| ||||| || |||||||| |||||| ||| | | ||||| || Sbjct 91774 ACAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAA 91833 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTA 28766 ||||||||||||||||||||| ||| | || ||| Sbjct 91834 CATTCAAAAAGAATCTACTCTTCACTTAGTCTTA 91867 Score = 102 bits (112), Expect = 7e-17 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 28548 GTAAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAA 28607 ||||| |||||||| ||||| || || ||||| |||||||| || || ||| ||| Sbjct 90965 GTAAAGATGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATCACTTTAGAAGTTGAA 91024 Query 28608 CCTTCAGAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGT 28666 |||| || || | | || |||| || || | || || || || || | || Sbjct 91025 TCTTCTGATACTATTGAAAATGTCAAAGCTAAGATTCAA-GATAAGGAAGGTATTCCACC 91083 Query 28667 AGATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGA 28726 ||| ||||| | ||||| ||||| || |||||||| |||||| ||| | | || Sbjct 91084 AGACCAACAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGA 91143 Query 28727 TTATAACATTCAAAAAGAATCTACTCTGCACATGGTATTA 28766 ||| ||||||||||||||||||||||| ||| | || ||| Sbjct 91144 TTACAACATTCAAAAAGAATCTACTCTTCACTTAGTCTTA 91183 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| || || ||||| |||||||| ||||| ||| ||| |||| Sbjct 92111 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATTACTTTAGAAGTTGAATCTTCT 92170 Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || | || || || | || || || || || | || ||| || Sbjct 92171 GATACTATTGAAAATGTTAAAGCTAAGATTCAA-GATAAGGAAGGTATTCCACCAGACCA 92229 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||| | ||||| ||||| || |||||||| |||||| ||| | | ||||| || Sbjct 92230 ACAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAA 92289 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTA 28766 ||||||||||||||||||||| ||| | || ||| Sbjct 92290 CATTCAAAAAGAATCTACTCTCCACTTAGTCTTA 92323 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| || || ||||| ||||| || || || ||| ||| |||| Sbjct 91427 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAGACTATCACTTTAGAAGTTGAATCTTCT 91486 Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || | || || || | || || ||||| || | || ||| || Sbjct 91487 GATACTATTGAAAATGTTAAAGCTAAGATTCAA-GATAAAGAAGGTATTCCACCAGACCA 91545 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||| | ||||| ||||| || |||||||| |||||| ||| | | ||||| || Sbjct 91546 ACAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAA 91605 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTA 28766 ||||||||||||||||||||| ||| | || ||| Sbjct 91606 CATTCAAAAAGAATCTACTCTTCACTTAGTTTTA 91639 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| || || ||||| ||||| || || || ||| ||| |||| Sbjct 91883 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAGACTATCACTTTAGAAGTAGAATCTTCT 91942 Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || | || || || | || || || || || | || ||| || Sbjct 91943 GATACTATTGAAAATGTTAAAGCTAAGATTCAA-GATAAGGAAGGTATTCCACCAGACCA 92001 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||| | ||||| ||||| || |||||||| |||||| ||| | | ||||| || Sbjct 92002 ACAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAA 92061 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTA 28766 ||||||||||||||||||||| ||| | || ||| Sbjct 92062 CATTCAAAAAGAATCTACTCTTCACTTAGTCTTA 92095 >seq172 Length=114120 Score = 102 bits (112), Expect = 7e-17 Identities = 155/218 (71%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 28550 AAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACC 28609 |||||||||||| || ||||| || ||||| ||||| || || ||| ||| ||| | Sbjct 112695 AAAAATGCAAATCTTCGTAAAGACTTTAACTGGTAAGACTATCACCTTAGAAGTAGAATC 112754 Query 28610 TTCAGAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAG 28668 ||| || || | | || |||| || || | || ||||| || ||| | || || Sbjct 112755 TTCTGACACTATTGAAAATGTCAAAGCTAAGATTCAA-GACAAGGAAGGAATTCCTCCAG 112813 Query 28669 ATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATT 28728 | ||||| | ||||| ||||| || || ||||| |||||| ||| | | |||| Sbjct 112814 ACCAACAACGTCTTATTTTTGCTGGTAAGCAATTAGAAGATGGACGTACTCTTTCTGATT 112873 Query 28729 ATAACATTCAAAAAGAATCTACTCTGCACATGGTATTA 28766 |||| ||||||||||||||||| || ||| | || ||| Sbjct 112874 ATAATATTCAAAAAGAATCTACACTCCACTTAGTCTTA 112911 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || ||||| || || || ||||| || || ||| ||| ||| |||| Sbjct 113839 ATGCAAATCTTCGTAAAGACCTTGACTGGTAAGACTATCACCTTAGAAGTAGAATCTTCT 113898 Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || |||| || |||| || || || || || | || |||||| Sbjct 113899 GACACTATTGAAAATGTCAAAGCTAAAATTCAA-GATAAGGAAGGTATTCCTCCAGATCA 113957 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||| | ||||| ||||| || || ||||| |||||| ||| | | |||||||| Sbjct 113958 ACAACGTCTTATTTTTGCTGGTAAGCAATTAGAAGATGGACGTACTCTTTCTGATTATAA 114017 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTA 28766 ||||||||||||||||| || ||| | || ||| Sbjct 114018 TATTCAAAAAGAATCTACACTCCACTTAGTCTTA 114051 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || ||||| || || || ||||| || || ||| ||| ||| |||| Sbjct 112927 ATGCAAATCTTCGTAAAGACCTTGACTGGTAAGACTATCACCTTAGAAGTAGAATCTTCT 112986 Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || |||| || || | || ||||| || || | || ||| || Sbjct 112987 GACACTATTGAAAATGTCAAAGCTAAGATTCAA-GACAAGGAAGGTATTCCTCCAGACCA 113045 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||| | ||||| ||||| || || ||||| |||||| ||| | | |||||||| Sbjct 113046 ACAACGTCTTATTTTTGCTGGTAAGCAATTAGAAGATGGACGTACTCTTTCTGATTATAA 113105 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTA 28766 ||||||||||||||||| || || |||| ||| Sbjct 113106 TATTCAAAAAGAATCTACACTCCATTTGGTCTTA 113139 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || ||||| || || || ||||| || || ||| ||| ||| |||| Sbjct 113383 ATGCAAATCTTCGTAAAGACCTTGACTGGTAAGACTATCACCTTAGAAGTAGAATCTTCT 113442 Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || |||| || || | || ||||| || || | || ||| || Sbjct 113443 GACACTATTGAAAATGTCAAAGCTAAGATTCAA-GACAAGGAAGGTATTCCTCCAGACCA 113501 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||| | ||||| ||||| || || ||||| |||||| ||| | | |||||||| Sbjct 113502 ACAACGTCTTATTTTTGCTGGTAAGCAATTAGAAGATGGACGTACTCTTTCTGATTATAA 113561 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTA 28766 ||||||||||||||||| || || |||| ||| Sbjct 113562 TATTCAAAAAGAATCTACACTCCATTTGGTCTTA 113595 >seq179 Length=111796 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/209 (71%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 28550 AAAAATGCAA-ATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAAC 28608 |||||| || || ||||| ||||| | || ||||| ||||||||| ||| ||| Sbjct 96579 AAAAATAAAAGATTTTTGTTAAAACTCTCACTGGTAAGACCATTACCTTAGAAGTTGAAT 96520 Query 28609 CTTCAGAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTA 28667 |||| || || | | || |||| || || | || || || || || | || | Sbjct 96519 CTTCTGACACTATTGAAAATGTCAAAGCTAAGATTCAA-GATAAGGAAGGTATTCCACCA 96461 Query 28668 GATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGAT 28727 |||||||| | | |||||||| || |||||||| |||||| | ||| | | ||| Sbjct 96460 GATCAACAACGTTTAATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGAT 96401 Query 28728 TATAACATTCAAAAAGAATCTACTCTGCA 28756 || ||||||||||||||||||||||| || Sbjct 96400 TACAACATTCAAAAAGAATCTACTCTTCA 96372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425399433917265