Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq302 138 2e-27 >seq302 Length=77660 Score = 138 bits (152), Expect = 2e-27 Identities = 144/189 (76%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 47970 ACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGTATGA 48029 ||| | ||||||| |||||||||||| | ||||| |||| ||| |||| | || | Sbjct 21541 ACCTCTTCTTGGACTTTCATGATTAAATAATATACCGTTACATGCAAACATATCATAAGC 21600 Query 48030 TTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGAACG 48089 ||||||||| || ||| ||||| || |||| | ||| || |||||||| |||||||| Sbjct 21601 TTCACGATAATTAACTACAATCCAATAGGCATATAATTTAGCTACACCATATGGAGAACG 21660 Query 48090 TGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTCACT 48149 ||| ||||| || || | || | || ||| | ||||| || ||||||||||||||||| Sbjct 21661 TGGGTAGAATGGCGTTTTTTCATTTTGAGGAATTTCTTGAACTTTACCATAAAGTTCACT 21720 Query 48150 GGTGGATGC 48158 || ||||| Sbjct 21721 TGTAGATGC 21729 Score = 96.9 bits (106), Expect = 5e-15 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 48384 ATAAATGTGATCAATTCTATGTGTATTAATTAAAGAAGCCCGACGGACAATACCATGAAC 48443 ||| || || |||||||| |||||||| | |||||| || || | |||||||||||| Sbjct 23118 ATATATATGCTCAATTCTTGCTGTATTAAATGAAGAAGAACGTCGTATAATACCATGAAC 23177 Query 48444 CTCATACCCCTTTTCAAGAAGAAGTTCTGCTAAGTATGAACCATCTTGTCCTGTAATACC 48503 ||| || || || | | ||| | ||||||||||||||||||||| || ||||| Sbjct 23178 TGTATATCCTTTACTAATTAATAATTCGGTTAAGTATGAACCATCTTGTCCGGTGATACC 23237 Query 48504 AGTGATTAAAGCAACTTT 48521 | ||||||| || || || Sbjct 23238 ACTGATTAATGCTACCTT 23255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665485790166200