Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq284 102 1e-16 seq337 82.4 9e-11 >seq284 Length=82653 Score = 102 bits (112), Expect = 1e-16 Identities = 238/352 (68%), Gaps = 18/352 (5%) Strand=Plus/Plus Query 13546 AATTACCGGTATTCCCAAGTTGGATGACGCGAACAAGGCGGGTACGGCACAATCTGGAAA 13605 |||| | ||||| || || |||||||| || || || || ||||| || ||| | | Sbjct 2458 AATTTCAGGTATACCAAAATTGGATGATGCTAATAATGCTGGTACAAAGCATTCTAAAGA 2517 Query 13606 GTGTACTCTCATTGTCACAGAGGGTGATTCGGCTAAAACCCTCGCGGTTGCGGGTCTCTC 13665 ||| | | ||| | ||||| || ||||| |||||| | | || || ||| | | Sbjct 2518 TTGTGTTTTAATTTTAACAGAAGGGGATTCTGCTAAAGCATTAGCTATTAGTGGTTTAAC 2577 Query 13666 TGTCGTTGGTCGTGATCACTACGGTGTGTTCCCACTTCGCGGT-AAATGTAAGAATGTTC 13724 ||| |||||||||||| | || ||||| |||||| | || ||| |||||| |||||||| Sbjct 2578 TGTTGTTGGTCGTGATAATTATGGTGTTTTCCCATTACGTGGTAAAATGT-TGAATGTTC 2636 Query 13725 GGGACGCTTCGGTGGCACAGCTCACAT-----CAAACCAGGAGTTCAACGATCTCAAGAA 13779 | || ||||| || | ||| | || ||| || | | | | | ||| | Sbjct 2637 GTGATGCTTC----ACATAAATCAATTATGGATAATGCAGAAG-TAAGTGCTATTAAGCA 2691 Query 13780 GATCCTTGGTCTTCAACAAGGAAAAGACTACCAAGATGTTTCTGA-ACTT--CGCTATGG 13836 || |||||| | ||||| || |||| || || | | | || | || | ||||| Sbjct 2692 AATTCTTGGTTTACAACATGGTAAAGTTTATGAAAA---TACAGATAGTTTAAGATATGG 2748 Query 13837 TCGTCTTATGATTATGACAGATGCCGATAATGATGGTTCTCACATCAAGGGT 13888 | | ||||||||||| | ||| |||| |||||||||||||| || ||| Sbjct 2749 ACATATTATGATTATGGCTGATCAAGATACGGATGGTTCTCACATTAAAGGT 2800 >seq337 Length=280390 Score = 82.4 bits (90), Expect = 9e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 19024 ATAGCATAGATTGTGTGCCATCATAATTGATGGATACAGTGCTTCAAAATCAAGAGCGGT 19083 ||| |||| ||| ||||||||||||||||||||||| || | | ||||||||||| || Sbjct 256800 ATAACATAAATTATGTGCCATCATAATTGATGGATAAAGAGAGTTAAAATCAAGAGTGGA 256859 Query 19084 AATTGGAGTATAGTATGCACCCTTTTGTGCTTCAAGAACCGTAGCTCC 19131 |||||| || || ||| || | || ||||| ||| ||||| || Sbjct 256860 GATTGGACAATCATAAAAACCTTTCTTTGGTTCAATAACAGTAGCACC 256907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596561881880800