Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq179 149 1e-30 seq748 143 5e-29 seq233 113 8e-20 >seq179 Length=111796 Score = 149 bits (164), Expect = 1e-30 Identities = 192/264 (73%), Gaps = 1/264 (0%) Strand=Plus/Plus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 |||||| | || ||||| || ||||| | |||| ||||| ||| || || || || Sbjct 96347 ACCACCACGTAAACGAAGAACAAGATGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGA 96406 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 | || | | ||| ||||||||||| |||||||| ||||| | |||||||| || || Sbjct 96407 AAGAGTACGACCATCTTCTAATTGTTTACCGGCAAAGATTAAACGTTGTTGATCTGGTGG 96466 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312 || ||||| |||||||| || || | ||| | |||| |||||| || ||||| ||||| Sbjct 96467 AATACCTTCCTTATCTTGAATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGATTCAAC 96526 Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatat-ttgcattttattagtaa 193371 ||||| || || || ||||| || || ||||| ||||| || || ||||| || | Sbjct 96527 TTCTAAGGTAATGGTCTTACCAGTGAGAGTTTTAACAAAAATCTTTTATTTTTTTTTTTT 96586 Query 193372 aataattattttaaataatatata 193395 | ||| || |||| | |||||| Sbjct 96587 ATTAAATAAATTAATAATTATATA 96610 >seq748 Length=202608 Score = 143 bits (158), Expect = 5e-29 Identities = 178/242 (74%), Gaps = 15/242 (6%) Strand=Plus/Minus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| ||||||||||| || |||||||| | | ||||| || || || || ||||| || Sbjct 91126 ATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTT 91067 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 |||||| || || | ||| | |||| ||||||||| ||||| |||||||||| ||| || Sbjct 91066 ATCTTGAATCTTAGCTTTGACATTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTGAT 91007 Query 193325 AGTTTTACCTGTTAGCGtttttacaaatatttgcat------------tttattagtaaa 193372 ||||||||| |||| || || ||||| |||||||| ||||||| |||| Sbjct 91006 AGTTTTACCAGTTAAAGTCTTAACAAAAATTTGCATCTTTACTATTTATTTATTACTAAA 90947 Query 193373 ataattattttaaataatatatactttatattttaacattatattatacaatgaaaattt 193432 | || || ||| | || ||| ||||| | || | | ||||| |||| || ||||| | Sbjct 90946 AATATAATATTATA-AAAATAAACTTTTTTTTGTTATATTAT-TTAT-TTATAAAAATAT 90890 Query 193433 at 193434 || Sbjct 90889 AT 90888 Score = 138 bits (152), Expect = 2e-27 Identities = 124/156 (79%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| ||||||||||| || |||||||| | | ||||| || || || || |||||||| Sbjct 91582 ATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTT 91523 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 |||||| || || | ||| | |||| ||||||||| ||||| |||||||||| ||| || Sbjct 91522 ATCTTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTGAT 91463 Query 193325 AGTTTTACCTGTTAGCGtttttacaaatatttgcat 193360 ||| ||||| |||| || || ||||| |||||||| Sbjct 91462 AGTCTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 91427 Score = 138 bits (152), Expect = 2e-27 Identities = 124/156 (79%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| ||||||||||| || |||||||| | | ||||| || || || || ||||| || Sbjct 92266 ATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTT 92207 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 |||||| || || | ||| | |||| ||||||||| ||||| |||||||||| ||| || Sbjct 92206 ATCTTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTAAT 92147 Query 193325 AGTTTTACCTGTTAGCGtttttacaaatatttgcat 193360 ||||||||| |||| || || ||||| |||||||| Sbjct 92146 AGTTTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 92111 Score = 134 bits (148), Expect = 2e-26 Identities = 124/156 (79%), Gaps = 1/156 (1%) Strand=Plus/Minus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| ||||||||||| || |||||||| | | ||||| || || || || ||||||| Sbjct 92493 ATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTT- 92435 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 |||||| || || | ||| | |||| ||||||||| ||||| |||||||||| ||| || Sbjct 92434 ATCTTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTAAT 92375 Query 193325 AGTTTTACCTGTTAGCGtttttacaaatatttgcat 193360 ||||||||| |||| || || ||||| |||||||| Sbjct 92374 AGTTTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 92339 Score = 132 bits (146), Expect = 9e-26 Identities = 123/156 (79%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| ||||||||||| || |||||||| | | ||||| || || || || |||||||| Sbjct 91354 ATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTT 91295 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 |||||| || || | ||| | |||| ||| ||||| ||||| || ||||||| ||| || Sbjct 91294 ATCTTGAATCTTAGCTTTGACATTTTCAATGGTATCAGAAGATTCTACTTCTAAAGTAAT 91235 Query 193325 AGTTTTACCTGTTAGCGtttttacaaatatttgcat 193360 ||||||||| |||| || || ||||| |||||||| Sbjct 91234 AGTTTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 91199 Score = 132 bits (146), Expect = 9e-26 Identities = 123/156 (79%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| ||||||||||| || |||||||| | | ||||| || || || || |||||||| Sbjct 91810 ATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTT 91751 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 |||||| || || | ||| | |||| ||| ||||| ||||| || ||||||| ||| || Sbjct 91750 ATCTTGAATCTTAGCTTTGACATTTTCAATGGTATCAGAAGATTCTACTTCTAAAGTAAT 91691 Query 193325 AGTTTTACCTGTTAGCGtttttacaaatatttgcat 193360 ||||||||| |||| || || ||||| |||||||| Sbjct 91690 AGTTTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 91655 Score = 129 bits (142), Expect = 1e-24 Identities = 122/156 (78%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| ||||||||||| || |||||||| | | ||||| || || || || ||||| || Sbjct 92038 ATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTT 91979 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 |||||| || || | ||| | |||| ||||||||| ||||| || ||||||| ||| || Sbjct 91978 ATCTTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCTACTTCTAAAGTGAT 91919 Query 193325 AGTTTTACCTGTTAGCGtttttacaaatatttgcat 193360 ||| ||||| |||| || || ||||| |||||||| Sbjct 91918 AGTCTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 91883 >seq233 Length=93418 Score = 113 bits (124), Expect = 8e-20 Identities = 131/177 (74%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237 ||| || ||||| || | ||||| ||| ||||||||||| ||||| || || | | Sbjct 51830 AATGTTGTAGTCAGAAAGGGTTCTGTCATCTTCTAATTGTTTACCGGCGAAGATAAGACG 51889 Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297 ||||| || || || || ||||| || ||||| || ||| | || | ||| | |||| | Sbjct 51890 TTGTTGGTCTGGTGGAATACCTTCCTTTTCTTGAATCTTGTTCTTAACATTGACAATACT 51949 Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatat 193354 |||||||||||||| || || |||||||| || || || || ||||| || || || Sbjct 51950 GTCGGAAGACTCAACCTCAAGGGTTATAGTCTTTCCAGTAAGGGTTTTGACGAAAAT 52006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899642760721200