Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq191 154 4e-32 seq259 100 8e-16 >seq191 Length=109312 Score = 154 bits (170), Expect = 4e-32 Identities = 360/529 (68%), Gaps = 18/529 (3%) Strand=Plus/Minus Query 233259 TTAAAAATGTTGTAGCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCA 233318 |||| ||| || |||||| ||| |||||||||||| |||||||||||| | ||| | Sbjct 91407 TTAAGAATTGTGCAGCACCATGACTAATCATACAATCCTTTTCCATTTCACCGAAACGAA 91348 Query 233319 GACCACCATCATTTGACCTACCCTGGACTGTTTGACGAGTTAAAACAGTTCTTGGACCCT 233378 ||||||||||| || ||||| | |||| ||||||||| | || | |||||| Sbjct 91347 GACCACCATCACGAGATCTACCTTCTACTGGTTGACGAGTAAGAATTTGTACTGGACCAC 91288 Query 233379 GAGCACGATAATTAATTTTATCTTTAACCATATGCTTCAGTCTCATATAATAACACGGAC 233438 |||||||| | ||| ||||| | ||||||||||| | | |||||| |||| Sbjct 91287 GAGCACGACTGTGAATCTTATCATCTACCATATGCTTTAAACGTTGGTAATAAGTTGGAC 91228 Query 233439 CAATAAATAGTTCTGCGTGTAATTGTTCCCCAGATTCACCGCTGTATAAAACTTCATTAC 233498 ||| || | || || || | || || |||| | ||| | | | |||||| || Sbjct 91227 CAAGGAAGATTTGAGCTTGAAGTTTTTTACCAGTATGACCATTAAACATAACTTCGAAAC 91168 Query 233499 C-CGATGAATTGTAACCAATATCTTTTAATAGAGAACCAAATACCTGATGCTTTGGACCT 233557 | ||| || | || ||| | ||| |||| || | |||| || | || | || Sbjct 91167 CACGA-GATTGATAGCCATTTTCTCTTAAAAGTTTA-GAAATGGCTTCTACTGT-AAC-- 91113 Query 233558 TTATTAGCAAACGCAGTACAATCACCAAAACCACCA-TACGTCGCACACGCTTTACCCAT 233616 || || ||| | ||| |||||| | ||||| || | | | | ||||| | Sbjct 91112 --ATCAGTAAATGGTGTAGCATCACCTTCATCACCAGTAAG-GGTTGAAACCTTACCAAG 91056 Query 233617 TAAAGTTTCTATCAACTGACCGATAGTCATTCTACTTGGTAGAGCGTGTGGATTGATAAT 233676 |||| ||| | ||| ||||| |||||||| | | ||| | |||||||||||| ||||| Sbjct 91055 TAAACATTCAACCAAGTGACCAATAGTCATACGAGATGGGATAGCGTGTGGATTAATAAT 90996 Query 233677 TAAATCTGGACGTACTCCCTCCGA-TGTAAAAGGCATATCTTTTTCAG--GGAT-TATCA 233732 | |||||| || | ||| | | ||||| |||||||| ||||| ||| | ||| Sbjct 90995 AATATCTGG-TGTGATACCTTCAACAGTAAATGGCATATC---TTCAGTACGATATGTCA 90940 Query 233733 GTCCAACTGTTCCCTTTTGGCCGCATCTACTACAGAATTTATCACCCAT 233781 || || || |||||||| ||| ||||||| || ||||||||||| Sbjct 90939 TACCGACAGTACCCTTTTGACCGTGTCTACTAGCAAACTTATCACCCAT 90891 Score = 143 bits (158), Expect = 8e-29 Identities = 195/272 (72%), Gaps = 0/272 (0%) Strand=Plus/Plus Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631 ||||||| | || || | |||||| ||||||||||| ||| | |||||||||||| Sbjct 19330 TCTTCCAAAGATTTAATAAGACGACGTTGAATATAACCGGTTTCGGCTGTTTTTACAGCA 19389 Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGC 302691 |||||||||| ||| ||||||||||||||||||||||||| | |||| || || Sbjct 19390 GTATCAATTAAACCTTCACGACCACCCATAGCATGGAAGAAGAATTCTTGTGGAGTTAAA 19449 Query 302692 CCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTA 302751 || | || | | || | || ||||||||||| | || || | || ||| ||| Sbjct 19450 CCACGAAGATATGAATTTTCTACGAAACCACGAGATTCAGGACTTTGATCATCCTTAGTA 19509 Query 302752 AAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGC 302811 ||||| || || || || | | | | ||| |||| ||||| || || || ||||| || Sbjct 19510 AAGTGAGGAAGAGTTCTATATTTAAATCCGAATGGAATACGTTTACCTTCTACGTTTTGT 19569 Query 302812 TGTCCCAGGCACGAAATCATCTGCGAAATATT 302843 || || | || | | |||| || |||||||| Sbjct 19570 TGACCTACACAAGCAGTCATTTGAGAAATATT 19601 Score = 125 bits (138), Expect = 2e-23 Identities = 220/320 (69%), Gaps = 8/320 (3%) Strand=Plus/Minus Query 251412 ACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTT 251471 |||||| || ||| || || || | ||||||||| || || | || || | || Sbjct 91466 ACCACATAAATCACATACGTGAACACGATAAGCATCACTTGTATCGAAAAGACGTTCTTT 91407 Query 251472 GGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAG 251531 ||| | | ||||| || |||||||||||| |||||||||||||||||||| Sbjct 91406 TAAGAATTGTGCAGCACCATGACTAATCATACAATCCTTTTCCATTTCACCGAAACGAAG 91347 Query 251532 ACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGAT 251591 ||||||||| |||| ||||| || | || |||||||| ||| | | ||||| Sbjct 91346 ACCACCATCACGAGATCTACCTTCTACTGGTTGACGAGTAAGAATTTGTACTGGACCACG 91287 Query 251592 GGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACC 251651 | || || || |||||||| |||||||||||| | ||| ||||| | | ||||| Sbjct 91286 AGCACGACTGTGAATCTTATCATCTACCATATGCTTTAAACGTTGGTAATAAGTTGGACC 91227 Query 251652 GATGAAGAT----GCTCGAAGGCATTTGCTCTCCAGTTAGAGCGTTATACATAACTTCGT 251707 | |||||| ||| |||| || | ||||| || | ||| ||||||||||| Sbjct 91226 AAGGAAGATTTGAGCTTGAAG----TTTTTTACCAGTATGACCATTAAACATAACTTCGA 91171 Query 251708 TTCCATTAGATTCATAACCA 251727 ||| ||||| ||| ||| Sbjct 91170 AACCACGAGATTGATAGCCA 91151 Score = 109 bits (120), Expect = 2e-18 Identities = 143/196 (73%), Gaps = 13/196 (7%) Strand=Plus/Plus Query 301762 TCGTTTAAATAAATAGTACAGGATGGATTCTTTGTGTTTTCCGATAGAGACAG-----AA 301816 ||| ||||||||| ||| | |||||| |||| | || | ||| ||| || Sbjct 18493 TCGGTTAAATAAACAGTCAATGATGGAGTCTTAATATTCT----TAGCAACATTAATTAA 18548 Query 301817 TTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAAGT 301876 || |||||| ||| || |||||| | || || || ||| || ||||||||| ||| Sbjct 18549 TTCCTTCAA-ACGCGGTACACCAAGTGTGACATT---CTTTGAACTTACACCAGCATAGT 18604 Query 301877 GGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCATAC 301936 |||||||||| | || | |||||||| ||| ||||| |||||||| || ||||| ||| Sbjct 18605 GGAAAGTATTTAATGTCATTTGAGTAGCTGGTTCACCTATACTTTGAGCAGCAATAGTAC 18664 Query 301937 CAACCATTTCTCCTGG 301952 |||||||||| | ||| Sbjct 18665 CAACCATTTCACATGG 18680 >seq259 Length=461915 Score = 100 bits (110), Expect = 8e-16 Identities = 146/203 (72%), Gaps = 4/203 (2%) Strand=Plus/Plus Query 233271 TAGCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCAT 233330 ||||||| ||| |||| | ||||||||||||||||||||| | ||| ||||||||||| Sbjct 207148 TAGCACCATGACCAATTAAACAATCACGTTCCATTTCACCTACACGAAGACCACCATCCC 207207 Query 233331 TTGACCTACCCTGGACTGTTTGACGAGTTAAAACAGTTCTTGGACCCTGAGCACGATAAT 233390 |||| | ||| | || ||| | ||||||||||| | | ||| ||| | | || Sbjct 207208 TTGAACGACCTTCTGTTGGTTGTCTAGTTAAAACAGCACGTTTACCACGAGATCTAGCAT 207267 Query 233391 TAATTTTATCTTTAACCATATGCTTCAGTC--TCATATAATAACACGGACCAATAAATAG 233448 ||||||||| ||||| || || | | | ||| || ||| ||||||| ||| | Sbjct 207268 GCATTTTATCTAATACCATGTGTTTTAAACGTTGATAGAA-AAC-TGGACCAAAAAAGAT 207325 Query 233449 TTCTGCGTGTAATTGTTCCCCAG 233471 | ||| | |||| |||| |||| Sbjct 207326 ATATGCTTCTAATGGTTCACCAG 207348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471798082318795