Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq284 116 5e-21 seq615 113 6e-20 seq191 102 1e-16 seq259 96.9 4e-15 >seq284 Length=82653 Score = 116 bits (128), Expect = 5e-21 Identities = 126/166 (76%), Gaps = 6/166 (4%) Strand=Plus/Plus Query 165950 ATTAAGGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAGCATGGTGAA 166009 ||||| ||||||||| | | || |||||||||||||| ||| ||| | ||||||||| Sbjct 3722 ATTAAAGTTGCTCAACTTACAGGTTATGTTGCAGAACACTCAGCTTACCATCATGGTGAA 3781 Query 166010 CAAAATTTATGTGAAACTATAATT---AAGTTTGCCCAAGATTTTGTTGGTACAAATAAT 166066 |||| | | | |||||| |||| || || || |||||||||||||||| |||||| Sbjct 3782 CAAAGTCT---TCAAACTACAATTGTTAATTTAGCTCAAGATTTTGTTGGTAGTAATAAT 3838 Query 166067 ATAGCATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAG 166112 || | ||| | | || |||||||||||||||| | ||| ||| Sbjct 3839 ATTCCTTTATTAGTTCCAAATGGTCAATTTGGTACACGTTTACAAG 3884 >seq615 Length=217977 Score = 113 bits (124), Expect = 6e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 172399 AAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTG 172458 ||||| | || ||| || | | |||| |||||| |||| |||| | | ||| Sbjct 39935 AAGAATTGTTTTGGTTTTTAAGAGGTGATACTGATGGAAAAATATTATCAAAGAAAGGAA 39876 Query 172459 TTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAA 172518 || | | ||| | | ||||||||| ||||||||| | ||| | || || || || | Sbjct 39875 TTCATATATGGGAAGGTAATGGTTCCCGTGAATTTCTTGATAAAATTGGTTTAACAGATA 39816 Query 172519 GAAAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAAT 172578 || | |||||||||||||| ||||| ||||| | |||||| | ||| || ||| ||| Sbjct 39815 GAGAGGAAGGTGATTTAGGACCAATATATGGTTGGCAATGGCGTCATTTTGGTGCTAAAT 39756 Query 172579 ATATCGACTGTGATACAGATTACACAGGACAAGGA 172613 || | || ||| |||||||||| ||||| |||||| Sbjct 39755 ATGTAGATTGTCATACAGATTATACAGGTCAAGGA 39721 >seq191 Length=109312 Score = 102 bits (112), Expect = 1e-16 Identities = 159/222 (72%), Gaps = 4/222 (2%) Strand=Plus/Plus Query 194565 TACTGGTaaaaaaaTTGAAAATAAAATTTTTATAGGGCCAACTTATTACCATCGTCTTAA 194624 ||||||||||||| || || | |||| || | || |||||||||||||| ||| | || Sbjct 91193 TACTGGTAAAAAACTTCAAGCTCAAATCTTCCTTGGTCCAACTTATTACCAACGTTTAAA 91252 Query 194625 ACACATGGTTAAGGATAAAATGCATGCTAGAAGTCATGGGCAAGTAACTACT-TTACATC 194683 || ||||| | ||||| || || | | || ||| | |||| | | |||| || Sbjct 91253 GCATATGGTAGATGATAAGATTCACAGTCGTGCTCGTGGTCCAGTACAAATTCTTAC-TC 91311 Query 194684 GACAACCAAATTGTGGTCGTTCTCAAGGTGGAGGTTTAAGATTTGGAGAAATGGAAAAAG 194743 | |||||| ||| | |||| | ||| ||| | | || || ||||||||||| | Sbjct 91312 GTCAACCAGTAGAAGGTAGATCTCGTGATGGTGGTCTTCGTTTCGGTGAAATGGAAAAGG 91371 Query 194744 ACTGTAT-TTTAGTCCATGGTGCTACTCAATTCTTAAATGAA 194784 | ||||| ||||| ||||||||| | ||||||||||| ||| Sbjct 91372 ATTGTATGATTAGT-CATGGTGCTGCACAATTCTTAAAAGAA 91412 >seq259 Length=461915 Score = 96.9 bits (106), Expect = 4e-15 Identities = 196/286 (69%), Gaps = 10/286 (3%) Strand=Plus/Minus Query 194564 TTACTGGTaaaaaaaTTGAAAATAAAATTTTTATAGGGCCAACTTATTACCATCGTCTTA 194623 |||||||| || | | ||| | || ||| | || ||| || || || ||| | | Sbjct 207351 TTACTGGTGAACCATTAGAAGCATATATCTTTTTTGGTCCAGTTTTCTATCAACGTTTAA 207292 Query 194624 AACACATGGTTAAGGATAAAATGCATGCTAGAAGTCATGGGCAAGTAACTACTTTACATC 194683 |||||||||| |||||||||||||||||| || ||| || || |||| | Sbjct 207291 AACACATGGTATTAGATAAAATGCATGCTAGATCTCGTGGTAAACGTGCTGTTTTAACTA 207232 Query 194684 GACAACCAAATTGTGGTCGTTCTCAAGG--TGGAGGTTTAAGATTTGGAGAAATGGAAAA 194741 ||||||||| |||||| |||||| ||| ||| | | | || ||||||||| Sbjct 207231 GACAACCAACAGAAGGTCGT--TCAAGGGATGGTGGTCTTCGTGTAGGTGAAATGGAACG 207174 Query 194742 AGACTGTATTTTAGTCCATGGTGCTACTCAATTCTTAAATGAAAG---AATGTTTTTGTA 194798 || ||| | | | |||||||||| | | || |||| ||||| |||| ||| ||| Sbjct 207173 TGATTGTTTAATTGGTCATGGTGCTAGTAATTTATTAATGGAAAGATTAATG-TTTAGTA 207115 Query 194799 TTCTGATCCTTTTCAAGTCGATGTTTGCACAGAATGTGGTATGATT 194844 |||| ||||| || | |||||||| ||| |||||| ||||| Sbjct 207114 --GTGATGCTTTTGAAATTGATGTTTGTCAAGATTGTGGTTTGATT 207071 Score = 86.0 bits (94), Expect = 8e-12 Identities = 104/135 (77%), Gaps = 10/135 (7%) Strand=Plus/Minus Query 194242 CCTGAAATAGGGGATAAATTTTGTTCGGGA-ATGGCTCAAAAAGGAACTTGTGGTATGAT 194300 || ||| |||| |||||||| | ||| || |||| ||||||||| ||||||| | || Sbjct 207758 CCAGAATTAGGTGATAAATTCTCTTCAAGACATGG-TCAAAAAGGTGTTTGTGGTTTAAT 207700 Query 194301 --TTATTCACAAGAAGATATGCCATTTAC--AACTTCAGGTATGGTACCAGATATTATTA 194356 ||| ||| |||||||||||||||||| | ||| ||||| || ||||||||||| | Sbjct 207699 CGTTAATCA--AGAAGATATGCCATTTACTGATCTT--GGTATAGTTCCAGATATTATCA 207644 Query 194357 TCAATCCAAATTGTA 194371 | ||||| || ||| Sbjct 207643 TGAATCCTCATGGTA 207629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632481417165800