Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq748 127 2e-24 seq179 127 2e-24 seq304 125 6e-24 seq172 113 4e-20 seq53 89.7 5e-13 seq233 87.8 2e-12 >seq748 Length=202608 Score = 127 bits (140), Expect = 2e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| |||| || |||| |||||||||||||| | ||||||||| | | Sbjct 91199 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATTACTTTAGAAGTAGAATCTTCT 91258 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| || ||| ||||| ||||| |||||||| || || || || ||| Sbjct 91259 GATACCATTGAAAATGTCAAAGCTAAGATTCAAGATAAAGAAGGTATTCCACCAGACCAA 91318 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | || ||||| || ||||| | || ||| | | | || ||||| ||| Sbjct 91319 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAAC 91378 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 |||||||| ||||| || || ||||| || || || Sbjct 91379 ATTCAAAAAGAATCTACTCTTCACTTAGTTTTACG 91413 Score = 127 bits (140), Expect = 2e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| |||| || |||| |||||||||||||| | ||||||||| | | Sbjct 91655 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATTACTTTAGAAGTAGAATCTTCT 91714 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| || ||| ||||| ||||| |||||||| || || || || ||| Sbjct 91715 GATACCATTGAAAATGTCAAAGCTAAGATTCAAGATAAAGAAGGTATTCCACCAGACCAA 91774 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | || ||||| || ||||| | || ||| | | | || ||||| ||| Sbjct 91775 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAAC 91834 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 |||||||| ||||| || || ||||| || || || Sbjct 91835 ATTCAAAAAGAATCTACTCTTCACTTAGTCTTACG 91869 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| |||| || |||| |||||||||||||| | ||||| ||| | | Sbjct 92111 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATTACTTTAGAAGTTGAATCTTCT 92170 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| || ||| ||||| ||||| || ||||| || || || || ||| Sbjct 92171 GATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGACCAA 92230 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | || ||||| || ||||| | || ||| | | | || ||||| ||| Sbjct 92231 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAAC 92290 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 |||||||| ||||| || || ||||| || || || Sbjct 92291 ATTCAAAAAGAATCTACTCTCCACTTAGTCTTACG 92325 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| || ||| |||| || |||| ||||||||||| || | ||||| ||| | | Sbjct 90970 GATGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATCACTTTAGAAGTTGAATCTTC 91029 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | |||| || ||| ||||| ||||| || ||||| || || || || || Sbjct 91030 TGATACTATTGAAAATGTCAAAGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGACCA 91089 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||||||| | || ||||| || ||||| | || ||| | | | || ||||| || Sbjct 91090 ACAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAA 91149 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 ||||||||| ||||| || || ||||| || || || Sbjct 91150 CATTCAAAAAGAATCTACTCTTCACTTAGTCTTACG 91185 Score = 114 bits (126), Expect = 1e-20 Identities = 155/215 (72%), Gaps = 1/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| |||| || |||| |||||||||||||| | ||||| ||| | | Sbjct 92339 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATTACTTTAGAAGTTGAATCTTCT 92398 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| || ||| ||||| ||||| || ||||| || || || || ||| Sbjct 92399 GATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAA-GAAGGTATTCCACCAGACCAA 92457 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | || ||||| || ||||| | || ||| | | | || ||||| ||| Sbjct 92458 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAAC 92517 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 |||||||| ||||| || || ||||| || || || Sbjct 92518 ATTCAAAAAGAATCTACTCTCCACTTAGTTTTACG 92552 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| |||| || |||| ||||| ||||| || | ||||| ||| | | Sbjct 91427 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAGACTATCACTTTAGAAGTTGAATCTTCT 91486 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| || ||| ||||| ||||| |||||||| || || || || ||| Sbjct 91487 GATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAAAGAAGGTATTCCACCAGACCAA 91546 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | || ||||| || ||||| | || ||| | | | || ||||| ||| Sbjct 91547 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAAC 91606 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 |||||||| ||||| || || ||||| || || || Sbjct 91607 ATTCAAAAAGAATCTACTCTTCACTTAGTTTTACG 91641 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| |||| || |||| ||||| ||||| || | ||||||||| | | Sbjct 91883 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAGACTATCACTTTAGAAGTAGAATCTTCT 91942 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| || ||| ||||| ||||| || ||||| || || || || ||| Sbjct 91943 GATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGACCAA 92002 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | || ||||| || ||||| | || ||| | | | || ||||| ||| Sbjct 92003 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAAC 92062 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 |||||||| ||||| || || ||||| || || || Sbjct 92063 ATTCAAAAAGAATCTACTCTTCACTTAGTCTTACG 92097 >seq179 Length=111796 Score = 127 bits (140), Expect = 2e-24 Identities = 166/227 (73%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 24708 AGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACA 24767 |||| ||| ||||||| || || ||||| || ||||| | ||||| ||| | | |||| Sbjct 96570 AGATTTTTGTTAAAACTCTCACTGGTAAGACCATTACCTTAGAAGTTGAATCTTCTGACA 96511 Query 24768 CAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAAC 24827 | | |||| || ||| ||||| ||||| || ||||| || || || |||||||||| Sbjct 96510 CTATTGAAAATGTCAAAGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGATCAACAAC 96451 Query 24828 GTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTC 24887 |||| ||||||||||| ||||| | || ||| | | | || ||||| ||||||| Sbjct 96450 GTTTAATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAACATTC 96391 Query 24888 AAAAGGAATCGACACTACA-CTTGGTGTTGCGATTGCGCGGAGGCGG 24933 |||| ||||| || || || |||| | || || || || || || || Sbjct 96390 AAAAAGAATCTACTCTTCATCTTGTTCTT-CGTTTACGTGGTGGTGG 96345 >seq304 Length=284809 Score = 125 bits (138), Expect = 6e-24 Identities = 154/209 (74%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| |||||| | ||||| || || ||||| || ||||| || || || ||| || | Sbjct 189728 GATGCAAATCTTTGTCAAAACCCTTACGGGTAAGACCATTACCCTTGAGGTTGAATCCTC 189669 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | |||| || ||| ||||||||||| || ||||| || || || || || Sbjct 189668 CGACACTATTGAAAATGTCAAAGCTAAGATCCAAGATAAGGAAGGTATCCCACCAGACCA 189609 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||||||| | ||||| ||||| || || | || ||| | | | || || || || Sbjct 189608 ACAACGTCTTATCTTCGCCGGTAAGCAATTAGAAGATGGTCGTACTCTTTCTGACTACAA 189549 Query 24883 CATTCAAAAGGAATCGACACTACA-CTTG 24910 ||||||||||||||| || |||| |||| Sbjct 189548 CATTCAAAAGGAATCTACTTTACATCTTG 189520 >seq172 Length=114120 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || | || ||||| ||||| || | ||||||||| | | Sbjct 113839 ATGCAAATCTTCGTAAAGACCTTGACTGGTAAGACTATCACCTTAGAAGTAGAATCTTCT 113898 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || ||| || || ||||| || ||||| || ||||| |||||| Sbjct 113899 GACACTATTGAAAATGTCAAAGCTAAAATTCAAGATAAGGAAGGTATTCCTCCAGATCAA 113958 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | || ||||| || || || | || ||| | | | || |||||||| Sbjct 113959 CAACGTCTTATTTTTGCTGGTAAGCAATTAGAAGATGGACGTACTCTTTCTGATTATAAT 114018 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 |||||||| ||||| ||||| ||||| || || || Sbjct 114019 ATTCAAAAAGAATCTACACTCCACTTAGTCTTACG 114053 >seq53 Length=166033 Score = 89.7 bits (98), Expect = 5e-13 Identities = 132/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 24707 CAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGAC 24766 ||||| ||| | || || || ||||| || ||||| || || || || ||| | ||||| Sbjct 113217 CAGATTTTTGTAAAGACCCTTACCGGAAAGACTATAACCCTTGAGGTTGAATCTTCCGAC 113276 Query 24767 ACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAA 24826 | | | | || || |||||||||||||| || ||||| || || || ||||||||| Sbjct 113277 AGCATTGTTAATGTTAAGCAAAAGATCCAAGAAAAGGAAGGTATTCCACCAGATCAACAA 113336 Query 24827 CGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATT 24886 ||||| || || || || || || | || ||| | | | || || || ||||| Sbjct 113337 CGTTTAATTTTCGCTGGTAAGCAATTAGAAGATGACCGTACTCTTTCTGACTACAACATC 113396 Query 24887 CAAAAGG 24893 ||||||| Sbjct 113397 CAAAAGG 113403 >seq233 Length=93418 Score = 87.8 bits (96), Expect = 2e-12 Identities = 131/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 24708 AGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACA 24767 |||| || | ||||| || || || || ||||| || || || || || | |||||| Sbjct 52008 AGATTTTCGTCAAAACCCTTACTGGAAAGACTATAACCCTTGAGGTTGAGTCTTCCGACA 51949 Query 24768 CAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAAC 24827 | | | || || | ||||| ||||| || ||||| || || || || ||||||| Sbjct 51948 GTATTGTCAATGTTAAGAACAAGATTCAAGAAAAGGAAGGTATTCCACCAGACCAACAAC 51889 Query 24828 GTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTC 24887 || | ||||| ||||| ||||| | || ||| |||| | | || || || ||||||| Sbjct 51888 GTCTTATCTTCGCCGGTAAACAATTAGAAGATGACAGAACCCTTTCTGACTACAACATTC 51829 Query 24888 AAAAGG 24893 |||||| Sbjct 51828 AAAAGG 51823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449891779449800