Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq304 111 1e-19 seq53 89.7 3e-13 >seq304 Length=284809 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||| |||||||| ||||| || || | || |||| || | |||||| ||||||||| Sbjct 189537 TCCTTTTGAATGTTGTAGTCAGAAAGAGTACGACCATCTTCTAATTGCTTACCGGCGAAG 189596 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || || ||||| |||||| | || | || ||||| || | || || |||||| | Sbjct 189597 ATAAGACGTTGTTGGTCTGGTGGGATACCTTCCTTATCTTGGATCTTAGCTTTGACATTT 189656 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | || || || || |||| ||| |||||||| ||||| ||||| || ||| Sbjct 189657 TCAATAGTGTCGGAGGATTCAACCTCAAGGGTAATGGTCTTACCCGTAAGGGTTTTGACA 189716 Query 34967 AAGATCTGCAT 34977 ||||| ||||| Sbjct 189717 AAGATTTGCAT 189727 >seq53 Length=166033 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 10/192 (5%) Strand=Plus/Minus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 |||| || ||||| ||||| || || | || ||||| || | |||||| || ||||| | Sbjct 113403 CCTTTTGGATGTTGTAGTCAGAAAGAGTACGGTCATCTTCTAATTGCTTACCAGCGAAAA 113344 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGG--- 34904 | | ||||| || ||| | || | || ||||| || | || ||||| || || Sbjct 113343 TTAAACGTTGTTGATCTGGTGGAATACCTTCCTTTTCTTGGATCTTTTGCTTAACATTAA 113284 Query 34905 --ATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTT 34962 ||||| ||| ||| | || |||| |||||| |||||||| || |||||||| Sbjct 113283 CAATGCTGTCGGAAGATT-----CAACCTCAAGGGTTATAGTCTTTCCGGTAAGGGTCTT 113229 Query 34963 TACAAAGATCTG 34974 |||||| ||||| Sbjct 113228 TACAAAAATCTG 113217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325688691690665