Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq748 152 8e-32 seq172 147 3e-30 seq179 114 2e-20 seq233 86.0 1e-11 >seq748 Length=202608 Score = 152 bits (168), Expect = 8e-32 Identities = 162/214 (76%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || ||||| || ||||| |||||| | || |||||| | | Sbjct 91200 TGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATTACTTTAGAAGTAGAATCTTCTG 91259 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| ||||||| ||| ||| || ||| ||||||||| |||||||| || |||| Sbjct 91260 ATACCATTGAAAATGTCAAAGCTAAGATTCAAGATAAAGAAGGTATTCCACCAGACCAAC 91319 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | || |||||||| |||||||||||||| ||| | || | | ||||| || | Sbjct 91320 AACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAACA 91379 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | ||||||||||| ||| | || ||||| ||||| Sbjct 91380 TTCAAAAAGAATCTACTCTTCACTTAGTTTTACG 91413 Score = 152 bits (168), Expect = 8e-32 Identities = 162/214 (76%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || ||||| || ||||| |||||| | || |||||| | | Sbjct 91656 TGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATTACTTTAGAAGTAGAATCTTCTG 91715 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| ||||||| ||| ||| || ||| ||||||||| |||||||| || |||| Sbjct 91716 ATACCATTGAAAATGTCAAAGCTAAGATTCAAGATAAAGAAGGTATTCCACCAGACCAAC 91775 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | || |||||||| |||||||||||||| ||| | || | | ||||| || | Sbjct 91776 AACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAACA 91835 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | ||||||||||| ||| | || ||||| ||||| Sbjct 91836 TTCAAAAAGAATCTACTCTTCACTTAGTCTTACG 91869 Score = 152 bits (168), Expect = 8e-32 Identities = 162/214 (76%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || ||||| || ||||| |||||| | || || ||| | | Sbjct 92112 TGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATTACTTTAGAAGTTGAATCTTCTG 92171 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| ||||||| ||| ||| || ||| ||| ||||| |||||||| || |||| Sbjct 92172 ATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGACCAAC 92231 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | || |||||||| |||||||||||||| ||| | || | | ||||| || | Sbjct 92232 AACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAACA 92291 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | ||||||||||| ||| |||| ||||| ||||| Sbjct 92292 TTCAAAAAGAATCTACTCTCCACTTAGTCTTACG 92325 Score = 149 bits (164), Expect = 1e-30 Identities = 179/242 (74%), Gaps = 1/242 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || ||||| || ||||| |||||| | || || ||| | | Sbjct 92340 TGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATTACTTTAGAAGTTGAATCTTCTG 92399 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| ||||||| ||| ||| || ||| ||| ||||| |||||||| || |||| Sbjct 92400 ATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAA-GAAGGTATTCCACCAGACCAAC 92458 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | || |||||||| |||||||||||||| ||| | || | | ||||| || | Sbjct 92459 AACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAACA 92518 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATTGA 146271 | ||||||||||| ||| |||| ||||| ||||| | | || || || |||| || | Sbjct 92519 TTCAAAAAGAATCTACTCTCCACTTAGTTTTACGTCTTCGTGGTGGAAATTAAAATTTTA 92578 Query 146272 AA 146273 || Sbjct 92579 AA 92580 Score = 143 bits (158), Expect = 4e-29 Identities = 160/214 (75%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || ||||| || ||||| || ||| | || || ||| | | Sbjct 90972 TGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATCACTTTAGAAGTTGAATCTTCTG 91031 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| ||||||| ||| ||| || ||| ||| ||||| |||||||| || |||| Sbjct 91032 ATACTATTGAAAATGTCAAAGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGACCAAC 91091 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | || |||||||| |||||||||||||| ||| | || | | ||||| || | Sbjct 91092 AACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAACA 91151 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | ||||||||||| ||| | || ||||| ||||| Sbjct 91152 TTCAAAAAGAATCTACTCTTCACTTAGTCTTACG 91185 Score = 143 bits (158), Expect = 4e-29 Identities = 160/214 (75%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || ||||| || || || || ||| | || || ||| | | Sbjct 91428 TGCAAATTTTTGTTAAGACTTTAACTGGTAAGACTATCACTTTAGAAGTTGAATCTTCTG 91487 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| ||||||| ||| ||| || ||| ||||||||| |||||||| || |||| Sbjct 91488 ATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAAAGAAGGTATTCCACCAGACCAAC 91547 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | || |||||||| |||||||||||||| ||| | || | | ||||| || | Sbjct 91548 AACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAACA 91607 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | ||||||||||| ||| | || ||||| ||||| Sbjct 91608 TTCAAAAAGAATCTACTCTTCACTTAGTTTTACG 91641 Score = 143 bits (158), Expect = 4e-29 Identities = 160/214 (75%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || ||||| || || || || ||| | || |||||| | | Sbjct 91884 TGCAAATTTTTGTTAAGACTTTAACTGGTAAGACTATCACTTTAGAAGTAGAATCTTCTG 91943 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| ||||||| ||| ||| || ||| ||| ||||| |||||||| || |||| Sbjct 91944 ATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGACCAAC 92003 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | || |||||||| |||||||||||||| ||| | || | | ||||| || | Sbjct 92004 AACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAACA 92063 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | ||||||||||| ||| | || ||||| ||||| Sbjct 92064 TTCAAAAAGAATCTACTCTTCACTTAGTCTTACG 92097 >seq172 Length=114120 Score = 147 bits (162), Expect = 3e-30 Identities = 161/214 (75%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| |||| || || || || || || || || | || |||||| | | Sbjct 113840 TGCAAATCTTCGTAAAGACCTTGACTGGTAAGACTATCACCTTAGAAGTAGAATCTTCTG 113899 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| ||||||| ||| |||||| ||| ||| ||||| ||||| || ||||||| Sbjct 113900 ACACTATTGAAAATGTCAAAGCTAAAATTCAAGATAAGGAAGGTATTCCTCCAGATCAAC 113959 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | || |||||||| ||||| |||||||| ||| | || | | |||||||||| Sbjct 113960 AACGTCTTATTTTTGCTGGTAAGCAATTAGAAGATGGACGTACTCTTTCTGATTATAATA 114019 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | ||||||||||| || |||| ||||| ||||| Sbjct 114020 TTCAAAAAGAATCTACACTCCACTTAGTCTTACG 114053 Score = 138 bits (152), Expect = 2e-27 Identities = 159/214 (74%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| |||| || ||||| || || || || || | || |||||| | | Sbjct 112700 TGCAAATCTTCGTAAAGACTTTAACTGGTAAGACTATCACCTTAGAAGTAGAATCTTCTG 112759 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| ||||||| ||| ||| || ||| || ||||| ||||| || || |||| Sbjct 112760 ACACTATTGAAAATGTCAAAGCTAAGATTCAAGACAAGGAAGGAATTCCTCCAGACCAAC 112819 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | || |||||||| ||||| |||||||| ||| | || | | |||||||||| Sbjct 112820 AACGTCTTATTTTTGCTGGTAAGCAATTAGAAGATGGACGTACTCTTTCTGATTATAATA 112879 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | ||||||||||| || |||| ||||| ||||| Sbjct 112880 TTCAAAAAGAATCTACACTCCACTTAGTCTTACG 112913 Score = 138 bits (152), Expect = 2e-27 Identities = 159/214 (74%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| |||| || || || || || || || || | || |||||| | | Sbjct 113156 TGCAAATCTTCGTAAAGACTTTGACTGGTAAGACTATCACCTTAGAAGTAGAATCTTCTG 113215 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| |||| || ||| ||| || ||| ||| ||||| |||||||| || |||| Sbjct 113216 ACACTATTGAAAACGTTAAAGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGACCAAC 113275 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | || |||||||| ||||| |||||||| ||| | || | | |||||||||| Sbjct 113276 AACGTCTTATTTTTGCTGGTAAGCAATTAGAAGATGGACGTACTCTTTCTGATTATAATA 113335 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | ||||||||||| || |||| ||||| ||||| Sbjct 113336 TTCAAAAAGAATCTACACTCCACTTAGTCTTACG 113369 Score = 138 bits (152), Expect = 2e-27 Identities = 159/214 (74%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| |||| || || || || || || || || | || |||||| | | Sbjct 113612 TGCAAATCTTCGTAAAGACTTTGACTGGTAAGACTATCACCTTAGAAGTAGAATCTTCTG 113671 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| |||| || ||| ||| || ||| ||| ||||| |||||||| || |||| Sbjct 113672 ACACTATTGAAAACGTTAAAGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGACCAAC 113731 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | || |||||||| ||||| |||||||| ||| | || | | |||||||||| Sbjct 113732 AACGTCTTATTTTTGCTGGTAAGCAATTAGAAGATGGACGTACTCTTTCTGATTATAATA 113791 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | ||||||||||| || |||| ||||| ||||| Sbjct 113792 TTCAAAAAGAATCTACACTCCACTTAGTCTTACG 113825 Score = 134 bits (148), Expect = 2e-26 Identities = 158/214 (74%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| |||| || || || || || || || || | || |||||| | | Sbjct 112928 TGCAAATCTTCGTAAAGACCTTGACTGGTAAGACTATCACCTTAGAAGTAGAATCTTCTG 112987 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| ||||||| ||| ||| || ||| || ||||| ||||| || || |||| Sbjct 112988 ACACTATTGAAAATGTCAAAGCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAAC 113047 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | || |||||||| ||||| |||||||| ||| | || | | |||||||||| Sbjct 113048 AACGTCTTATTTTTGCTGGTAAGCAATTAGAAGATGGACGTACTCTTTCTGATTATAATA 113107 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | ||||||||||| || ||||||| || ||||| Sbjct 113108 TTCAAAAAGAATCTACACTCCATTTGGTCTTACG 113141 Score = 134 bits (148), Expect = 2e-26 Identities = 158/214 (74%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| |||| || || || || || || || || | || |||||| | | Sbjct 113384 TGCAAATCTTCGTAAAGACCTTGACTGGTAAGACTATCACCTTAGAAGTAGAATCTTCTG 113443 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| ||||||| ||| ||| || ||| || ||||| ||||| || || |||| Sbjct 113444 ACACTATTGAAAATGTCAAAGCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAAC 113503 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | || |||||||| ||||| |||||||| ||| | || | | |||||||||| Sbjct 113504 AACGTCTTATTTTTGCTGGTAAGCAATTAGAAGATGGACGTACTCTTTCTGATTATAATA 113563 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | ||||||||||| || ||||||| || ||||| Sbjct 113564 TTCAAAAAGAATCTACACTCCATTTGGTCTTACG 113597 >seq179 Length=111796 Score = 114 bits (126), Expect = 2e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 146046 AAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAAT 146105 ||||| | || || || || ||||| | || || ||| | || |||||| ||||| Sbjct 96559 AAAACTCTCACTGGTAAGACCATTACCTTAGAAGTTGAATCTTCTGACACTATTGAAAAT 96500 Query 146106 GTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTT 146165 || ||| ||| || ||| ||| ||||| |||||||| ||||||||| | | || ||| Sbjct 96499 GTCAAAGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGATCAACAACGTTTAATCTTT 96440 Query 146166 GCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCG 146225 || |||||||||||||| ||| | | || | | ||||| || || ||||||||||| Sbjct 96439 GCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAACATTCAAAAAGAATCT 96380 Query 146226 ACTATCCATTTAGTATTACGATTAAGAGGAGGT 146258 ||| | ||| | || | || ||| | || ||| Sbjct 96379 ACTCTTCATCTTGTTCTTCGTTTACGTGGTGGT 96347 >seq233 Length=93418 Score = 86.0 bits (94), Expect = 1e-11 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 146037 ATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACT 146096 || ||| | ||||| | || ||||| || || || |||| || || | ||| | | Sbjct 52006 ATTTTCGTCAAAACCCTTACTGGAAAGACTATAACCCTTGAGGTTGAGTCTTCCGACAGT 51947 Query 146097 ATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGA 146156 ||| ||||| || || || || ||| || ||||| |||||||| || |||||| | Sbjct 51946 ATTGTCAATGTTAAGAACAAGATTCAAGAAAAGGAAGGTATTCCACCAGACCAACAACGT 51887 Query 146157 CTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAA 146216 || || || || |||||||||||||| ||| | ||||| | | || || || || ||| Sbjct 51886 CTTATCTTCGCCGGTAAACAATTAGAAGATGACAGAACCCTTTCTGACTACAACATTCAA 51827 Query 146217 AA 146218 || Sbjct 51826 AA 51825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786156228972200