Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq748 156 3e-33 seq179 150 1e-31 seq172 147 2e-30 seq304 100 2e-16 >seq748 Length=202608 Score = 156 bits (172), Expect = 3e-33 Identities = 162/210 (77%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 || || ||||| || ||||||||||||||||| ||||| | || || || ||| || Sbjct 91407 ACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCT 91348 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 | |||||| |||||| | || | | ||| || || || |||||||| ||||| ||||| Sbjct 91347 AATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATCTTG- 91289 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 ||| || | ||||||| |||| | || |||||| ||||||||| | ||| |||||||| Sbjct 91288 AATCTTAGCTTTGACATTTTCAATGGTATCAGAAGATTCTACTTCTAAAGTAATAGTTTT 91229 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||||| || |||||||| || ||||| Sbjct 91228 ACCAGTTAAAGTCTTAACAAAAATTTGCAT 91199 Score = 156 bits (172), Expect = 3e-33 Identities = 162/210 (77%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 || || ||||| || ||||||||||||||||| ||||| | || || || ||| || Sbjct 91863 ACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCT 91804 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 | |||||| |||||| | || | | ||| || || || |||||||| ||||| ||||| Sbjct 91803 AATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATCTTG- 91745 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 ||| || | ||||||| |||| | || |||||| ||||||||| | ||| |||||||| Sbjct 91744 AATCTTAGCTTTGACATTTTCAATGGTATCAGAAGATTCTACTTCTAAAGTAATAGTTTT 91685 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||||| || |||||||| || ||||| Sbjct 91684 ACCAGTTAAAGTCTTAACAAAAATTTGCAT 91655 Score = 152 bits (168), Expect = 4e-32 Identities = 163/213 (77%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 || || ||||| || ||||||||||||||||| ||||| | || || || ||| || Sbjct 91179 ACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCT 91120 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 | |||||| |||||| | || | | ||| || || || |||||||| || || ||||| Sbjct 91119 AATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATCTTG- 91061 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 ||| || | ||||||| |||| | ||| |||||| ||| ||||| | ||| |||||||| Sbjct 91060 AATCTTAGCTTTGACATTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTGATAGTTTT 91001 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 |||||||| || |||||||| || ||||| || Sbjct 91000 ACCAGTTAAAGTCTTAACAAAAATTTGCATCTT 90968 Score = 147 bits (162), Expect = 2e-30 Identities = 160/210 (76%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 || || ||||| || ||||||||||||||||| ||||| | || || || ||| || Sbjct 91635 ACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCT 91576 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 | |||||| |||||| | || | | ||| || || || |||||||| ||||| ||||| Sbjct 91575 AATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATCTTG- 91517 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 ||| || | ||| ||| |||| | ||| |||||| ||| ||||| | ||| ||||| || Sbjct 91516 AATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTGATAGTCTT 91457 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||||| || |||||||| || ||||| Sbjct 91456 ACCAGTTAAAGTCTTAACAAAAATTTGCAT 91427 Score = 147 bits (162), Expect = 2e-30 Identities = 160/210 (76%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 || || ||||| || ||||||||||||||||| ||||| | || || || ||| || Sbjct 92091 ACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCT 92032 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 | |||||| |||||| | || | | ||| || || || |||||||| || || ||||| Sbjct 92031 AATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATCTTG- 91973 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 ||| || | ||| ||| |||| | ||| |||||| ||||||||| | ||| ||||| || Sbjct 91972 AATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCTACTTCTAAAGTGATAGTCTT 91913 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||||| || |||||||| || ||||| Sbjct 91912 ACCAGTTAAAGTCTTAACAAAAATTTGCAT 91883 Score = 141 bits (156), Expect = 7e-29 Identities = 159/210 (76%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 || || || || || ||||||||||||||||| ||||| | || || || ||| || Sbjct 92319 ACTAAGTGGAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCT 92260 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 | |||||| |||||| | || | | ||| || || || |||||||| || || ||||| Sbjct 92259 AATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATCTTG- 92201 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 ||| || | ||| ||| |||| | ||| |||||| ||| ||||| | ||| |||||||| Sbjct 92200 AATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTAATAGTTTT 92141 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||||| || |||||||| || ||||| Sbjct 92140 ACCAGTTAAAGTCTTAACAAAAATTTGCAT 92111 Score = 138 bits (152), Expect = 9e-28 Identities = 159/210 (76%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 || || || || || ||||||||||||||||| ||||| | || || || ||| || Sbjct 92546 ACTAAGTGGAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCT 92487 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 | |||||| |||||| | || | | ||| || || || |||||||| || || ||||| Sbjct 92486 AATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTC-TTATCTTG- 92429 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 ||| || | ||| ||| |||| | ||| |||||| ||| ||||| | ||| |||||||| Sbjct 92428 AATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTAATAGTTTT 92369 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||||| || |||||||| || ||||| Sbjct 92368 ACCAGTTAAAGTCTTAACAAAAATTTGCAT 92339 >seq179 Length=111796 Score = 150 bits (166), Expect = 1e-31 Identities = 164/215 (76%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 29569 AAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGA 29628 ||||| || || | |||||| || ||||||||||||||||| ||||| | || || ||| Sbjct 96357 AAACGAAGAACAAGATGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGA 96416 Query 29629 GAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCT 29688 ||| || | |||||| || ||| | || || | ||| ||||| || |||||||| || Sbjct 96417 CCATCTTCTAATTGTTTACCGGCAAAGATTAAACGTTGTTGATCTGGTGGAATACCTTCC 96476 Query 29689 TTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGT 29747 || ||||| ||| || | ||||||| |||| | |||||||||| ||| ||||| | || Sbjct 96477 TTATCTTG-AATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGATTCAACTTCTAAGGT 96535 Query 29748 TATAGTTTTGCCAGTTAAGGTTTTAACAAATATCT 29782 || || || ||||| | ||||||||||| |||| Sbjct 96536 AATGGTCTTACCAGTGAGAGTTTTAACAAAAATCT 96570 >seq172 Length=114120 Score = 147 bits (162), Expect = 2e-30 Identities = 160/210 (76%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 |||||||| || || |||||||||||||| |||||||| | || || || ||| || Sbjct 113135 ACCAAATGGAGTGTAGATTCTTTTTGAATATTATAATCAGAAAGAGTACGTCCATCTTCT 113076 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 | ||| || |||||| | || | | ||| || || || |||||||| || |||||||| Sbjct 113075 AATTGCTTACCAGCAAAAATAAGACGTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTG- 113017 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 ||| || | ||||||| |||| | |||||||||| ||||||||| | || ||||| || Sbjct 113016 AATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGATTCTACTTCTAAGGTGATAGTCTT 112957 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| ||||| || || || || ||||| Sbjct 112956 ACCAGTCAAGGTCTTTACGAAGATTTGCAT 112927 Score = 147 bits (162), Expect = 2e-30 Identities = 160/210 (76%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 |||||||| || || |||||||||||||| |||||||| | || || || ||| || Sbjct 113591 ACCAAATGGAGTGTAGATTCTTTTTGAATATTATAATCAGAAAGAGTACGTCCATCTTCT 113532 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 | ||| || |||||| | || | | ||| || || || |||||||| || |||||||| Sbjct 113531 AATTGCTTACCAGCAAAAATAAGACGTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTG- 113473 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 ||| || | ||||||| |||| | |||||||||| ||||||||| | || ||||| || Sbjct 113472 AATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGATTCTACTTCTAAGGTGATAGTCTT 113413 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| ||||| || || || || ||||| Sbjct 113412 ACCAGTCAAGGTCTTTACGAAGATTTGCAT 113383 Score = 141 bits (156), Expect = 7e-29 Identities = 159/210 (76%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 || || || || || |||||||||||||| |||||||| | || || || ||| || Sbjct 114047 ACTAAGTGGAGTGTAGATTCTTTTTGAATATTATAATCAGAAAGAGTACGTCCATCTTCT 113988 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 | ||| || |||||| | || | | ||| ||||| || |||||||| || || ||||| Sbjct 113987 AATTGCTTACCAGCAAAAATAAGACGTTGTTGATCTGGAGGAATACCTTCCTTATCTTG- 113929 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 |||||| | ||||||| |||| | |||||||||| ||||||||| | || ||||| || Sbjct 113928 AATTTTAGCTTTGACATTTTCAATAGTGTCAGAAGATTCTACTTCTAAGGTGATAGTCTT 113869 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| ||||| || || || || ||||| Sbjct 113868 ACCAGTCAAGGTCTTTACGAAGATTTGCAT 113839 Score = 138 bits (152), Expect = 9e-28 Identities = 160/213 (75%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 || || || || || |||||||||||||| |||||||| | || || || ||| || Sbjct 112907 ACTAAGTGGAGTGTAGATTCTTTTTGAATATTATAATCAGAAAGAGTACGTCCATCTTCT 112848 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 | ||| || |||||| | || | | ||| || || || ||||| || || |||||||| Sbjct 112847 AATTGCTTACCAGCAAAAATAAGACGTTGTTGGTCTGGAGGAATTCCTTCCTTGTCTTG- 112789 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 ||| || | ||||||| |||| | |||||||||| ||||||||| | || ||||| || Sbjct 112788 AATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGATTCTACTTCTAAGGTGATAGTCTT 112729 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 |||||||| || || || || || |||||||| Sbjct 112728 ACCAGTTAAAGTCTTTACGAAGATTTGCATTTT 112696 Score = 120 bits (132), Expect = 2e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 || || || || || |||||||||||||| |||||||| | || || || ||| || Sbjct 113363 ACTAAGTGGAGTGTAGATTCTTTTTGAATATTATAATCAGAAAGAGTACGTCCATCTTCT 113304 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 | ||| || |||||| | || | | ||| || || || |||||||| || || ||||| Sbjct 113303 AATTGCTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATCTTG- 113245 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 ||| || | ||| || |||| | |||||||||| ||||||||| | || ||||| || Sbjct 113244 AATCTTAGCTTTAACGTTTTCAATAGTGTCAGAAGATTCTACTTCTAAGGTGATAGTCTT 113185 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || || || || || ||||| Sbjct 113184 ACCAGTCAAAGTCTTTACGAAGATTTGCAT 113155 Score = 120 bits (132), Expect = 2e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 || || || || || |||||||||||||| |||||||| | || || || ||| || Sbjct 113819 ACTAAGTGGAGTGTAGATTCTTTTTGAATATTATAATCAGAAAGAGTACGTCCATCTTCT 113760 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 | ||| || |||||| | || | | ||| || || || |||||||| || || ||||| Sbjct 113759 AATTGCTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATCTTG- 113701 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 ||| || | ||| || |||| | |||||||||| ||||||||| | || ||||| || Sbjct 113700 AATCTTAGCTTTAACGTTTTCAATAGTGTCAGAAGATTCTACTTCTAAGGTGATAGTCTT 113641 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || || || || || ||||| Sbjct 113640 ACCAGTCAAAGTCTTTACGAAGATTTGCAT 113611 >seq304 Length=284809 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 29569 AAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGA 29628 ||||| || || | ||| | || ||||| ||||||||||| || || | || || ||| Sbjct 189510 AAACGAAGGACAAGATGTAAAGTAGATTCCTTTTGAATGTTGTAGTCAGAAAGAGTACGA 189569 Query 29629 GAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCT 29688 ||| || | ||| || || || | || | | ||| || || || || ||||| || Sbjct 189570 CCATCTTCTAATTGCTTACCGGCGAAGATAAGACGTTGTTGGTCTGGTGGGATACCTTCC 189629 Query 29689 TTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTT 29748 || ||||| | || ||||||| |||| | |||||| || ||| || ||||| || Sbjct 189630 TTATCTTGGATCTTAGCTTTGACATTTTCAATAGTGTCGGAGGATTCAACCTCAAGGGTA 189689 Query 29749 ATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || | |||||| ||||| || ||||| Sbjct 189690 ATGGTCTTACCCGTAAGGGTTTTGACAAAGATTTGCAT 189727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385214340820935