Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq227 122 3e-22 seq137 89.7 2e-12 >seq227 Length=95025 Score = 122 bits (134), Expect = 3e-22 Identities = 141/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 46569 GGTaaaaaaaCAATTTTGTTTTTAGACGAAATACATCGTTTCAATAAAGGACAGCAAGAT 46628 || ||||| |||| ||||| |||| ||||||||| | || |||||| ||| |||||| Sbjct 31087 GGAAAAAAGGCAATACTGTTTATAGATGAAATACATAGATTTAATAAATTACAACAAGAT 31028 Query 46629 TCGTTATTACCTTATGTTGAAGATGGAACAATTACGTTAATTGGTGCAACAACTGAAAAT 46688 || |||||| ||| |||||| | || || |||| ||||| |||||||||||||||||| Sbjct 31027 TCTTTATTAACTTGGGTTGAAAAAGGTTCATTTACATTAATAGGTGCAACAACTGAAAAT 30968 Query 46689 CCATTTTTTGAAATTAACGGAGCTTTAATTTCTAGATCAACAATATTCAAGTTGGAACCA 46748 || | ||| || |||| |||||| | ||||| | | | || | || || | Sbjct 30967 CCTTCATTTAAACTTAATTCGGCTTTATTAAGTAGATGTAGAGTTTTTCAATTAAAAAAA 30908 Query 46749 TTAAGTAAAA 46758 |||||||||| Sbjct 30907 TTAAGTAAAA 30898 >seq137 Length=344580 Score = 89.7 bits (98), Expect = 2e-12 Identities = 101/134 (75%), Gaps = 1/134 (1%) Strand=Plus/Minus Query 46572 aaaaaaaCAATTTTGTTTTTAGACGAAATACATCGTTTCAATAAAGGACAGCAAGATTCG 46631 |||||| |||| || ||| |||| ||||| ||| | || |||||| ||| |||||||| Sbjct 255895 AAAAAAGCAATATTATTTATAGATGAAATTCATAGATTTAATAAATTACAACAAGATTCT 255836 Query 46632 TTATTACCTTATGTTGAAGATGGAACAATTACGTTAATTGGTGCAACAACTGAAAATCCA 46691 ||| || | | |||||| ||| | ||| |||||||| || || ||||||||||| Sbjct 255835 TTACTATCATGGGTTGAACGTGGTTCTTTTATTTTAATTGGAGCCACTACTGAAAATCC- 255777 Query 46692 TTTTTTGAAATTAA 46705 || || ||||||| Sbjct 255776 TTCATTTAAATTAA 255763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1591889289775680