Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq748 120 2e-22 seq179 104 2e-17 >seq748 Length=202608 Score = 120 bits (132), Expect = 2e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | |||||| || || || ||||| |||||||| ||||||||||| || Sbjct 91426 ACCACCACGAAGACGTAAAACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGA 91367 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || ||| | || || |||||||| || |||||||| | ||| || || ||| | || Sbjct 91366 AAGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGG 91307 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||| || ||| || | || |||| || | ||| || ||||| | Sbjct 91306 AATACCTTCTTTATCTTGAATCTT-AGCTTTGACATTTTCAATGGTATCAGAAGATTCTA 91248 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || |||||||| ||||| || || ||||| || |||||| Sbjct 91247 CTTCTAAAGTAATAGTTTTACCAGTTAAAGTCTTAACAAAAATTTGCATA 91198 Score = 120 bits (132), Expect = 2e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | |||||| || || || ||||| |||||||| ||||||||||| || Sbjct 91654 ACCACCACGAAGACGTAAAACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGA 91595 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || ||| | || || |||||||| || |||||||| | ||| || || ||| | || Sbjct 91594 AAGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGG 91535 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||| || ||| || | || ||||| || | || || ||||| | Sbjct 91534 AATACCTTCTTTATCTTGAATCTT-AGCTTTAACATTTTCAATAGTATCAGAAGATTCAA 91476 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| || ||||| ||||| || || ||||| || |||||| Sbjct 91475 CTTCTAAAGTGATAGTCTTACCAGTTAAAGTCTTAACAAAAATTTGCATA 91426 Score = 120 bits (132), Expect = 2e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | |||||| || || || ||||| |||||||| ||||||||||| || Sbjct 91882 ACCACCACGAAGACGTAAGACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGA 91823 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || ||| | || || |||||||| || |||||||| | ||| || || ||| | || Sbjct 91822 AAGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGG 91763 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||| || ||| || | || |||| || | ||| || ||||| | Sbjct 91762 AATACCTTCTTTATCTTGAATCTT-AGCTTTGACATTTTCAATGGTATCAGAAGATTCTA 91704 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || |||||||| ||||| || || ||||| || |||||| Sbjct 91703 CTTCTAAAGTAATAGTTTTACCAGTTAAAGTCTTAACAAAAATTTGCATA 91654 Score = 114 bits (126), Expect = 8e-21 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | |||||| || || || ||||| |||||||| ||||||||||| || Sbjct 92110 ACCACCACGAAGACGTAAGACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGA 92051 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || ||| | || || |||||||| || |||||||| | ||| || || ||| | || Sbjct 92050 AAGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGG 91991 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| || || ||| || | || ||||| || | || || ||||| | Sbjct 91990 AATACCTTCCTTATCTTGAATCTT-AGCTTTAACATTTTCAATAGTATCAGAAGATTCTA 91932 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| || ||||| ||||| || || ||||| || |||||| Sbjct 91931 CTTCTAAAGTGATAGTCTTACCAGTTAAAGTCTTAACAAAAATTTGCATA 91882 Score = 114 bits (126), Expect = 8e-21 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | |||||| || || || ||||| |||||||| ||||||||||| || Sbjct 92338 ACCACCACGAAGACGTAAGACTAAGTGGAGAGTAGATTCTTTTTGAATGTTGTAATCAGA 92279 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || ||| | || || |||||||| || |||||||| | ||| || || ||| | || Sbjct 92278 AAGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGG 92219 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| || || ||| || | || ||||| || | || || ||||| | Sbjct 92218 AATACCTTCCTTATCTTGAATCTT-AGCTTTAACATTTTCAATAGTATCAGAAGATTCAA 92160 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || |||||||| ||||| || || ||||| || |||||| Sbjct 92159 CTTCTAAAGTAATAGTTTTACCAGTTAAAGTCTTAACAAAAATTTGCATA 92110 Score = 113 bits (124), Expect = 3e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | |||||| || || || ||||| |||||||| ||||||||||| || Sbjct 91198 ACCACCACGAAGACGTAAGACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGA 91139 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || ||| | || || |||||||| || |||||||| | ||| || || ||| | || Sbjct 91138 AAGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGG 91079 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| || || ||| || | || |||| || | || || ||||| | Sbjct 91078 AATACCTTCCTTATCTTGAATCTT-AGCTTTGACATTTTCAATAGTATCAGAAGATTCAA 91020 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| |||||||| ||||| || || ||||| || ||||| Sbjct 91019 CTTCTAAAGTGATAGTTTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 90971 Score = 109 bits (120), Expect = 4e-19 Identities = 164/229 (72%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | |||||| || || || ||||| |||||||| ||||||||||| || Sbjct 92564 CCACCACGAAGACGTAAAACTAAGTGGAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 92505 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || ||| | || || |||||||| || |||||||| | ||| || || ||| | || Sbjct 92504 AGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGA 92445 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | |||||| || || ||| || | || ||||| || | || || ||||| || Sbjct 92444 ATACCTTC-TTATCTTGAATCTT-AGCTTTAACATTTTCAATAGTATCAGAAGATTCAAC 92387 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | || || |||||||| ||||| || || ||||| || |||||| Sbjct 92386 TTCTAAAGTAATAGTTTTACCAGTTAAAGTCTTAACAAAAATTTGCATA 92338 >seq179 Length=111796 Score = 104 bits (114), Expect = 2e-17 Identities = 160/226 (71%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||| | ||||| | || | ||| ||||| |||||||| ||||||||||| | Sbjct 96346 CACCACCACGTAAACGAAGAACAAGATGAAGAGTAGATTCTTTTTGAATGTTGTAATCAG 96405 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | || || || | || || |||||||| |||||||| || ||||| || |||||| | | Sbjct 96406 AAAGAGTACGACCATCTTCTAATTGTTTACCGGCAAAGATTAAACGTTGTTGATCTGGTG 96465 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | |||||| || || ||| || | || |||| || | ||||| ||||| Sbjct 96466 GAATACCTTCCTTATCTTGAATCTT-AGCTTTGACATTTTCAATAGTGTCAGAAGATTCA 96524 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCT 33745 || || | || || || ||||| || | ||||| ||||| |||| Sbjct 96525 ACTTCTAAGGTAATGGTCTTACCAGTGAGAGTTTTAACAAAAATCT 96570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328699853707200