Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq748 122 2e-22 seq179 114 3e-20 seq172 102 2e-16 seq304 87.8 4e-12 >seq748 Length=202608 Score = 122 bits (134), Expect = 2e-22 Identities = 185/258 (72%), Gaps = 8/258 (3%) Strand=Plus/Plus Query 206134 TATATTTTAAGAAATATATAAAGTAAGGCTAAAATGTACCAGATATTTTGCAAAACGCTC 206193 |||||||| || |||| ||||| || | || ||| || || ||| || || | Sbjct 90941 TATATTTTTAGTAATAAATAAA-TA--GTAAAGATG---CAAATTTTTGTTAAGACTTTA 90994 Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT-AAAGCA 206252 || || ||||| |||||||| ||||| ||| |||||| || | ||| || ||||| Sbjct 90995 ACTGGTAAAACTATCACTTTAGAAGTTGAATCTTCTGATACTATTGAAAATGTCAAAGCT 91054 Query 206253 AAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAA 206312 || ||||||||| || ||||| ||| || ||| ||| | ||||| || || || || Sbjct 91055 AA-GATTCAAGATAAGGAAGGTATTCCACCAGACCAACAACGTCTTATTTTTGCTGGTAA 91113 Query 206313 GCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 || || ||||||||| | ||| | | ||||||||| | || ||||| ||||||||||| Sbjct 91114 ACAATTAGAAGATGGACGTACTCTTTCTGATTACAACATTCAAAAAGAATCTACTCTTCA 91173 Query 206373 CCTTGTTTTGAGACTTCG 206390 | | || || | ||||| Sbjct 91174 CTTAGTCTTACGTCTTCG 91191 Score = 120 bits (132), Expect = 7e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT-AAAGCA 206252 || || ||||| || ||||| ||||| ||| |||||| || | ||| || ||||| Sbjct 91223 ACTGGTAAAACTATTACTTTAGAAGTAGAATCTTCTGATACCATTGAAAATGTCAAAGCT 91282 Query 206253 AAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAA 206312 || ||||||||| |||||||| ||| || ||| ||| | ||||| || || || || Sbjct 91283 AA-GATTCAAGATAAAGAAGGTATTCCACCAGACCAACAACGTCTTATTTTTGCTGGTAA 91341 Query 206313 GCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 || || ||||||||| | ||| | | ||||||||| | || ||||| ||||||||||| Sbjct 91342 ACAATTAGAAGATGGACGTACTCTTTCTGATTACAACATTCAAAAAGAATCTACTCTTCA 91401 Query 206373 CCTTGTTTTGAGACTTCG 206390 | | ||||| | ||||| Sbjct 91402 CTTAGTTTTACGTCTTCG 91419 Score = 120 bits (132), Expect = 7e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT-AAAGCA 206252 || || || || |||||||| ||||| ||| |||||| || | ||| || ||||| Sbjct 91451 ACTGGTAAGACTATCACTTTAGAAGTTGAATCTTCTGATACTATTGAAAATGTTAAAGCT 91510 Query 206253 AAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAA 206312 || ||||||||| |||||||| ||| || ||| ||| | ||||| || || || || Sbjct 91511 AA-GATTCAAGATAAAGAAGGTATTCCACCAGACCAACAACGTCTTATTTTTGCTGGTAA 91569 Query 206313 GCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 || || ||||||||| | ||| | | ||||||||| | || ||||| ||||||||||| Sbjct 91570 ACAATTAGAAGATGGACGTACTCTTTCTGATTACAACATTCAAAAAGAATCTACTCTTCA 91629 Query 206373 CCTTGTTTTGAGACTTCG 206390 | | ||||| | ||||| Sbjct 91630 CTTAGTTTTACGTCTTCG 91647 Score = 116 bits (128), Expect = 9e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT-AAAGCA 206252 || || ||||| || ||||| ||||| ||| |||||| || | ||| || ||||| Sbjct 91679 ACTGGTAAAACTATTACTTTAGAAGTAGAATCTTCTGATACCATTGAAAATGTCAAAGCT 91738 Query 206253 AAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAA 206312 || ||||||||| |||||||| ||| || ||| ||| | ||||| || || || || Sbjct 91739 AA-GATTCAAGATAAAGAAGGTATTCCACCAGACCAACAACGTCTTATTTTTGCTGGTAA 91797 Query 206313 GCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 || || ||||||||| | ||| | | ||||||||| | || ||||| ||||||||||| Sbjct 91798 ACAATTAGAAGATGGACGTACTCTTTCTGATTACAACATTCAAAAAGAATCTACTCTTCA 91857 Query 206373 CCTTGTTTTGAGACTTCG 206390 | | || || | ||||| Sbjct 91858 CTTAGTCTTACGTCTTCG 91875 Score = 111 bits (122), Expect = 4e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT-AAAGCA 206252 || || || || |||||||| ||||| ||| |||||| || | ||| || ||||| Sbjct 91907 ACTGGTAAGACTATCACTTTAGAAGTAGAATCTTCTGATACTATTGAAAATGTTAAAGCT 91966 Query 206253 AAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAA 206312 || ||||||||| || ||||| ||| || ||| ||| | ||||| || || || || Sbjct 91967 AA-GATTCAAGATAAGGAAGGTATTCCACCAGACCAACAACGTCTTATTTTTGCTGGTAA 92025 Query 206313 GCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 || || ||||||||| | ||| | | ||||||||| | || ||||| ||||||||||| Sbjct 92026 ACAATTAGAAGATGGACGTACTCTTTCTGATTACAACATTCAAAAAGAATCTACTCTTCA 92085 Query 206373 CCTTGTTTTGAGACTTCG 206390 | | || || | ||||| Sbjct 92086 CTTAGTCTTACGTCTTCG 92103 Score = 107 bits (118), Expect = 5e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT-AAAGCA 206252 || || ||||| || ||||| ||||| ||| |||||| || | ||| || ||||| Sbjct 92135 ACTGGTAAAACTATTACTTTAGAAGTTGAATCTTCTGATACTATTGAAAATGTTAAAGCT 92194 Query 206253 AAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAA 206312 || ||||||||| || ||||| ||| || ||| ||| | ||||| || || || || Sbjct 92195 AA-GATTCAAGATAAGGAAGGTATTCCACCAGACCAACAACGTCTTATTTTTGCTGGTAA 92253 Query 206313 GCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 || || ||||||||| | ||| | | ||||||||| | || ||||| |||||||| || Sbjct 92254 ACAATTAGAAGATGGACGTACTCTTTCTGATTACAACATTCAAAAAGAATCTACTCTCCA 92313 Query 206373 CCTTGTTTTGAGACTTCG 206390 | | || || | ||||| Sbjct 92314 CTTAGTCTTACGTCTTCG 92331 Score = 107 bits (118), Expect = 5e-18 Identities = 145/198 (73%), Gaps = 3/198 (2%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT-AAAGCA 206252 || || ||||| || ||||| ||||| ||| |||||| || | ||| || ||||| Sbjct 92363 ACTGGTAAAACTATTACTTTAGAAGTTGAATCTTCTGATACTATTGAAAATGTTAAAGCT 92422 Query 206253 AAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAA 206312 || |||||||| | ||||||| ||| || ||| ||| | ||||| || || || || Sbjct 92423 AA-GATTCAAG-ATAAGAAGGTATTCCACCAGACCAACAACGTCTTATTTTTGCTGGTAA 92480 Query 206313 GCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 || || ||||||||| | ||| | | ||||||||| | || ||||| |||||||| || Sbjct 92481 ACAATTAGAAGATGGACGTACTCTTTCTGATTACAACATTCAAAAAGAATCTACTCTCCA 92540 Query 206373 CCTTGTTTTGAGACTTCG 206390 | | ||||| | ||||| Sbjct 92541 CTTAGTTTTACGTCTTCG 92558 >seq179 Length=111796 Score = 114 bits (126), Expect = 3e-20 Identities = 151/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 206174 AGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACA 206233 |||| ||| ||||| ||||| || || || || || || ||||| ||| |||||||| Sbjct 96570 AGATTTTTGTTAAAACTCTCACTGGTAAGACCATTACCTTAGAAGTTGAATCTTCTGACA 96511 Query 206234 CAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 | | ||| || ||||| || ||||||||| || ||||| ||| || || ||| Sbjct 96510 CTATTGAAAATGTCAAAGCTAA-GATTCAAGATAAGGAAGGTATTCCACCAGATCAACAA 96452 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | | ||||| ||||| || || || |||||||| | ||| | | ||||||||| | Sbjct 96451 CGTTTAATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAACATT 96392 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTT 206379 || ||||| ||||||||||| |||||| Sbjct 96391 CAAAAAGAATCTACTCTTCATCTTGTT 96365 >seq172 Length=114120 Score = 102 bits (112), Expect = 2e-16 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT-AAAGCA 206252 || || || || ||||| || ||||| ||| ||||||||| | ||| || ||||| Sbjct 112723 ACTGGTAAGACTATCACCTTAGAAGTAGAATCTTCTGACACTATTGAAAATGTCAAAGCT 112782 Query 206253 AAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAA 206312 || ||||||||| || ||||||||| || ||| ||| | ||||| || || || || Sbjct 112783 AA-GATTCAAGACAAGGAAGGAATTCCTCCAGACCAACAACGTCTTATTTTTGCTGGTAA 112841 Query 206313 GCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 ||| || ||||||||| | ||| | | ||||| || | || ||||| ||||| || || Sbjct 112842 GCAATTAGAAGATGGACGTACTCTTTCTGATTATAATATTCAAAAAGAATCTACACTCCA 112901 Query 206373 CCTTGTTTTGAGACTTCG 206390 | | || || | ||||| Sbjct 112902 CTTAGTCTTACGTCTTCG 112919 Score = 98.7 bits (108), Expect = 2e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT-AAAGCA 206252 || || || || ||||| || ||||| ||| ||||||||| | ||| || ||||| Sbjct 113179 ACTGGTAAGACTATCACCTTAGAAGTAGAATCTTCTGACACTATTGAAAACGTTAAAGCT 113238 Query 206253 AAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAA 206312 || ||||||||| || ||||| ||| || ||| ||| | ||||| || || || || Sbjct 113239 AA-GATTCAAGATAAGGAAGGTATTCCACCAGACCAACAACGTCTTATTTTTGCTGGTAA 113297 Query 206313 GCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 ||| || ||||||||| | ||| | | ||||| || | || ||||| ||||| || || Sbjct 113298 GCAATTAGAAGATGGACGTACTCTTTCTGATTATAATATTCAAAAAGAATCTACACTCCA 113357 Query 206373 CCTTGTTTTGAGACTTCG 206390 | | || || | ||||| Sbjct 113358 CTTAGTCTTACGTCTTCG 113375 Score = 98.7 bits (108), Expect = 2e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT-AAAGCA 206252 || || || || ||||| || ||||| ||| ||||||||| | ||| || ||||| Sbjct 113635 ACTGGTAAGACTATCACCTTAGAAGTAGAATCTTCTGACACTATTGAAAACGTTAAAGCT 113694 Query 206253 AAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAA 206312 || ||||||||| || ||||| ||| || ||| ||| | ||||| || || || || Sbjct 113695 AA-GATTCAAGATAAGGAAGGTATTCCACCAGACCAACAACGTCTTATTTTTGCTGGTAA 113753 Query 206313 GCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 ||| || ||||||||| | ||| | | ||||| || | || ||||| ||||| || || Sbjct 113754 GCAATTAGAAGATGGACGTACTCTTTCTGATTATAATATTCAAAAAGAATCTACACTCCA 113813 Query 206373 CCTTGTTTTGAGACTTCG 206390 | | || || | ||||| Sbjct 113814 CTTAGTCTTACGTCTTCG 113831 Score = 93.3 bits (102), Expect = 1e-13 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT-AAAGCA 206252 || || || || ||||| || ||||| ||| ||||||||| | ||| || ||||| Sbjct 112951 ACTGGTAAGACTATCACCTTAGAAGTAGAATCTTCTGACACTATTGAAAATGTCAAAGCT 113010 Query 206253 AAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAA 206312 || ||||||||| || ||||| ||| || ||| ||| | ||||| || || || || Sbjct 113011 AA-GATTCAAGACAAGGAAGGTATTCCTCCAGACCAACAACGTCTTATTTTTGCTGGTAA 113069 Query 206313 GCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 ||| || ||||||||| | ||| | | ||||| || | || ||||| ||||| || || Sbjct 113070 GCAATTAGAAGATGGACGTACTCTTTCTGATTATAATATTCAAAAAGAATCTACACTCCA 113129 Query 206373 CCTTGTTTTGAGACTTCG 206390 | || || | ||||| Sbjct 113130 TTTGGTCTTACGTCTTCG 113147 Score = 93.3 bits (102), Expect = 1e-13 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT-AAAGCA 206252 || || || || ||||| || ||||| ||| ||||||||| | ||| || ||||| Sbjct 113407 ACTGGTAAGACTATCACCTTAGAAGTAGAATCTTCTGACACTATTGAAAATGTCAAAGCT 113466 Query 206253 AAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAA 206312 || ||||||||| || ||||| ||| || ||| ||| | ||||| || || || || Sbjct 113467 AA-GATTCAAGACAAGGAAGGTATTCCTCCAGACCAACAACGTCTTATTTTTGCTGGTAA 113525 Query 206313 GCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 ||| || ||||||||| | ||| | | ||||| || | || ||||| ||||| || || Sbjct 113526 GCAATTAGAAGATGGACGTACTCTTTCTGATTATAATATTCAAAAAGAATCTACACTCCA 113585 Query 206373 CCTTGTTTTGAGACTTCG 206390 | || || | ||||| Sbjct 113586 TTTGGTCTTACGTCTTCG 113603 >seq304 Length=284809 Score = 87.8 bits (96), Expect = 4e-12 Identities = 145/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| |||||| || || || || || || || | || || ||| || ||| Sbjct 189724 CAAATCTTTGTCAAAACCCTTACGGGTAAGACCATTACCCTTGAGGTTGAATCCTCCGAC 189665 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | ||| || ||||| || ||| ||||| || ||||| || || ||| || Sbjct 189664 ACTATTGAAAATGTCAAAGCTAA-GATCCAAGATAAGGAAGGTATCCCACCAGACCAACA 189606 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 | | |||||||||||||| ||||| || |||||||| | ||| | | || |||||| | Sbjct 189605 ACGTCTTATCTTCGCCGGTAAGCAATTAGAAGATGGTCGTACTCTTTCTGACTACAACAT 189546 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGT 206378 || || || |||||| | || ||||| Sbjct 189545 TCAAAAGGAATCTACTTTACATCTTGT 189519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181805127948235