Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq179 105 6e-18 seq748 95.1 1e-14 seq172 89.7 5e-13 >seq179 Length=111796 Score = 105 bits (116), Expect = 6e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||| || || | ||| | ||| | | || ||||||||||||||||| || | || Sbjct 96353 ACGTAAACGAAGAACAAGATGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGT 96412 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 ||| |||||| | |||||||||| | |||||| ||| ||||||||||| || || || Sbjct 96413 ACGACCATCTTCTAATTGTTTACCGGCAAAGATTAAACGTTGTTGATCTGGTGGAATACC 96472 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 ||| ||||| ||| || ||| | | ||| | ||| || | | || ||||| | Sbjct 96473 TTCCTTATCTTGAATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGATTCAACTTCTAA 96532 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCT 132119 || | || |||||||| |||||||| | ||||||| Sbjct 96533 GGTAATGGTCTTACCAGTGAGAGTTTTAACAAAAATCT 96570 >seq748 Length=202608 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 || ||||| || || | | || ||||||||||||||||| || | ||||| | Sbjct 91413 CGTAAAACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCA 91354 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| | |||||||| | | | || ||||| ||||| ||||| || || ||||||||| Sbjct 91353 TCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTA 91294 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||| || ||| | | ||| | ||||| | | || ||||| | || | Sbjct 91293 TCTTGAATCTTAGCTTTGACATTTTCAATGGTATCAGAAGATTCTACTTCTAAAGTAATA 91234 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||||||||| | ||| || | ||||| ||||| Sbjct 91233 GTTTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 91199 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 || ||||| || || | | || ||||||||||||||||| || | ||||| | Sbjct 91641 CGTAAAACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCA 91582 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| | |||||||| | | | || ||||| ||||| ||||| || || ||||||||| Sbjct 91581 TCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTA 91522 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||| || ||| | | ||| | |||||| | | || ||||| | || | Sbjct 91521 TCTTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTGATA 91462 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || |||||||| | ||| || | ||||| ||||| Sbjct 91461 GTCTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 91427 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || ||||||||||||||||| || | ||||| |||||| | |||||||| | | Sbjct 91164 GATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCTAATTGTTTACCAGCA 91105 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | || ||||| ||||| ||||| || || ||||| ||||| ||| || ||| | Sbjct 91104 AAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATCTTGAATCTTAGCTTTGACA 91045 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | |||||| | | || ||||| | || | ||||||||||| | ||| || Sbjct 91044 TTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTGATAGTTTTACCAGTTAAAGTCTTA 90985 Query 132110 ATGAAAATCTGCAT 132123 | ||||| ||||| Sbjct 90984 ACAAAAATTTGCAT 90971 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || ||||||||||||||||| || | ||||| |||||| | |||||||| | | Sbjct 91848 GATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCTAATTGTTTACCAGCA 91789 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | || ||||| ||||| ||||| || || ||||||||||| ||| || ||| | Sbjct 91788 AAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATCTTGAATCTTAGCTTTGACA 91729 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | ||||| | | || ||||| | || | ||||||||||| | ||| || Sbjct 91728 TTTTCAATGGTATCAGAAGATTCTACTTCTAAAGTAATAGTTTTACCAGTTAAAGTCTTA 91669 Query 132110 ATGAAAATCTGCAT 132123 | ||||| ||||| Sbjct 91668 ACAAAAATTTGCAT 91655 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || ||||||||||||||||| || | ||||| |||||| | |||||||| | | Sbjct 92304 GATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCTAATTGTTTACCAGCA 92245 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | || ||||| ||||| ||||| || || ||||| ||||| ||| || ||| | Sbjct 92244 AAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATCTTGAATCTTAGCTTTAACA 92185 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | |||||| | | || ||||| | || | ||||||||||| | ||| || Sbjct 92184 TTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTAATAGTTTTACCAGTTAAAGTCTTA 92125 Query 132110 ATGAAAATCTGCAT 132123 | ||||| ||||| Sbjct 92124 ACAAAAATTTGCAT 92111 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/215 (70%), Gaps = 1/215 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 || ||||| || || | | || ||||||||||||||||| || | ||||| | Sbjct 92552 CGTAAAACTAAGTGGAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCA 92493 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| | |||||||| | | | || ||||| ||||| ||||| || || ||||| ||| Sbjct 92492 TCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTC-TTA 92434 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||| || ||| | | ||| | |||||| | | || ||||| | || | Sbjct 92433 TCTTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTAATA 92374 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||||||||| | ||| || | ||||| ||||| Sbjct 92373 GTTTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 92339 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || ||||||||||||||||| || | ||||| |||||| | |||||||| | | Sbjct 92076 GATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCTAATTGTTTACCAGCA 92017 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | || ||||| ||||| ||||| || || ||||| ||||| ||| || ||| | Sbjct 92016 AAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATCTTGAATCTTAGCTTTAACA 91957 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | |||||| | | || ||||| | || | || |||||||| | ||| || Sbjct 91956 TTTTCAATAGTATCAGAAGATTCTACTTCTAAAGTGATAGTCTTACCAGTTAAAGTCTTA 91897 Query 132110 ATGAAAATCTGCAT 132123 | ||||| ||||| Sbjct 91896 ACAAAAATTTGCAT 91883 >seq172 Length=114120 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || ||||||||||| || || || | ||||| |||||| | || ||||| | | Sbjct 114032 GATTCTTTTTGAATATTATAATCAGAAAGAGTACGTCCATCTTCTAATTGCTTACCAGCA 113973 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | || ||||| |||||||||||||| || ||||| ||||| |||||| ||| | Sbjct 113972 AAAATAAGACGTTGTTGATCTGGAGGAATACCTTCCTTATCTTGAATTTTAGCTTTGACA 113913 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | ||| || | | || ||||| | || | || |||||||||| || ||| Sbjct 113912 TTTTCAATAGTGTCAGAAGATTCTACTTCTAAGGTGATAGTCTTACCAGTCAAGGTCTTT 113853 Query 132110 ATGAAAATCTGCAT 132123 | ||| || ||||| Sbjct 113852 ACGAAGATTTGCAT 113839 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 || || |||||||| | | || ||||||||||| || || || | ||||| | Sbjct 113141 CGTAAGACCAAATGGAGTGTAGATTCTTTTTGAATATTATAATCAGAAAGAGTACGTCCA 113082 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| | || ||||| | | | || ||||| ||||| |||||||| || ||||| || Sbjct 113081 TCTTCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGGTCTGGAGGAATACCTTCCTTG 113022 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||| || ||| | | ||| | ||| || | | || ||||| | || | Sbjct 113021 TCTTGAATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGATTCTACTTCTAAGGTGATA 112962 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || |||||||||| || |||| ||| || ||||| Sbjct 112961 GTCTTACCAGTCAAGGTCTTTACGAAGATTTGCAT 112927 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 || || |||||||| | | || ||||||||||| || || || | ||||| | Sbjct 113597 CGTAAGACCAAATGGAGTGTAGATTCTTTTTGAATATTATAATCAGAAAGAGTACGTCCA 113538 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| | || ||||| | | | || ||||| ||||| |||||||| || ||||| || Sbjct 113537 TCTTCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGGTCTGGAGGAATACCTTCCTTG 113478 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||| || ||| | | ||| | ||| || | | || ||||| | || | Sbjct 113477 TCTTGAATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGATTCTACTTCTAAGGTGATA 113418 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || |||||||||| || |||| ||| || ||||| Sbjct 113417 GTCTTACCAGTCAAGGTCTTTACGAAGATTTGCAT 113383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476605033842600