Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq748 107 2e-18 seq172 98.7 8e-16 seq179 95.1 1e-14 >seq748 Length=202608 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||||||||||||||| || || ||||| || || ||||| | ||| |||| | Sbjct 91199 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATTACTTTAGAAGTAGAATCTTCT 91258 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| | ||| | || ||| || ||| || |||||||| | || || ||| Sbjct 91259 GATACCATTGAAAATGTCAAAGCTAAGATTCAAGATAAAGAAGGTATTCCACCAGACCAA 91318 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | ||||||| ||| || ||||||||||||||| ||| | ||||||||| Sbjct 91319 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAAC 91378 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATT 106471 || |||||||||||||| || || ||||| || Sbjct 91379 ATTCAAAAAGAATCTACTCTTCACTTAGTTTT 91410 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||||||||||||||| || || ||||| ||||| || || | ||| ||| | Sbjct 91427 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAGACTATCACTTTAGAAGTTGAATCTTCT 91486 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || ||| | || ||| || ||| || |||||||| | || || ||| Sbjct 91487 GATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAAAGAAGGTATTCCACCAGACCAA 91546 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | ||||||| ||| || ||||||||||||||| ||| | ||||||||| Sbjct 91547 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAAC 91606 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATT 106471 || |||||||||||||| || || ||||| || Sbjct 91607 ATTCAAAAAGAATCTACTCTTCACTTAGTTTT 91638 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||||||||||||||| || || ||||| || || ||||| | ||| |||| | Sbjct 91655 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATTACTTTAGAAGTAGAATCTTCT 91714 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| | ||| | || ||| || ||| || |||||||| | || || ||| Sbjct 91715 GATACCATTGAAAATGTCAAAGCTAAGATTCAAGATAAAGAAGGTATTCCACCAGACCAA 91774 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | ||||||| ||| || ||||||||||||||| ||| | ||||||||| Sbjct 91775 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAAC 91834 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATT 106471 || |||||||||||||| || || ||||| || Sbjct 91835 ATTCAAAAAGAATCTACTCTTCACTTAGTCTT 91866 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||||||||||||||| || || ||||| ||||| || || | ||| |||| | Sbjct 91883 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAGACTATCACTTTAGAAGTAGAATCTTCT 91942 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || ||| | || ||| || ||| || || ||||| | || || ||| Sbjct 91943 GATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGACCAA 92002 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | ||||||| ||| || ||||||||||||||| ||| | ||||||||| Sbjct 92003 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAAC 92062 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATT 106471 || |||||||||||||| || || ||||| || Sbjct 92063 ATTCAAAAAGAATCTACTCTTCACTTAGTCTT 92094 Score = 104 bits (114), Expect = 2e-17 Identities = 153/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 106255 TAAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAAC 106314 |||| ||||||||||||||||| || || ||||| || || || || | ||| ||| Sbjct 90966 TAAAGATGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATCACTTTAGAAGTTGAAT 91025 Query 106315 CCGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTG 106374 | ||| || ||| | || ||| || ||| || || ||||| | || | Sbjct 91026 CTTCTGATACTATTGAAAATGTCAAAGCTAAGATTCAAGATAAGGAAGGTATTCCACCAG 91085 Query 106375 ATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATT 106434 | |||||| | ||||||| ||| || ||||||||||||||| ||| | |||| Sbjct 91086 ACCAACAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATT 91145 Query 106435 ACAACATACAAAAAGAATCTACACTACATTTAGTATT 106471 ||||||| |||||||||||||| || || ||||| || Sbjct 91146 ACAACATTCAAAAAGAATCTACTCTTCACTTAGTCTT 91182 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||||||||||||||| || || ||||| || || ||||| | ||| ||| | Sbjct 92111 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATTACTTTAGAAGTTGAATCTTCT 92170 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || ||| | || ||| || ||| || || ||||| | || || ||| Sbjct 92171 GATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGACCAA 92230 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | ||||||| ||| || ||||||||||||||| ||| | ||||||||| Sbjct 92231 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAAC 92290 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATT 106471 || |||||||||||||| || || ||||| || Sbjct 92291 ATTCAAAAAGAATCTACTCTCCACTTAGTCTT 92322 Score = 100 bits (110), Expect = 2e-16 Identities = 150/212 (71%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||||||||||||||| || || ||||| || || ||||| | ||| ||| | Sbjct 92339 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATTACTTTAGAAGTTGAATCTTCT 92398 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || ||| | || ||| || ||| || || ||||| | || || ||| Sbjct 92399 GATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAA-GAAGGTATTCCACCAGACCAA 92457 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | ||||||| ||| || ||||||||||||||| ||| | ||||||||| Sbjct 92458 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAAC 92517 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATT 106471 || |||||||||||||| || || ||||| || Sbjct 92518 ATTCAAAAAGAATCTACTCTCCACTTAGTTTT 92549 >seq172 Length=114120 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| || || || || |||||||| ||||| || ||| | ||| |||| | Sbjct 113839 ATGCAAATCTTCGTAAAGACCTTGACTGGTAAGACTATCACCTTAGAAGTAGAATCTTCT 113898 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || || ||| | || ||| |||||| || || ||||| | || |||||| Sbjct 113899 GACACTATTGAAAATGTCAAAGCTAAAATTCAAGATAAGGAAGGTATTCCTCCAGATCAA 113958 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | ||||||| ||| || || |||||||||||| ||| | ||||| || Sbjct 113959 CAACGTCTTATTTTTGCTGGTAAGCAATTAGAAGATGGACGTACTCTTTCTGATTATAAT 114018 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATT 106471 || ||||||||||||||||| || ||||| || Sbjct 114019 ATTCAAAAAGAATCTACACTCCACTTAGTCTT 114050 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 106256 AAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACC 106315 |||||||||||| || || || || || ||||| ||||| || ||| | ||| |||| | Sbjct 112695 AAAAATGCAAATCTTCGTAAAGACTTTAACTGGTAAGACTATCACCTTAGAAGTAGAATC 112754 Query 106316 CGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGA 106375 || || ||| | || ||| || ||| ||||| ||||| | || || Sbjct 112755 TTCTGACACTATTGAAAATGTCAAAGCTAAGATTCAAGACAAGGAAGGAATTCCTCCAGA 112814 Query 106376 TCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTA 106435 |||||| | ||||||| ||| || || |||||||||||| ||| | ||||| Sbjct 112815 CCAACAACGTCTTATTTTTGCTGGTAAGCAATTAGAAGATGGACGTACTCTTTCTGATTA 112874 Query 106436 CAACATACAAAAAGAATCTACACTACATTTAGTATT 106471 || || ||||||||||||||||| || ||||| || Sbjct 112875 TAATATTCAAAAAGAATCTACACTCCACTTAGTCTT 112910 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| || || || || |||||||| ||||| || ||| | ||| |||| | Sbjct 112927 ATGCAAATCTTCGTAAAGACCTTGACTGGTAAGACTATCACCTTAGAAGTAGAATCTTCT 112986 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || || ||| | || ||| || ||| ||||| ||||| | || || ||| Sbjct 112987 GACACTATTGAAAATGTCAAAGCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 113046 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | ||||||| ||| || || |||||||||||| ||| | ||||| || Sbjct 113047 CAACGTCTTATTTTTGCTGGTAAGCAATTAGAAGATGGACGTACTCTTTCTGATTATAAT 113106 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATT 106471 || ||||||||||||||||| ||||| || || Sbjct 113107 ATTCAAAAAGAATCTACACTCCATTTGGTCTT 113138 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| || || || || |||||||| ||||| || ||| | ||| |||| | Sbjct 113383 ATGCAAATCTTCGTAAAGACCTTGACTGGTAAGACTATCACCTTAGAAGTAGAATCTTCT 113442 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || || ||| | || ||| || ||| ||||| ||||| | || || ||| Sbjct 113443 GACACTATTGAAAATGTCAAAGCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 113502 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | ||||||| ||| || || |||||||||||| ||| | ||||| || Sbjct 113503 CAACGTCTTATTTTTGCTGGTAAGCAATTAGAAGATGGACGTACTCTTTCTGATTATAAT 113562 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATT 106471 || ||||||||||||||||| ||||| || || Sbjct 113563 ATTCAAAAAGAATCTACACTCCATTTGGTCTT 113594 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| || || || || |||||||| ||||| || ||| | ||| |||| | Sbjct 113155 ATGCAAATCTTCGTAAAGACTTTGACTGGTAAGACTATCACCTTAGAAGTAGAATCTTCT 113214 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || || ||| | || ||| || ||| || || ||||| | || || ||| Sbjct 113215 GACACTATTGAAAACGTTAAAGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGACCAA 113274 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | ||||||| ||| || || |||||||||||| ||| | ||||| || Sbjct 113275 CAACGTCTTATTTTTGCTGGTAAGCAATTAGAAGATGGACGTACTCTTTCTGATTATAAT 113334 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATT 106471 || ||||||||||||||||| || ||||| || Sbjct 113335 ATTCAAAAAGAATCTACACTCCACTTAGTCTT 113366 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| || || || || |||||||| ||||| || ||| | ||| |||| | Sbjct 113611 ATGCAAATCTTCGTAAAGACTTTGACTGGTAAGACTATCACCTTAGAAGTAGAATCTTCT 113670 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || || ||| | || ||| || ||| || || ||||| | || || ||| Sbjct 113671 GACACTATTGAAAACGTTAAAGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGACCAA 113730 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | ||||||| ||| || || |||||||||||| ||| | ||||| || Sbjct 113731 CAACGTCTTATTTTTGCTGGTAAGCAATTAGAAGATGGACGTACTCTTTCTGATTATAAT 113790 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATT 106471 || ||||||||||||||||| || ||||| || Sbjct 113791 ATTCAAAAAGAATCTACACTCCACTTAGTCTT 113822 >seq179 Length=111796 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/232 (69%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 106256 AAAAATGCAA-ATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAAC 106314 |||||| || |||||||||||||| | ||||| |||||||||||| | ||| ||| Sbjct 96579 AAAAATAAAAGATTTTTGTTAAAACTCTCACTGGTAAGACCATTACCTTAGAAGTTGAAT 96520 Query 106315 CCGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTG 106374 | || || ||| | || ||| || ||| || || ||||| | || | Sbjct 96519 CTTCTGACACTATTGAAAATGTCAAAGCTAAGATTCAAGATAAGGAAGGTATTCCACCAG 96460 Query 106375 ATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATT 106434 |||||||| | | || | ||| || ||||||||||||||| | ||| | |||| Sbjct 96459 ATCAACAACGTTTAATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATT 96400 Query 106435 ACAACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 ||||||| |||||||||||||| || ||| | || | | ||||| || || Sbjct 96399 ACAACATTCAAAAAGAATCTACTCTTCATCTTGTTCTTCGTTTACGTGGTGG 96348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402324524989280