Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq748 127 2e-24 seq179 122 9e-23 seq304 107 2e-18 seq172 104 2e-17 seq53 84.2 2e-11 >seq748 Length=202608 Score = 127 bits (140), Expect = 2e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || || || | ||| || || ||||| |||||||||||||| || || || | Sbjct 91416 AGACGTAAAACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGT 91357 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || | ||||| || |||||||| | ||| || || || || || || |||||| Sbjct 91356 CCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCT 91297 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || |||||||| || |||||| || | || || || ||||| || || | |||| Sbjct 91296 TTATCTTGAATCTTAGCTTTGACATTTTCAATGGTATCAGAAGATTCTACTTCTAAAGTA 91237 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || |||||||| |||||||| ||||| ||||||||||| Sbjct 91236 ATAGTTTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 91199 Score = 127 bits (140), Expect = 2e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || || || | ||| || || ||||| |||||||||||||| || || || | Sbjct 91872 AGACGTAAGACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGT 91813 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || | ||||| || |||||||| | ||| || || || || || || |||||| Sbjct 91812 CCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCT 91753 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || |||||||| || |||||| || | || || || ||||| || || | |||| Sbjct 91752 TTATCTTGAATCTTAGCTTTGACATTTTCAATGGTATCAGAAGATTCTACTTCTAAAGTA 91693 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || |||||||| |||||||| ||||| ||||||||||| Sbjct 91692 ATAGTTTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 91655 Score = 120 bits (132), Expect = 3e-22 Identities = 159/221 (72%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || || || | ||| || || ||||| |||||||||||||| || || || | Sbjct 91188 AGACGTAAGACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGT 91129 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || | ||||| || |||||||| | ||| || || || || || || ||||| Sbjct 91128 CCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCC 91069 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || |||||||| || |||||| || | || || || ||||| || || | ||| Sbjct 91068 TTATCTTGAATCTTAGCTTTGACATTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTG 91009 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 || |||||||| |||||||| ||||| ||||||||||| || Sbjct 91008 ATAGTTTTACCAGTTAAAGTCTTAACAAAAATTTGCATCTT 90968 Score = 118 bits (130), Expect = 1e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || || || | ||| || || ||||| |||||||||||||| || || || | Sbjct 92328 AGACGTAAGACTAAGTGGAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGT 92269 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || | ||||| || |||||||| | ||| || || || || || || ||||| Sbjct 92268 CCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCC 92209 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || |||||||| || ||| || || | || || || ||||| || || | |||| Sbjct 92208 TTATCTTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTA 92149 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || |||||||| |||||||| ||||| ||||||||||| Sbjct 92148 ATAGTTTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 92111 Score = 118 bits (130), Expect = 1e-21 Identities = 165/230 (72%), Gaps = 1/230 (0%) Strand=Plus/Minus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543 ||||| || | || || || || | ||| || || ||||| |||||||||||||| || Sbjct 92567 TTTCCACCACGAAGACGTAAAACTAAGTGGAGAGTAGATTCTTTTTGAATGTTGTAATCA 92508 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 || || | || || | ||||| || |||||||| | ||| || || || || Sbjct 92507 GAAAGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGT 92448 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || || ||||||| | ||||||| || ||| || || | || || || ||||| Sbjct 92447 GGAATACCTTCTTAT-CTTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCA 92389 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | |||||| |||||||| |||||||| ||||| ||||||||||| Sbjct 92388 ACTTCTAAAGTAATAGTTTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 92339 Score = 114 bits (126), Expect = 1e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || || || | ||| || || ||||| |||||||||||||| || || || | Sbjct 91644 AGACGTAAAACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGT 91585 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || | ||||| || |||||||| | ||| || || || || || || |||||| Sbjct 91584 CCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCT 91525 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || |||||||| || ||| || || | || || || ||||| || || | ||| Sbjct 91524 TTATCTTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTG 91465 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || ||||| |||||||| ||||| ||||||||||| Sbjct 91464 ATAGTCTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 91427 Score = 109 bits (120), Expect = 6e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || || || | ||| || || ||||| |||||||||||||| || || || | Sbjct 92100 AGACGTAAGACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGT 92041 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || | ||||| || |||||||| | ||| || || || || || || ||||| Sbjct 92040 CCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCC 91981 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || |||||||| || ||| || || | || || || ||||| || || | ||| Sbjct 91980 TTATCTTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCTACTTCTAAAGTG 91921 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || ||||| |||||||| ||||| ||||||||||| Sbjct 91920 ATAGTCTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 91883 >seq179 Length=111796 Score = 122 bits (134), Expect = 9e-23 Identities = 159/219 (73%), Gaps = 1/219 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || || || || || ||||| |||||||||||||| || || || || || || Sbjct 96366 ACAAGATGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGACCATCTTCT 96425 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 | ||||| || ||||| || ||||| || ||||| || || || ||||| || |||||| Sbjct 96426 AATTGTTTACCGGCAAAGATTAAACGTTGTTGATCTGGTGGAATACCTTCCTTATCTTGA 96485 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || |||||| || | ||||| || ||||| || || | |||||||| ||| Sbjct 96486 ATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATGGTCTTA 96545 Query 134685 CCGGTTAAAGTTTTAACGAAAAT-TTGCATTTTGTTTTT 134722 || || | ||||||||| ||||| || ||||| ||||| Sbjct 96546 CCAGTGAGAGTTTTAACAAAAATCTTTTATTTTTTTTTT 96584 >seq304 Length=284809 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || || |||| || ||||||||||||||||||||||| || || || || || Sbjct 189519 ACAAGATGTAAAGTAGATTCCTTTTGAATGTTGTAGTCAGAAAGAGTACGACCATCTTCT 189578 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 | || || || || || || | ||| || || || || || || ||||| || ||||| Sbjct 189579 AATTGCTTACCGGCGAAGATAAGACGTTGTTGGTCTGGTGGGATACCTTCCTTATCTTGG 189638 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || |||||| || | |||||||| ||||| || || || |||||||| ||| Sbjct 189639 ATCTTAGCTTTGACATTTTCAATAGTGTCGGAGGATTCAACCTCAAGGGTAATGGTCTTA 189698 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | ||||| || || |||||||| Sbjct 189699 CCCGTAAGGGTTTTGACAAAGATTTGCAT 189727 >seq172 Length=114120 Score = 104 bits (114), Expect = 2e-17 Identities = 158/225 (70%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || || || | ||| || || ||||| |||||||| || || || || || | Sbjct 112916 AGACGTAAGACTAAGTGGAGTGTAGATTCTTTTTGAATATTATAATCAGAAAGAGTACGT 112857 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || | || || || |||||||| | ||| || || || || || || ||||| Sbjct 112856 CCATCTTCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGGTCTGGAGGAATTCCTTCC 112797 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || |||||||| || |||||| || | ||||| || ||||| || || | || Sbjct 112796 TTGTCTTGAATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGATTCTACTTCTAAGGTG 112737 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGTTT 134720 || || ||||| |||||||| || ||||| ||||||||||| ||| Sbjct 112736 ATAGTCTTACCAGTTAAAGTCTTTACGAAGATTTGCATTTTTTTT 112692 Score = 96.9 bits (106), Expect = 4e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || || || | ||| || || ||||| |||||||| || || || || || | Sbjct 114056 AGACGTAAGACTAAGTGGAGTGTAGATTCTTTTTGAATATTATAATCAGAAAGAGTACGT 113997 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || | || || || |||||||| | ||| || ||||| || || || ||||| Sbjct 113996 CCATCTTCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGATCTGGAGGAATACCTTCC 113937 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || ||||||||||| |||||| || | ||||| || ||||| || || | || Sbjct 113936 TTATCTTGAATTTTAGCTTTGACATTTTCAATAGTGTCAGAAGATTCTACTTCTAAGGTG 113877 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || ||||| || || || || ||||| |||||||| Sbjct 113876 ATAGTCTTACCAGTCAAGGTCTTTACGAAGATTTGCAT 113839 >seq53 Length=166033 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/188 (71%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583 ||||||| ||||||||||| || || | || || | || || || || |||| Sbjct 113403 CCTTTTGGATGTTGTAGTCAGAAAGAGTACGGTCATCTTCTAATTGCTTACCAGCGAAAA 113344 Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643 | ||||| || ||||| || || || ||||| |||||||| || ||||| || | | Sbjct 113343 TTAAACGTTGTTGATCTGGTGGAATACCTTCCTTTTCTTGGATCTTTTGCTT-AACATTA 113285 Query 134644 CCAATG-TGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACG 134702 ||||| ||||||| ||||| || || || || || || || ||||| | || || || Sbjct 113284 ACAATGCTGTCGGAAGATTCAACCTCAAGGGTTATAGTCTTTCCGGTAAGGGTCTTTACA 113225 Query 134703 AAAATTTG 134710 ||||| || Sbjct 113224 AAAATCTG 113217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505391861408200