Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq304 116 3e-21 seq748 102 7e-17 seq172 96.9 3e-15 seq179 87.8 2e-12 >seq304 Length=284809 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || || || || | || | |||||| ||||| || |||||||| |||||||| Sbjct 189501 CCACCACGTAAACGAAGGACAAGATGTAAAGTAGATTCCTTTTGAATGTTGTAGTCAGAA 189560 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | || | ||||| | || ||||||||| | || ||||| ||||| || || || Sbjct 189561 AGAGTACGACCATCTTCTAATTGCTTACCGGCGAAGATAAGACGTTGTTGGTCTGGTGGG 189620 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||| || ||||| |||||| ||| | |||| | |||||| | || |||||| Sbjct 189621 ATACCTTCCTTATCTTGGATCTTAGCTTTGACATTTTCAATAGTGTCGGAGGATTCAACC 189680 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | || ||||| || ||||| |||||||||||||| Sbjct 189681 TCAAGGGTAATGGTCTTACCCGTAAGGGTTTTGACAAAGATTTGCAT 189727 >seq748 Length=202608 Score = 102 bits (112), Expect = 7e-17 Identities = 163/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 || || || || || | ||||| ||||||||||| ||||| || | | || | Sbjct 91185 CGTAAGACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCA 91126 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| | |||||||| || |||| ||||| ||||| || || || | ||| || ||| Sbjct 91125 TCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTA 91066 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||| ||| | |||| | ||| || | | ||||||||||| ||| ||| Sbjct 91065 TCTTGAATCTTAGCTTTGACATTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTGATA 91006 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCTAAAAATTTATTA 27266 | ||| || || | ||| || ||||| |||||||| | ||| |||||||| Sbjct 91005 GTTTTACCAGTTAAAGTCTTAACAAAAATTTGCATCTTTACTATTTATTTATTA 90952 Score = 102 bits (112), Expect = 7e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 || || || || || | ||||| ||||||||||| ||||| || | | || | Sbjct 91641 CGTAAAACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCA 91582 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| | |||||||| || |||| ||||| ||||| || || || | ||| |||||| Sbjct 91581 TCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTA 91522 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||| ||| | |||| | ||| || | | ||||||||||| ||| ||| Sbjct 91521 TCTTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTGATA 91462 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | || || || | ||| || ||||| ||||||||| Sbjct 91461 GTCTTACCAGTTAAAGTCTTAACAAAAATTTGCATA 91426 Score = 102 bits (112), Expect = 7e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 || || || || || | ||||| ||||||||||| ||||| || | | || | Sbjct 92325 CGTAAGACTAAGTGGAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCA 92266 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| | |||||||| || |||| ||||| ||||| || || || | ||| || ||| Sbjct 92265 TCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTA 92206 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||| ||| | |||| | ||| || | | ||||||||||| ||| ||| Sbjct 92205 TCTTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTAATA 92146 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | ||| || || | ||| || ||||| ||||||||| Sbjct 92145 GTTTTACCAGTTAAAGTCTTAACAAAAATTTGCATA 92110 Score = 100 bits (110), Expect = 2e-16 Identities = 162/232 (70%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 27017 ATTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC 27076 ||| || || || | || || || || || | ||||| ||||||||||| ||||| || Sbjct 92568 ATTTCCACCACGAAGACGTAAAACTAAGTGGAGAGTAGATTCTTTTTGAATGTTGTAATC 92509 Query 27077 GCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGG 27136 | | || | ||||| | |||||||| || |||| ||||| ||||| || || Sbjct 92508 AGAAAGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGG 92449 Query 27137 CGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTC 27196 || | ||| |||| ||| ||||| ||| | |||| | ||| || | | ||| Sbjct 92448 TGGAATACCTTCTT-ATCTTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTC 92390 Query 27197 AACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 |||||||| ||| |||| ||| || || | ||| || ||||| ||||||||| Sbjct 92389 AACTTCTAAAGTAATAGTTTTACCAGTTAAAGTCTTAACAAAAATTTGCATA 92338 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 || || || || || | ||||| ||||||||||| ||||| || | | || | Sbjct 91413 CGTAAAACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCA 91354 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| | |||||||| || |||| ||||| ||||| || || || | ||| |||||| Sbjct 91353 TCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTA 91294 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||| ||| | |||| | || || | | ||| ||||||| ||| ||| Sbjct 91293 TCTTGAATCTTAGCTTTGACATTTTCAATGGTATCAGAAGATTCTACTTCTAAAGTAATA 91234 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | ||| || || | ||| || ||||| ||||||||| Sbjct 91233 GTTTTACCAGTTAAAGTCTTAACAAAAATTTGCATA 91198 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 || || || || || | ||||| ||||||||||| ||||| || | | || | Sbjct 91869 CGTAAGACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCA 91810 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| | |||||||| || |||| ||||| ||||| || || || | ||| |||||| Sbjct 91809 TCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTA 91750 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||| ||| | |||| | || || | | ||| ||||||| ||| ||| Sbjct 91749 TCTTGAATCTTAGCTTTGACATTTTCAATGGTATCAGAAGATTCTACTTCTAAAGTAATA 91690 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | ||| || || | ||| || ||||| ||||||||| Sbjct 91689 GTTTTACCAGTTAAAGTCTTAACAAAAATTTGCATA 91654 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 || || || || || | ||||| ||||||||||| ||||| || | | || | Sbjct 92097 CGTAAGACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCA 92038 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| | |||||||| || |||| ||||| ||||| || || || | ||| || ||| Sbjct 92037 TCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTA 91978 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||| ||| | |||| | ||| || | | ||| ||||||| ||| ||| Sbjct 91977 TCTTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCTACTTCTAAAGTGATA 91918 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | || || || | ||| || ||||| ||||||||| Sbjct 91917 GTCTTACCAGTTAAAGTCTTAACAAAAATTTGCATA 91882 >seq172 Length=114120 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 || || || || || | ||||| |||||||||||||| || || | | || | Sbjct 113369 CGTAAGACTAAGTGGAGTGTAGATTCTTTTTGAATATTATAATCAGAAAGAGTACGTCCA 113310 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| | || ||||| || |||| ||||| ||||| || || || | ||| || ||| Sbjct 113309 TCTTCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTA 113250 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||| ||| | | |||| | |||||| | | ||| ||||||| || ||| Sbjct 113249 TCTTGAATCTTAGCTTTAACGTTTTCAATAGTGTCAGAAGATTCTACTTCTAAGGTGATA 113190 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | || || |||| ||| || || |||||||||||| Sbjct 113189 GTCTTACCAGTCAAAGTCTTTACGAAGATTTGCATA 113154 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 || || || || || | ||||| |||||||||||||| || || | | || | Sbjct 113825 CGTAAGACTAAGTGGAGTGTAGATTCTTTTTGAATATTATAATCAGAAAGAGTACGTCCA 113766 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| | || ||||| || |||| ||||| ||||| || || || | ||| || ||| Sbjct 113765 TCTTCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTA 113706 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||| ||| | | |||| | |||||| | | ||| ||||||| || ||| Sbjct 113705 TCTTGAATCTTAGCTTTAACGTTTTCAATAGTGTCAGAAGATTCTACTTCTAAGGTGATA 113646 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | || || |||| ||| || || |||||||||||| Sbjct 113645 GTCTTACCAGTCAAAGTCTTTACGAAGATTTGCATA 113610 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 || || |||||||| | ||||| |||||||||||||| || || | | || | Sbjct 113141 CGTAAGACCAAATGGAGTGTAGATTCTTTTTGAATATTATAATCAGAAAGAGTACGTCCA 113082 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| | || ||||| || |||| ||||| ||||| || || || | ||| || || Sbjct 113081 TCTTCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGGTCTGGAGGAATACCTTCCTTG 113022 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||| ||| | |||| | |||||| | | ||| ||||||| || ||| Sbjct 113021 TCTTGAATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGATTCTACTTCTAAGGTGATA 112962 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | || || |||| || || || |||||||||||| Sbjct 112961 GTCTTACCAGTCAAGGTCTTTACGAAGATTTGCATA 112926 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 || || |||||||| | ||||| |||||||||||||| || || | | || | Sbjct 113597 CGTAAGACCAAATGGAGTGTAGATTCTTTTTGAATATTATAATCAGAAAGAGTACGTCCA 113538 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| | || ||||| || |||| ||||| ||||| || || || | ||| || || Sbjct 113537 TCTTCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGGTCTGGAGGAATACCTTCCTTG 113478 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||| ||| | |||| | |||||| | | ||| ||||||| || ||| Sbjct 113477 TCTTGAATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGATTCTACTTCTAAGGTGATA 113418 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | || || |||| || || || |||||||||||| Sbjct 113417 GTCTTACCAGTCAAGGTCTTTACGAAGATTTGCATA 113382 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 || || || || || | ||||| |||||||||||||| || || | | || | Sbjct 114053 CGTAAGACTAAGTGGAGTGTAGATTCTTTTTGAATATTATAATCAGAAAGAGTACGTCCA 113994 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| | || ||||| || |||| ||||| |||||||| || || | ||| || ||| Sbjct 113993 TCTTCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGATCTGGAGGAATACCTTCCTTA 113934 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || || || ||| | |||| | |||||| | | ||| ||||||| || ||| Sbjct 113933 TCTTGAATTTTAGCTTTGACATTTTCAATAGTGTCAGAAGATTCTACTTCTAAGGTGATA 113874 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | || || |||| || || || |||||||||||| Sbjct 113873 GTCTTACCAGTCAAGGTCTTTACGAAGATTTGCATA 113838 >seq179 Length=111796 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| ||||||||||| ||||| || | | || | ||||| | ||||||||| Sbjct 96378 GTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGACCATCTTCTAATTGTTTACCG 96437 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | || | ||| |||||||| || || | ||| || ||||| ||||| ||| Sbjct 96438 GCAAAGATTAAACGTTGTTGATCTGGTGGAATACCTTCCTTATCTTGAATCTTAGCTTTG 96497 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | |||| | |||||| | | ||||||||||| || || | || || || |||||| Sbjct 96498 ACATTTTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATGGTCTTACCAGTGAGAGTT 96557 Query 27231 TTCACAAAGAT 27241 || ||||| || Sbjct 96558 TTAACAAAAAT 96568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424929039850920