Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq284 95.1 2e-14 >seq284 Length=82653 Score = 95.1 bits (104), Expect = 2e-14 Identities = 237/349 (68%), Gaps = 12/349 (3%) Strand=Plus/Minus Query 182519 ACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCATAATCATAAGACGACCATAGCG 182578 ||| || |||||||||||||| |||| ||| | ||||||||||| | | ||||| | Sbjct 2800 ACCTTTAATGTGAGAACCATCCGTATCTTGATCAGCCATAATCATAATATGTCCATATCT 2741 Query 182579 --AAGT-TCAGAAACATCTTGGTAGTCTTTTCCTTGTTGAAGACCAAGGATCTTCTTGAG 182635 || | || | | | || || |||| || ||||| | |||||| || | ||| | Sbjct 2740 TAAACTATCTGTA---TTTTCATAAACTTTACCATGTTGTAAACCAAGAATTTGCTTAAT 2684 Query 182636 ATCATTGAACTCCTGGTTTGATGTA-AGCTGTGCCACC-GAAGCGTCCCGAACATTCTTA 182693 | || | | || ||| || || | | || | ||||| || ||||||||| | Sbjct 2683 AGCACTTA-CTTCTGCATT-ATCCATAATTGATTTATGTGAAGCATCACGAACATTCA-A 2627 Query 182694 CATTT-ACCGCGAAGTGGGAACACACCGTAGTGATCACGACCAACGACAGAGAGACCCGC 182752 ||||| ||| || | |||||| ||||| || | |||||||||||| |||| | ||| Sbjct 2626 CATTTTACCACGTAATGGGAAAACACCATAATTATCACGACCAACAACAGTTAAACCACT 2567 Query 182753 AACCGCGAGGGTTTTCGCCGAATCACCCTCCGTGACAATGAGAGTACACTTTCCAGATTG 182812 || || | | ||| || ||||| || || || | ||| | | ||| | | ||| || Sbjct 2566 AATAGCTAATGCTTTAGCAGAATCCCCTTCTGTTAAAATTAAAACACAATCTTTAGAATG 2507 Query 182813 TGCCGTACCCGCCTTGTTCGCGTCATCCAACTTGGGAATACCGGTAATT 182861 ||||| || || || || |||||||| || || ||||| | |||| Sbjct 2506 CTTTGTACCAGCATTATTAGCATCATCCAATTTTGGTATACCTGAAATT 2458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628023874836000