Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq748 116 2e-21 seq172 107 1e-18 seq179 104 1e-17 seq53 102 5e-17 seq233 96.9 2e-15 seq304 93.3 3e-14 >seq748 Length=202608 Score = 116 bits (128), Expect = 2e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| || || || |||||||| || ||||||||||| ||||| ||| Sbjct 92337 CCACCACGAAGACGTAAGACTAAGTGGAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 92278 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | ||||| | ||||||||| ||||| || | ||| |||||||| || || Sbjct 92277 AGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGA 92218 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCAC 34658 | || ||||| ||| ||| || | |||||| | ||| || || || || Sbjct 92217 ATACCTTCCTTATCT-TGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCAAC 92159 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| | || || |||||||| ||||| || || |||||||| ||||| Sbjct 92158 TTCTAAAGTAATAGTTTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 92111 Score = 113 bits (124), Expect = 3e-20 Identities = 164/228 (72%), Gaps = 3/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| || || || |||||||| || ||||||||||| ||||| ||| Sbjct 92564 CCACCACGAAGACGTAAAACTAAGTGGAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 92505 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | ||||| | ||||||||| ||||| || | ||| |||||||| || || Sbjct 92504 AGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGG- 92446 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCAC 34658 | | ||| ||| ||| ||| || | |||||| | ||| || || || || Sbjct 92445 AATACCTTCTTATCT-TGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCAAC 92387 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| | || || |||||||| ||||| || || |||||||| ||||| Sbjct 92386 TTCTAAAGTAATAGTTTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 92339 Score = 109 bits (120), Expect = 3e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| || || || || ||||| || ||||||||||| ||||| ||| Sbjct 91197 CCACCACGAAGACGTAAGACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 91138 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | ||||| | ||||||||| ||||| || | ||| |||||||| || || Sbjct 91137 AGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGA 91078 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACT 34659 | || ||||| ||| ||||| ||| | | ||| || || || ||| Sbjct 91077 ATACCTTCCTTATCTTGAATCTTAGCTTTGACATTTTCAATAGTATCAGAAGATTCAACT 91018 Query 34660 TCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709 || | || || |||||||| ||||| || || |||||||| ||||| || Sbjct 91017 TCTAAAGTGATAGTTTTACCAGTTAAAGTCTTAACAAAAATTTGCATCTT 90968 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| || || || || ||||| || ||||||||||| ||||| ||| Sbjct 92109 CCACCACGAAGACGTAAGACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 92050 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | ||||| | ||||||||| ||||| || | ||| |||||||| || || Sbjct 92049 AGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGA 91990 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCAC 34658 | || ||||| ||| ||| || | |||||| | ||| || || || || Sbjct 91989 ATACCTTCCTTATCT-TGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCTAC 91931 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| | || || || ||||| ||||| || || |||||||| ||||| Sbjct 91930 TTCTAAAGTGATAGTCTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 91883 Score = 104 bits (114), Expect = 1e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| || || || || ||||| || ||||||||||| ||||| ||| Sbjct 91425 CCACCACGAAGACGTAAAACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 91366 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | ||||| | ||||||||| ||||| || | ||| |||||||| || || Sbjct 91365 AGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGA 91306 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACT 34659 | || || || ||| ||||| ||| | | ||| || || || ||| Sbjct 91305 ATACCTTCTTTATCTTGAATCTTAGCTTTGACATTTTCAATGGTATCAGAAGATTCTACT 91246 Query 34660 TCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | || || |||||||| ||||| || || |||||||| ||||| Sbjct 91245 TCTAAAGTAATAGTTTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 91199 Score = 104 bits (114), Expect = 1e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| || || || || ||||| || ||||||||||| ||||| ||| Sbjct 91881 CCACCACGAAGACGTAAGACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 91822 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | ||||| | ||||||||| ||||| || | ||| |||||||| || || Sbjct 91821 AGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGA 91762 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACT 34659 | || || || ||| ||||| ||| | | ||| || || || ||| Sbjct 91761 ATACCTTCTTTATCTTGAATCTTAGCTTTGACATTTTCAATGGTATCAGAAGATTCTACT 91702 Query 34660 TCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | || || |||||||| ||||| || || |||||||| ||||| Sbjct 91701 TCTAAAGTAATAGTTTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 91655 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| || || || || ||||| || ||||||||||| ||||| ||| Sbjct 91653 CCACCACGAAGACGTAAAACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 91594 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | ||||| | ||||||||| ||||| || | ||| |||||||| || || Sbjct 91593 AGAGTACGTCCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGA 91534 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCAC 34658 | || || || ||| ||| || | |||||| | ||| || || || || Sbjct 91533 ATACCTTCTTTATCT-TGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCAAC 91475 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| | || || || ||||| ||||| || || |||||||| ||||| Sbjct 91474 TTCTAAAGTGATAGTCTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 91427 >seq172 Length=114120 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| || ||||||||||| || || |||||||| |||||||| ||| Sbjct 113153 CCACCACGAAGACGTAAGACCAAATGGAGTGTAGATTCTTTTTGAATATTATAATCAGAA 113094 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | ||||| | ||| ||||| ||||| || | ||| |||||||| || || Sbjct 113093 AGAGTACGTCCATCTTCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGGTCTGGAGGA 113034 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACT 34659 | || ||||||||| ||||| ||| | | ||| ||||| || ||| Sbjct 113033 ATACCTTCCTTGTCTTGAATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGATTCTACT 112974 Query 34660 TCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | ||| || || ||||| || || || || || || || ||||| Sbjct 112973 TCTAAGGTGATAGTCTTACCAGTCAAGGTCTTTACGAAGATTTGCAT 112927 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| || ||||||||||| || || |||||||| |||||||| ||| Sbjct 113609 CCACCACGAAGACGTAAGACCAAATGGAGTGTAGATTCTTTTTGAATATTATAATCAGAA 113550 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | ||||| | ||| ||||| ||||| || | ||| |||||||| || || Sbjct 113549 AGAGTACGTCCATCTTCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGGTCTGGAGGA 113490 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACT 34659 | || ||||||||| ||||| ||| | | ||| ||||| || ||| Sbjct 113489 ATACCTTCCTTGTCTTGAATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGATTCTACT 113430 Query 34660 TCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | ||| || || ||||| || || || || || || || ||||| Sbjct 113429 TCTAAGGTGATAGTCTTACCAGTCAAGGTCTTTACGAAGATTTGCAT 113383 >seq179 Length=111796 Score = 104 bits (114), Expect = 1e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 34503 ATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTG 34562 ||| ||||| || ||||||||||| ||||| ||||| || || | ||||| | ||| Sbjct 96371 ATGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGACCATCTTCTAATTG 96430 Query 34563 TTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622 |||||||||||| |||||||| ||||| || || || | || ||||| ||| ||||| Sbjct 96431 TTTACCGGCAAAGATTAAACGTTGTTGATCTGGTGGAATACCTTCCTTATCTTGAATCTT 96490 Query 34623 TTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 ||| | | ||| ||||| || ||||| | ||| || || ||||| || Sbjct 96491 AGCTTTGACATTTTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATGGTCTTACCAGT 96550 Query 34683 TAACGTTTTCACAAAAATCT 34702 | ||||| |||||||||| Sbjct 96551 GAGAGTTTTAACAAAAATCT 96570 >seq53 Length=166033 Score = 102 bits (112), Expect = 5e-17 Identities = 137/188 (73%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 34517 CCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATA 34576 ||||||| ||||| || || ||||| || || || ||||| | ||| ||||| || || | Sbjct 113403 CCTTTTGGATGTTGTAGTCAGAAAGAGTACGGTCATCTTCTAATTGCTTACCAGCGAAAA 113344 Query 34577 TTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA 34636 ||||||| ||||| || || || | || ||||| ||| ||||||||| || ||| || Sbjct 113343 TTAAACGTTGTTGATCTGGTGGAATACCTTCCTTTTCTTGGATCTTTTGCTT-AACATTA 113285 Query 34637 AAATTG-TGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACA 34695 | | || |||| || || || | |||||| || || ||||| | || || ||| Sbjct 113284 ACAATGCTGTCGGAAGATTCAACCTCAAGGGTTATAGTCTTTCCGGTAAGGGTCTTTACA 113225 Query 34696 AAAATCTG 34703 |||||||| Sbjct 113224 AAAATCTG 113217 >seq233 Length=93418 Score = 96.9 bits (106), Expect = 2e-15 Identities = 135/187 (72%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 34517 CCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATA 34576 ||||||||||||| || || ||||| |||| || ||||| | |||||||||||| || | Sbjct 51823 CCTTTTGAATGTTGTAGTCAGAAAGGGTTCTGTCATCTTCTAATTGTTTACCGGCGAAGA 51882 Query 34577 TTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT- 34635 | | ||| |||||||| || || | || ||||| ||| ||||| | | ||||| | Sbjct 51883 TAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTTTCTTGAATCTTGT-TCTTAACATTG 51941 Query 34636 AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACA 34695 | ||| |||| ||| || || | |||||| || || || || | ||||| || Sbjct 51942 ACAATACTGTCGGAAGACTCAACCTCAAGGGTTATAGTCTTTCCAGTAAGGGTTTTGACG 52001 Query 34696 AAAATCT 34702 ||||||| Sbjct 52002 AAAATCT 52008 >seq304 Length=284809 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 |||||||||||||| || || ||||| || || | ||||| | ||| |||||||| || Sbjct 189537 TCCTTTTGAATGTTGTAGTCAGAAAGAGTACGACCATCTTCTAATTGCTTACCGGCGAAG 189596 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635 || | ||| |||||||| || || | || ||||| ||| |||||| ||| | | Sbjct 189597 ATAAGACGTTGTTGGTCTGGTGGGATACCTTCCTTATCTTGGATCTTAGCTTTGACATTT 189656 Query 34636 AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACA 34695 ||| ||||| | || || || | ||| || || ||||| || | ||||| ||| Sbjct 189657 TCAATAGTGTCGGAGGATTCAACCTCAAGGGTAATGGTCTTACCCGTAAGGGTTTTGACA 189716 Query 34696 AAAATCTGCAT 34706 || || ||||| Sbjct 189717 AAGATTTGCAT 189727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314725629981155