Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_028773.1 Length=182145 Score E Sequences producing significant alignments: (Bits) Value seq3 98.7 1e-15 seq848 91.5 2e-13 seq813 87.8 2e-12 seq363 87.8 2e-12 seq578 84.2 3e-11 seq257 84.2 3e-11 seq82 84.2 3e-11 seq53 84.2 3e-11 seq795 82.4 9e-11 seq70 82.4 9e-11 >seq3 Length=178593 Score = 98.7 bits (108), Expect = 1e-15 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 125487 AAGGCGGTCAGCATCTTAATGTCAATGTTCTGAATCGTGAAACGCTTCAAGATGCAGTAA 125546 |||| | || ||||||||||| ||||| | || |||||||| | ||||||| | | Sbjct 78237 AAGGAGCCCATCATCTTAATGTTAATGTATTAAAACGTGAAACCTTAGAAGATGCTATGA 78178 Query 125547 AACATCCTGAAAAATATCCTCAACTGACCATTCGTGTTTCTGGTTATGCAGTTCGTTTT 125605 ||||||| ||||| ||||| | || ||||||||||| ||||||||||| ||| |||| Sbjct 78177 AACATCCAGAAAATTATCCAAATCTTACCATTCGTGTATCTGGTTATGCTGTTAATTTT 78119 >seq848 Length=195643 Score = 91.5 bits (100), Expect = 2e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 125487 AAGGCGGTCAGCATCTTAATGTCAATGTTCTGAATCGTGAAACGCTTCAAGATGCAGTAA 125546 |||| | ||| ||||||||||| || ||||| || |||||||| | ||||||| | Sbjct 61350 AAGGAGCTCATCATCTTAATGTTAACGTTCTTAAACGTGAAACTTTAGAAGATGCTATGG 61291 Query 125547 AACATCCTGAAAAATATCCTCAACTGACCATTCGTGTTTCTGGTTATGCAGTT 125599 ||||| ||||| ||||| | || || |||||||||||||||||||| ||| Sbjct 61290 CTCATCCAGAAAATTATCCAAATCTTACTATTCGTGTTTCTGGTTATGCTGTT 61238 >seq813 Length=8282 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 125487 AAGGCGGTCAGCATCTTAATGTCAATGTTCTGAATCGTGAAACGCTTCAAGATGCAGTAA 125546 |||| | ||| ||||||||||| || ||||| || |||||||| | ||||||| | Sbjct 6387 AAGGTGCTCATCATCTTAATGTTAACGTTCTTAAACGTGAAACTTTAGAAGATGCTATGG 6328 Query 125547 AACATCCTGAAAAATATCCTCAACTGACCATTCGTGTTTCTGGTTATGCAGTT 125599 ||||| ||||| ||||| | || || ||||||||||||||||| || ||| Sbjct 6327 CTCATCCAGAAAATTATCCAAATCTTACTATTCGTGTTTCTGGTTACGCTGTT 6275 >seq363 Length=62025 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 125487 AAGGCGGTCAGCATCTTAATGTCAATGTTCTGAATCGTGAAACGCTTCAAGATGCAGTAA 125546 |||| | ||| ||||||||||| || ||||| || |||||||| | ||||||| | Sbjct 40178 AAGGTGCTCATCATCTTAATGTTAACGTTCTTAAACGTGAAACTTTAGAAGATGCTATGG 40119 Query 125547 AACATCCTGAAAAATATCCTCAACTGACCATTCGTGTTTCTGGTTATGCAGTT 125599 ||||| ||||| ||||| | || || ||||||||||||||||| || ||| Sbjct 40118 CTCATCCAGAAAATTATCCAAATCTTACTATTCGTGTTTCTGGTTACGCTGTT 40066 >seq578 Length=26404 Score = 84.2 bits (92), Expect = 3e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 125494 TCAGCATCTTAATGTCAATGTTCTGAATCGTGAAACGCTTCAAGATGCAGTAAAACATCC 125553 ||| ||||||||||| || ||||| || |||||||| | ||||||| | || || Sbjct 14744 TCATCATCTTAATGTTAACGTTCTTAAACGTGAAACTTTAGAAGATGCTATGGCTCACCC 14685 Query 125554 TGAAAAATATCCTCAACTGACCATTCGTGTTTCTGGTTATGCAGTT 125599 ||||| ||||| | || || |||||||||||||||||||| ||| Sbjct 14684 AGAAAACTATCCAAACCTTACTATTCGTGTTTCTGGTTATGCTGTT 14639 >seq257 Length=87443 Score = 84.2 bits (92), Expect = 3e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 125494 TCAGCATCTTAATGTCAATGTTCTGAATCGTGAAACGCTTCAAGATGCAGTAAAACATCC 125553 ||| ||||||||||| || ||||| || |||||||| | ||||||| | || || Sbjct 75190 TCATCATCTTAATGTTAACGTTCTTAAACGTGAAACTTTAGAAGATGCTATGGCTCACCC 75131 Query 125554 TGAAAAATATCCTCAACTGACCATTCGTGTTTCTGGTTATGCAGTT 125599 ||||| ||||| | || || |||||||||||||||||||| ||| Sbjct 75130 AGAAAACTATCCAAACCTTACTATTCGTGTTTCTGGTTATGCTGTT 75085 >seq82 Length=363466 Score = 84.2 bits (92), Expect = 3e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 125487 AAGGCGGTCAGCATCTTAATGTCAATGTTCTGAATCGTGAAACGCTTCAAGATGCAGTAA 125546 |||| | ||| ||||||||||| |||||| | || |||||||| | ||||||| | Sbjct 336669 AAGGAGCTCATCATCTTAATGTTAATGTTTTAAAACGTGAAACATTAGAAGATGCTATGG 336728 Query 125547 AACATCCTGAAAAATATCCTCAACTGACCATTCGTGTTTCTGGTTATGCAGTTCGTTTT 125605 |||||| ||||| ||||| | || || |||||||| || || ||||| ||| |||| Sbjct 336729 CACATCCAGAAAATTATCCAAATCTTACAATTCGTGTATCAGGATATGCTGTTAATTTT 336787 Score = 84.2 bits (92), Expect = 3e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 125487 AAGGCGGTCAGCATCTTAATGTCAATGTTCTGAATCGTGAAACGCTTCAAGATGCAGTAA 125546 |||| | ||| ||||||||||| |||||| | || |||||||| | ||||||| | Sbjct 344402 AAGGAGCTCATCATCTTAATGTTAATGTTTTAAAACGTGAAACATTAGAAGATGCTATGG 344343 Query 125547 AACATCCTGAAAAATATCCTCAACTGACCATTCGTGTTTCTGGTTATGCAGTTCGTTTT 125605 |||||| ||||| ||||| | || || |||||||| || || ||||| ||| |||| Sbjct 344342 CACATCCAGAAAATTATCCAAATCTTACAATTCGTGTATCAGGATATGCTGTTAATTTT 344284 Score = 84.2 bits (92), Expect = 3e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 125487 AAGGCGGTCAGCATCTTAATGTCAATGTTCTGAATCGTGAAACGCTTCAAGATGCAGTAA 125546 |||| | ||| ||||||||||| |||||| | || |||||||| | ||||||| | Sbjct 351572 AAGGAGCTCATCATCTTAATGTTAATGTTTTAAAACGTGAAACATTAGAAGATGCTATGG 351631 Query 125547 AACATCCTGAAAAATATCCTCAACTGACCATTCGTGTTTCTGGTTATGCAGTTCGTTTT 125605 |||||| ||||| ||||| | || || |||||||| || || ||||| ||| |||| Sbjct 351632 CACATCCAGAAAATTATCCAAATCTTACAATTCGTGTATCAGGATATGCTGTTAATTTT 351690 >seq53 Length=166033 Score = 84.2 bits (92), Expect = 3e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 125494 TCAGCATCTTAATGTCAATGTTCTGAATCGTGAAACGCTTCAAGATGCAGTAAAACATCC 125553 ||| ||||||||||| || ||||| || |||||||| | ||||||| | || || Sbjct 3128 TCATCATCTTAATGTTAACGTTCTTAAACGTGAAACTTTAGAAGATGCTATGGCTCACCC 3187 Query 125554 TGAAAAATATCCTCAACTGACCATTCGTGTTTCTGGTTATGCAGTT 125599 ||||| ||||| | || || |||||||||||||||||||| ||| Sbjct 3188 AGAAAACTATCCAAACCTTACTATTCGTGTTTCTGGTTATGCTGTT 3233 >seq795 Length=9292 Score = 82.4 bits (90), Expect = 9e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 125487 AAGGCGGTCAGCATCTTAATGTCAATGTTCTGAATCGTGAAACGCTTCAAGATGCAGTAA 125546 |||| | ||| ||||| ||||| || || || || |||||||| | ||||||| | Sbjct 3992 AAGGTGCTCATCATCTCAATGTTAACGTACTTAAACGTGAAACTTTAGAAGATGCTATGG 4051 Query 125547 AACATCCTGAAAAATATCCTCAACTGACCATTCGTGTTTCTGGTTATGCAGTT 125599 ||||| ||||| ||||| | || || |||||||||||||||||||| ||| Sbjct 4052 CTCATCCAGAAAATTATCCAAATCTTACTATTCGTGTTTCTGGTTATGCTGTT 4104 >seq70 Length=153624 Score = 82.4 bits (90), Expect = 9e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 125487 AAGGCGGTCAGCATCTTAATGTCAATGTTCTGAATCGTGAAACGCTTCAAGATGCAGTAA 125546 |||| | ||| ||||| ||||| || || || || |||||||| | ||||||| | Sbjct 120507 AAGGTGCTCATCATCTCAATGTTAACGTACTTAAACGTGAAACTTTAGAAGATGCTATGG 120566 Query 125547 AACATCCTGAAAAATATCCTCAACTGACCATTCGTGTTTCTGGTTATGCAGTT 125599 ||||| ||||| ||||| | || || |||||||||||||||||||| ||| Sbjct 120567 CTCATCCAGAAAATTATCCAAATCTTACTATTCGTGTTTCTGGTTATGCTGTT 120619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582728460853000