Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_029091.1 Length=168771 Score E Sequences producing significant alignments: (Bits) Value seq848 95.1 1e-14 seq813 86.0 7e-12 seq795 86.0 7e-12 seq578 86.0 7e-12 seq363 86.0 7e-12 seq257 86.0 7e-12 seq70 86.0 7e-12 seq53 86.0 7e-12 seq3 86.0 7e-12 >seq848 Length=195643 Score = 95.1 bits (104), Expect = 1e-14 Identities = 119/162 (73%), Gaps = 6/162 (4%) Strand=Plus/Minus Query 123122 TCAACATCTGAACGTTAACGTTCTGCGTCGTGAAACTCTAGAAGATGCAGTTAAGCATCC 123181 ||| ||||| || ||||||||||| ||||||||| |||||||||| | ||||| Sbjct 61343 TCATCATCTTAATGTTAACGTTCTTAAACGTGAAACTTTAGAAGATGCTATGGCTCATCC 61284 Query 123182 AGAAAAATATCCGCAGCTGACCATCCGTGTATCTGGTTATGCAGTTCGCT---TTAACTC 123238 |||||| ||||| | || || || ||||| ||||||||||| ||| || |||| | Sbjct 61283 AGAAAATTATCCAAATCTTACTATTCGTGTTTCTGGTTATGCTGTTAACTTTGTTAAAT- 61225 Query 123239 TCTGACTCCGGAACAGCAGCGCGACGTTATCGCTCGCACCTT 123280 | ||||| |||| || || ||||| ||||| ||||| Sbjct 61224 --TAACTCCACAACAACAAAAAGAAGTTATTGCTCGTACCTT 61185 >seq813 Length=8282 Score = 86.0 bits (94), Expect = 7e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 123122 TCAACATCTGAACGTTAACGTTCTGCGTCGTGAAACTCTAGAAGATGCAGTTAAGCATCC 123181 ||| ||||| || ||||||||||| ||||||||| |||||||||| | ||||| Sbjct 6380 TCATCATCTTAATGTTAACGTTCTTAAACGTGAAACTTTAGAAGATGCTATGGCTCATCC 6321 Query 123182 AGAAAAATATCCGCAGCTGACCATCCGTGTATCTGGTTATGCAGTTCGCTTT 123233 |||||| ||||| | || || || ||||| |||||||| || ||| |||| Sbjct 6320 AGAAAATTATCCAAATCTTACTATTCGTGTTTCTGGTTACGCTGTTAACTTT 6269 >seq795 Length=9292 Score = 86.0 bits (94), Expect = 7e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 123122 TCAACATCTGAACGTTAACGTTCTGCGTCGTGAAACTCTAGAAGATGCAGTTAAGCATCC 123181 ||| ||||| || |||||||| || ||||||||| |||||||||| | ||||| Sbjct 3999 TCATCATCTCAATGTTAACGTACTTAAACGTGAAACTTTAGAAGATGCTATGGCTCATCC 4058 Query 123182 AGAAAAATATCCGCAGCTGACCATCCGTGTATCTGGTTATGCAGTTCGCTTT 123233 |||||| ||||| | || || || ||||| ||||||||||| ||| |||| Sbjct 4059 AGAAAATTATCCAAATCTTACTATTCGTGTTTCTGGTTATGCTGTTAACTTT 4110 >seq578 Length=26404 Score = 86.0 bits (94), Expect = 7e-12 Identities = 117/162 (72%), Gaps = 6/162 (4%) Strand=Plus/Minus Query 123122 TCAACATCTGAACGTTAACGTTCTGCGTCGTGAAACTCTAGAAGATGCAGTTAAGCATCC 123181 ||| ||||| || ||||||||||| ||||||||| |||||||||| | || || Sbjct 14744 TCATCATCTTAATGTTAACGTTCTTAAACGTGAAACTTTAGAAGATGCTATGGCTCACCC 14685 Query 123182 AGAAAAATATCCGCAGCTGACCATCCGTGTATCTGGTTATGCAGTTCGCT---TTAACTC 123238 |||||| ||||| | || || || ||||| ||||||||||| ||| || |||| | Sbjct 14684 AGAAAACTATCCAAACCTTACTATTCGTGTTTCTGGTTATGCTGTTAACTTTGTTAAGT- 14626 Query 123239 TCTGACTCCGGAACAGCAGCGCGACGTTATCGCTCGCACCTT 123280 | ||||| | || || || ||||| ||||| ||||| Sbjct 14625 --TAACTCCAGCTCAACAAAAGGAAGTTATTGCTCGTACCTT 14586 >seq363 Length=62025 Score = 86.0 bits (94), Expect = 7e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 123122 TCAACATCTGAACGTTAACGTTCTGCGTCGTGAAACTCTAGAAGATGCAGTTAAGCATCC 123181 ||| ||||| || ||||||||||| ||||||||| |||||||||| | ||||| Sbjct 40171 TCATCATCTTAATGTTAACGTTCTTAAACGTGAAACTTTAGAAGATGCTATGGCTCATCC 40112 Query 123182 AGAAAAATATCCGCAGCTGACCATCCGTGTATCTGGTTATGCAGTTCGCTTT 123233 |||||| ||||| | || || || ||||| |||||||| || ||| |||| Sbjct 40111 AGAAAATTATCCAAATCTTACTATTCGTGTTTCTGGTTACGCTGTTAACTTT 40060 >seq257 Length=87443 Score = 86.0 bits (94), Expect = 7e-12 Identities = 117/162 (72%), Gaps = 6/162 (4%) Strand=Plus/Minus Query 123122 TCAACATCTGAACGTTAACGTTCTGCGTCGTGAAACTCTAGAAGATGCAGTTAAGCATCC 123181 ||| ||||| || ||||||||||| ||||||||| |||||||||| | || || Sbjct 75190 TCATCATCTTAATGTTAACGTTCTTAAACGTGAAACTTTAGAAGATGCTATGGCTCACCC 75131 Query 123182 AGAAAAATATCCGCAGCTGACCATCCGTGTATCTGGTTATGCAGTTCGCT---TTAACTC 123238 |||||| ||||| | || || || ||||| ||||||||||| ||| || |||| | Sbjct 75130 AGAAAACTATCCAAACCTTACTATTCGTGTTTCTGGTTATGCTGTTAACTTTGTTAAGT- 75072 Query 123239 TCTGACTCCGGAACAGCAGCGCGACGTTATCGCTCGCACCTT 123280 | ||||| | || || || ||||| ||||| ||||| Sbjct 75071 --TAACTCCAGCTCAACAAAAGGAAGTTATTGCTCGTACCTT 75032 >seq70 Length=153624 Score = 86.0 bits (94), Expect = 7e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 123122 TCAACATCTGAACGTTAACGTTCTGCGTCGTGAAACTCTAGAAGATGCAGTTAAGCATCC 123181 ||| ||||| || |||||||| || ||||||||| |||||||||| | ||||| Sbjct 120514 TCATCATCTCAATGTTAACGTACTTAAACGTGAAACTTTAGAAGATGCTATGGCTCATCC 120573 Query 123182 AGAAAAATATCCGCAGCTGACCATCCGTGTATCTGGTTATGCAGTTCGCTTT 123233 |||||| ||||| | || || || ||||| ||||||||||| ||| |||| Sbjct 120574 AGAAAATTATCCAAATCTTACTATTCGTGTTTCTGGTTATGCTGTTAACTTT 120625 >seq53 Length=166033 Score = 86.0 bits (94), Expect = 7e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 123122 TCAACATCTGAACGTTAACGTTCTGCGTCGTGAAACTCTAGAAGATGCAGTTAAGCATCC 123181 ||| ||||| || ||||||||||| ||||||||| |||||||||| | || || Sbjct 3128 TCATCATCTTAATGTTAACGTTCTTAAACGTGAAACTTTAGAAGATGCTATGGCTCACCC 3187 Query 123182 AGAAAAATATCCGCAGCTGACCATCCGTGTATCTGGTTATGCAGTTCGCTTT 123233 |||||| ||||| | || || || ||||| ||||||||||| ||| |||| Sbjct 3188 AGAAAACTATCCAAACCTTACTATTCGTGTTTCTGGTTATGCTGTTAACTTT 3239 >seq3 Length=178593 Score = 86.0 bits (94), Expect = 7e-12 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 123123 CAACATCTGAACGTTAACGTTCTGCGTCGTGAAACTCTAGAAGATGCAGTTAAGCATCCA 123182 || ||||| || ||||| || | |||||||| |||||||||| | || |||||| Sbjct 78229 CATCATCTTAATGTTAATGTATTAAAACGTGAAACCTTAGAAGATGCTATGAAACATCCA 78170 Query 123183 GAAAAATATCCGCAGCTGACCATCCGTGTATCTGGTTATGCAGTT 123227 ||||| ||||| | || ||||| ||||||||||||||||| ||| Sbjct 78169 GAAAATTATCCAAATCTTACCATTCGTGTATCTGGTTATGCTGTT 78125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 539932214536600