Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq615 84.2 2e-11 >seq615 Length=217977 Score = 84.2 bits (92), Expect = 2e-11 Identities = 205/305 (67%), Gaps = 7/305 (2%) Strand=Plus/Plus Query 118824 ATATTCTGCCCCAAAAAATCTCCATTGAAAACCATAAACAGGCCCCAGATCTCCCTGGGA 118883 ||||| || |||||| | |||||| ||||||| | || || | ||| || | Sbjct 39754 ATATTTAGCACCAAAATGACGCCATTGCCAACCATATATTGGTCCTAAATCACCTTCCTC 39813 Query 118884 CCTAAAATCTAAACCTACTTTTCTCT-GAAATTCTTTTGACCCATTAGCATTCCAAATAG 118942 ||| |||||| | |||| || ||||||| || |||||| | | ||| ||| Sbjct 39814 TCTATCTGTTAAACCAA-TTTTATCAAGAAATTCACGGGAACCATTACCTTCCCATATAT 39872 Query 118943 CAACTCCtttttttGCCAG-ATCATTAGAGTTTGTAGAACCACTTAAAAACCAAAGAAGC 119001 || |||||| |||| | || || | | ||| ||| ||||||||||||| | Sbjct 39873 GAATTCCTTTCTTTGATAATATTTTTCCA-TCAGTATCACCTCTTAAAAACCAAAACAAT 39931 Query 119002 TCCTCAACAACGCCTCTCCAAAAAACTGTTTTTGTTGTAAACAGTGGAAACTGACCTCTA 119061 || || | || ||||| ||||||| |||||||||| || | |||||| || || | Sbjct 39932 TCTTCTGCTACACCTCTGAAAAAAACCTTTTTTGTTGTTAATAATGGAAAATGGTCTTTT 39991 Query 119062 AGTGAATATCTT---GTTTGTGTTCCAAAAATAGACAGAGTCCCAACACCTGTTCTATCA 119118 || || ||||| | | || ||||| || | |||| ||| ||||||||||||| Sbjct 39992 AGAGAGAATCTTAAGGGATTTGGACCAAATATTGCTCGAGTTCCAGTACCTGTTCTATCA 40051 Query 119119 TCTCT 119123 | ||| Sbjct 40052 TTTCT 40056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414471571763740