Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq179 132 3e-26 seq748 131 1e-25 seq172 114 9e-21 seq53 100 2e-16 >seq179 Length=111796 Score = 132 bits (146), Expect = 3e-26 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 23615 AGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACA 23674 ||||||| |||||||| ||||| || || || || || | |||||||| || | |||| Sbjct 96570 AGATTTTTGTTAAAACTCTCACTGGTAAGACCATTACCTTAGAAGTTGAATCTTCTGACA 96511 Query 23675 CTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGC 23734 || |||||| | ||| || ||| || || |||||| | || ||||||||||| | Sbjct 96510 CTATTGAAAATGTCAAAGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGATCAACAAC 96451 Query 23735 GTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATAC 23794 ||||||| |||||||| |||||| | ||||| | || ||| | ||||||||||| | Sbjct 96450 GTTTAATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAACATTC 96391 Query 23795 AAAAAGAGTCCACATTACATTTAGTT 23820 ||||||| || || | ||| | ||| Sbjct 96390 AAAAAGAATCTACTCTTCATCTTGTT 96365 >seq748 Length=202608 Score = 131 bits (144), Expect = 1e-25 Identities = 159/214 (74%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| ||||| || | || || || || |||||| | |||||||| || | Sbjct 91427 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAGACTATCACTTTAGAAGTTGAATCTTCT 91486 Query 23671 GACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| |||||| | ||||| | || | || || ||||||||| | || ||||| || Sbjct 91487 GATACTATTGAAAATGTTAAAGCTAAGA-TTCAAGATAAAGAAGGTATTCCACCAGACCA 91545 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| ||| | || ||||| || |||||| | ||||| | ||| ||| | |||||||| Sbjct 91546 ACAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAA 91605 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823 ||| |||||||| || || | || ||||||||| Sbjct 91606 CATTCAAAAAGAATCTACTCTTCACTTAGTTTTA 91639 Score = 127 bits (140), Expect = 1e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 23596 AATTAATTACTTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTC 23655 || ||| || | || ||||| ||||| ||||| || | || || ||||| |||||| | Sbjct 90956 AAATAAATAGTAAAGATGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATCACTTTA 91015 Query 23656 GAAGTTGACTCCACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGT 23715 |||||||| || | || ||| |||||| | ||| || ||| || || |||||| Sbjct 91016 GAAGTTGAATCTTCTGATACTATTGAAAATGTCAAAGCTAAGATTCAAGATAAGGAAGGT 91075 Query 23716 GTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACT 23775 | || ||||| ||||| ||| | || ||||| || |||||| | ||||| | ||| ||| Sbjct 91076 ATTCCACCAGACCAACAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACT 91135 Query 23776 TTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823 | ||||||||||| |||||||| || || | || ||||| ||| Sbjct 91136 CTTTCTGATTACAACATTCAAAAAGAATCTACTCTTCACTTAGTCTTA 91183 Score = 123 bits (136), Expect = 2e-23 Identities = 158/214 (74%), Gaps = 3/214 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| ||||| || | || || ||||| || ||| | |||||||| || | Sbjct 92339 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATTACTTTAGAAGTTGAATCTTCT 92398 Query 23671 GACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| |||||| | ||||| | || | || || || |||||| | || ||||| || Sbjct 92399 GATACTATTGAAAATGTTAAAGCTAAGA-TTCAAGATAA-GAAGGTATTCCACCAGACCA 92456 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| ||| | || ||||| || |||||| | ||||| | ||| ||| | |||||||| Sbjct 92457 ACAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAA 92516 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823 ||| |||||||| || || | || ||||||||| Sbjct 92517 CATTCAAAAAGAATCTACTCTCCACTTAGTTTTA 92550 Score = 122 bits (134), Expect = 6e-23 Identities = 157/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| ||||| || | || || ||||| || ||| | |||||||| || | Sbjct 92111 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATTACTTTAGAAGTTGAATCTTCT 92170 Query 23671 GACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| |||||| | ||||| | || | || || || |||||| | || ||||| || Sbjct 92171 GATACTATTGAAAATGTTAAAGCTAAGA-TTCAAGATAAGGAAGGTATTCCACCAGACCA 92229 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| ||| | || ||||| || |||||| | ||||| | ||| ||| | |||||||| Sbjct 92230 ACAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAA 92289 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823 ||| |||||||| || || | || ||||| ||| Sbjct 92290 CATTCAAAAAGAATCTACTCTCCACTTAGTCTTA 92323 Score = 118 bits (130), Expect = 7e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| ||||| || | || || ||||| || ||| | ||||| || || | Sbjct 91199 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATTACTTTAGAAGTAGAATCTTCT 91258 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||||| | ||| || ||| || ||||||||| | || ||||| ||| Sbjct 91259 GATACCATTGAAAATGTCAAAGCTAAGATTCAAGATAAAGAAGGTATTCCACCAGACCAA 91318 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||| | || ||||| || |||||| | ||||| | ||| ||| | ||||||||| Sbjct 91319 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAAC 91378 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823 || |||||||| || || | || ||||||||| Sbjct 91379 ATTCAAAAAGAATCTACTCTTCACTTAGTTTTA 91411 Score = 118 bits (130), Expect = 7e-22 Identities = 156/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| ||||| || | || || || || |||||| | ||||| || || | Sbjct 91883 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAGACTATCACTTTAGAAGTAGAATCTTCT 91942 Query 23671 GACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| |||||| | ||||| | || | || || || |||||| | || ||||| || Sbjct 91943 GATACTATTGAAAATGTTAAAGCTAAGA-TTCAAGATAAGGAAGGTATTCCACCAGACCA 92001 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| ||| | || ||||| || |||||| | ||||| | ||| ||| | |||||||| Sbjct 92002 ACAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAA 92061 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823 ||| |||||||| || || | || ||||| ||| Sbjct 92062 CATTCAAAAAGAATCTACTCTTCACTTAGTCTTA 92095 Score = 114 bits (126), Expect = 9e-21 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| ||||| || | || || ||||| || ||| | ||||| || || | Sbjct 91655 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATTACTTTAGAAGTAGAATCTTCT 91714 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||||| | ||| || ||| || ||||||||| | || ||||| ||| Sbjct 91715 GATACCATTGAAAATGTCAAAGCTAAGATTCAAGATAAAGAAGGTATTCCACCAGACCAA 91774 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||| | || ||||| || |||||| | ||||| | ||| ||| | ||||||||| Sbjct 91775 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAAC 91834 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823 || |||||||| || || | || ||||| ||| Sbjct 91835 ATTCAAAAAGAATCTACTCTTCACTTAGTCTTA 91867 >seq172 Length=114120 Score = 114 bits (126), Expect = 9e-21 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || ||| | || || || || ||||| | ||||| || || | Sbjct 113839 ATGCAAATCTTCGTAAAGACCTTGACTGGTAAGACTATCACCTTAGAAGTAGAATCTTCT 113898 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| |||||| | ||| |||||| || || |||||| | || ||||||||| Sbjct 113899 GACACTATTGAAAATGTCAAAGCTAAAATTCAAGATAAGGAAGGTATTCCTCCAGATCAA 113958 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||| | || ||||| || || ||| | ||||| | ||| ||| | ||||| || Sbjct 113959 CAACGTCTTATTTTTGCTGGTAAGCAATTAGAAGATGGACGTACTCTTTCTGATTATAAT 114018 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823 || |||||||| || ||| | || ||||| ||| Sbjct 114019 ATTCAAAAAGAATCTACACTCCACTTAGTCTTA 114051 >seq53 Length=166033 Score = 100 bits (110), Expect = 2e-16 Identities = 147/204 (72%), Gaps = 3/204 (1%) Strand=Plus/Plus Query 23596 AATTAATTACTTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTC 23655 || |||||| || || |||||||| || || ||||| || ||||| || || || || Sbjct 113200 AAATAATTAATTTCAAA-CAGATTTTTGTAAAGACCCTTACCGGAAAGACTATAACCCTT 113258 Query 23656 GAAGTTGACTCCACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGG 23714 || ||||| || | |||| ||| ||| |||| ||||| || || || ||||| Sbjct 113259 GAGGTTGAATCTTCCGACAGCATTGTTAATGTTAAG-CAAAAGATCCAAGAAAAGGAAGG 113317 Query 23715 TGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCAC 23774 | | || ||||||||||| |||||||| || || || || ||| | ||||| || || || Sbjct 113318 TATTCCACCAGATCAACAACGTTTAATTTTCGCTGGTAAGCAATTAGAAGATGACCGTAC 113377 Query 23775 TTTAGGCGATTACAACATACAAAA 23798 | | || |||||||| ||||| Sbjct 113378 TCTTTCTGACTACAACATCCAAAA 113401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338005336325780