Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq748 102 7e-17 >seq748 Length=202608 Score = 102 bits (112), Expect = 7e-17 Identities = 163/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 101026 TAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATC 101085 ||| || | ||| | ||| |||||||||||||| |||||||| | | ||| ||| Sbjct 91183 TAAGACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATC 91124 Query 101086 TTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTC 101145 ||| |||||||| || ||| | ||||| | |||||||||| || | ||||| || || Sbjct 91123 TTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATC 91064 Query 101146 GGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGT 101205 ||| || ||| |||| | | || || | || ||| | || ||||| Sbjct 91063 TTGAATCTTAGCTTTGACATTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTGATAGT 91004 Query 101206 TTTGCCCGTCAATGTTTTAATAAAAATTTGCATTATTACAATATATTTTTTACT 101259 ||| || || || || |||| |||||||||||| |||| || ||||| ||||| Sbjct 91003 TTTACCAGTTAAAGTCTTAACAAAAATTTGCATCTTTACTATTTATTTATTACT 90950 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 101026 TAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATC 101085 ||| || | ||| | ||| |||||||||||||| |||||||| | | ||| ||| Sbjct 91411 TAAAACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATC 91352 Query 101086 TTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTC 101145 ||| |||||||| || ||| | ||||| | |||||||||| || | |||||||| || Sbjct 91351 TTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATC 91292 Query 101146 GGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGT 101205 ||| || ||| |||| | | || || | || | ||| | |||||||| Sbjct 91291 TTGAATCTTAGCTTTGACATTTTCAATGGTATCAGAAGATTCTACTTCTAAAGTAATAGT 91232 Query 101206 TTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 ||| || || || || |||| |||||||||||| Sbjct 91231 TTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 91199 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 101026 TAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATC 101085 ||| || | ||| | ||| |||||||||||||| |||||||| | | ||| ||| Sbjct 91867 TAAGACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATC 91808 Query 101086 TTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTC 101145 ||| |||||||| || ||| | ||||| | |||||||||| || | |||||||| || Sbjct 91807 TTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATC 91748 Query 101146 GGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGT 101205 ||| || ||| |||| | | || || | || | ||| | |||||||| Sbjct 91747 TTGAATCTTAGCTTTGACATTTTCAATGGTATCAGAAGATTCTACTTCTAAAGTAATAGT 91688 Query 101206 TTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 ||| || || || || |||| |||||||||||| Sbjct 91687 TTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 91655 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 101026 TAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATC 101085 ||| || | ||| | ||| |||||||||||||| |||||||| | | ||| ||| Sbjct 92323 TAAGACTAAGTGGAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATC 92264 Query 101086 TTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTC 101145 ||| |||||||| || ||| | ||||| | |||||||||| || | ||||| || || Sbjct 92263 TTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATC 92204 Query 101146 GGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGT 101205 ||| || ||| |||| | | || || | || ||| | |||||||| Sbjct 92203 TTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTAATAGT 92144 Query 101206 TTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 ||| || || || || |||| |||||||||||| Sbjct 92143 TTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 92111 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 101026 TAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATC 101085 ||| || | ||| | ||| |||||||||||||| |||||||| | | ||| ||| Sbjct 91639 TAAAACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATC 91580 Query 101086 TTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTC 101145 ||| |||||||| || ||| | ||||| | |||||||||| || | |||||||| || Sbjct 91579 TTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATC 91520 Query 101146 GGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGT 101205 ||| || ||| |||| | | || || | || ||| | || ||||| Sbjct 91519 TTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTGATAGT 91460 Query 101206 TTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 || || || || || |||| |||||||||||| Sbjct 91459 CTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 91427 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 101026 TAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATC 101085 ||| || | ||| | ||| |||||||||||||| |||||||| | | ||| ||| Sbjct 92095 TAAGACTAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATC 92036 Query 101086 TTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTC 101145 ||| |||||||| || ||| | ||||| | |||||||||| || | ||||| || || Sbjct 92035 TTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATC 91976 Query 101146 GGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGT 101205 ||| || ||| |||| | | || || | || | ||| | || ||||| Sbjct 91975 TTGAATCTTAGCTTTAACATTTTCAATAGTATCAGAAGATTCTACTTCTAAAGTGATAGT 91916 Query 101206 TTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 || || || || || |||| |||||||||||| Sbjct 91915 CTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 91883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409655632513065