Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq748 123 6e-23 seq304 122 2e-22 seq179 118 2e-21 seq172 111 4e-19 seq233 102 2e-16 >seq748 Length=202608 Score = 123 bits (136), Expect = 6e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 151902 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTT 151961 ||||||||||| |||||||| ||||||||||| | | ||| | |||||||||| | Sbjct 91401 TGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCTAATTGT 91342 Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 || || || || ||||| | || ||||| | | || ||||| || |||||||| || Sbjct 91341 TTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATCTTGAATCTTA 91282 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081 ||||||| | || | | | || ||| |||||||| | |||||||||||| || || Sbjct 91281 GCTTTGACATTTTCAATGGTATCAGAAGATTCTACTTCTAAAGTAATAGTTTTACCAGTT 91222 Query 152082 AGAGTCTTCACGAAGACCTGCAT 152104 | |||||| || || | ||||| Sbjct 91221 AAAGTCTTAACAAAAATTTGCAT 91199 Score = 123 bits (136), Expect = 6e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 151902 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTT 151961 ||||||||||| |||||||| ||||||||||| | | ||| | |||||||||| | Sbjct 91857 TGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCTAATTGT 91798 Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 || || || || ||||| | || ||||| | | || ||||| || |||||||| || Sbjct 91797 TTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATCTTGAATCTTA 91738 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081 ||||||| | || | | | || ||| |||||||| | |||||||||||| || || Sbjct 91737 GCTTTGACATTTTCAATGGTATCAGAAGATTCTACTTCTAAAGTAATAGTTTTACCAGTT 91678 Query 152082 AGAGTCTTCACGAAGACCTGCAT 152104 | |||||| || || | ||||| Sbjct 91677 AAAGTCTTAACAAAAATTTGCAT 91655 Score = 116 bits (128), Expect = 9e-21 Identities = 152/209 (73%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 151902 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTT 151961 ||||||||||| |||||||| ||||||||||| | | ||| | |||||||||| | Sbjct 91173 TGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCTAATTGT 91114 Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 || || || || ||||| | || ||||| | | || |||||||| |||||||| || Sbjct 91113 TTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATCTTGAATCTTA 91054 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081 ||||||| | || | | || ||| || ||||| | ||| |||||||| || || Sbjct 91053 GCTTTGACATTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTGATAGTTTTACCAGTT 90994 Query 152082 AGAGTCTTCACGAAGACCTGCAT-TTTAC 152109 | |||||| || || | ||||| ||||| Sbjct 90993 AAAGTCTTAACAAAAATTTGCATCTTTAC 90965 Score = 109 bits (120), Expect = 1e-18 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 151902 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTT 151961 ||||||||||| |||||||| ||||||||||| | | ||| | |||||||||| | Sbjct 92085 TGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCTAATTGT 92026 Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 || || || || ||||| | || ||||| | | || |||||||| |||||||| || Sbjct 92025 TTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATCTTGAATCTTA 91966 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081 ||| ||| | || | | || ||| |||||||| | ||| ||||| || || || Sbjct 91965 GCTTTAACATTTTCAATAGTATCAGAAGATTCTACTTCTAAAGTGATAGTCTTACCAGTT 91906 Query 152082 AGAGTCTTCACGAAGACCTGCAT 152104 | |||||| || || | ||||| Sbjct 91905 AAAGTCTTAACAAAAATTTGCAT 91883 Score = 109 bits (120), Expect = 1e-18 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 151902 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTT 151961 || |||||||| |||||||| ||||||||||| | | ||| | |||||||||| | Sbjct 92313 TGGAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCTAATTGT 92254 Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 || || || || ||||| | || ||||| | | || |||||||| |||||||| || Sbjct 92253 TTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATCTTGAATCTTA 92194 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081 ||| ||| | || | | || ||| || ||||| | |||||||||||| || || Sbjct 92193 GCTTTAACATTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTAATAGTTTTACCAGTT 92134 Query 152082 AGAGTCTTCACGAAGACCTGCAT 152104 | |||||| || || | ||||| Sbjct 92133 AAAGTCTTAACAAAAATTTGCAT 92111 Score = 102 bits (112), Expect = 2e-16 Identities = 145/203 (71%), Gaps = 1/203 (0%) Strand=Plus/Minus Query 151902 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTT 151961 || |||||||| |||||||| ||||||||||| | | ||| | |||||||||| | Sbjct 92540 TGGAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCTAATTGT 92481 Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 || || || || ||||| | || ||||| | | || |||| ||| |||||||| || Sbjct 92480 TTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTT-CTTATCTTGAATCTTA 92422 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081 ||| ||| | || | | || ||| || ||||| | |||||||||||| || || Sbjct 92421 GCTTTAACATTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTAATAGTTTTACCAGTT 92362 Query 152082 AGAGTCTTCACGAAGACCTGCAT 152104 | |||||| || || | ||||| Sbjct 92361 AAAGTCTTAACAAAAATTTGCAT 92339 Score = 100 bits (110), Expect = 7e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 151902 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTT 151961 ||||||||||| |||||||| ||||||||||| | | ||| | |||||||||| | Sbjct 91629 TGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGTCCATCTTCTAATTGT 91570 Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 || || || || ||||| | || ||||| | | || ||||| || |||||||| || Sbjct 91569 TTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATCTTGAATCTTA 91510 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081 ||| ||| | || | | || ||| || ||||| | ||| ||||| || || || Sbjct 91509 GCTTTAACATTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTGATAGTCTTACCAGTT 91450 Query 152082 AGAGTCTTCACGAAGACCTGCAT 152104 | |||||| || || | ||||| Sbjct 91449 AAAGTCTTAACAAAAATTTGCAT 91427 >seq304 Length=284809 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||||||||| | |||||| || ||||| |||||||| || | | ||| | |||||| Sbjct 189516 AGGACAAGATGTAAAGTAGATTCCTTTTGAATGTTGTAGTCAGAAAGAGTACGACCATCT 189575 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 |||| || |||||||||||||| | || ||||| | | ||| |||||||| ||| Sbjct 189576 TCTAATTGCTTACCGGCGAAGATAAGACGTTGTTGGTCTGGTGGGATACCTTCCTTATCT 189635 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||||||| | || | |||| || || || ||||| ||||| || Sbjct 189636 TGGATCTTAGCTTTGACATTTTCAATAGTGTCGGAGGATTCAACCTCAAGGGTAATGGTC 189695 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || || || || |||| ||||| Sbjct 189696 TTACCCGTAAGGGTTTTGACAAAGATTTGCAT 189727 >seq179 Length=111796 Score = 118 bits (130), Expect = 2e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || ||||||||||||||||| |||||||| ||||||||||| | | ||| | |||||| Sbjct 96363 AGAACAAGATGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGACCATCT 96422 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 |||| ||| ||||| ||||| | | || || || | | || |||||||| ||| Sbjct 96423 TCTAATTGTTTACCGGCAAAGATTAAACGTTGTTGATCTGGTGGAATACCTTCCTTATCT 96482 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || ||||||| | || | |||| ||| || ||||| | ||||| || Sbjct 96483 TGAATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATGGTC 96542 Query 152073 TTGCCCGTGAGAGTCTTCACGAA 152095 || || |||||||| || || || Sbjct 96543 TTACCAGTGAGAGTTTTAACAAA 96565 >seq172 Length=114120 Score = 111 bits (122), Expect = 4e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 151902 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTT 151961 || || ||||| |||||||| || || ||||| | | ||| | |||||||||| Sbjct 112901 TGGAGTGTAGATTCTTTTTGAATATTATAATCAGAAAGAGTACGTCCATCTTCTAATTGC 112842 Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 || || || || ||||| | || ||||| | | ||||||||||| |||||||| || Sbjct 112841 TTACCAGCAAAAATAAGACGTTGTTGGTCTGGAGGAATTCCTTCCTTGTCTTGAATCTTA 112782 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081 ||||||| | || | |||| ||| |||||||| | || ||||| || || || Sbjct 112781 GCTTTGACATTTTCAATAGTGTCAGAAGATTCTACTTCTAAGGTGATAGTCTTACCAGTT 112722 Query 152082 AGAGTCTTCACGAAGACCTGCATTTT 152107 | |||||| ||||||| |||||||| Sbjct 112721 AAAGTCTTTACGAAGATTTGCATTTT 112696 Score = 96.9 bits (106), Expect = 8e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 151902 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTT 151961 || || ||||| |||||||| || || ||||| | | ||| | |||||||||| Sbjct 114041 TGGAGTGTAGATTCTTTTTGAATATTATAATCAGAAAGAGTACGTCCATCTTCTAATTGC 113982 Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 || || || || ||||| | || || || | | || |||||||| ||||||||||| Sbjct 113981 TTACCAGCAAAAATAAGACGTTGTTGATCTGGAGGAATACCTTCCTTATCTTGAATTTTA 113922 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081 ||||||| | || | |||| ||| |||||||| | || ||||| || || || Sbjct 113921 GCTTTGACATTTTCAATAGTGTCAGAAGATTCTACTTCTAAGGTGATAGTCTTACCAGTC 113862 Query 152082 AGAGTCTTCACGAAGACCTGCAT 152104 | ||||| ||||||| ||||| Sbjct 113861 AAGGTCTTTACGAAGATTTGCAT 113839 >seq233 Length=93418 Score = 102 bits (112), Expect = 2e-16 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976 ||||| |||||||| || | | ||||| ||||||||| ||| |||||||||||| Sbjct 51825 TTTTGAATGTTGTAGTCAGAAAGGGTTCTGTCATCTTCTAATTGTTTACCGGCGAAGATA 51884 Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036 || | || ||||| | | || ||||||||||||||||| || | || ||| | | Sbjct 51885 AGACGTTGTTGGTCTGGTGGAATACCTTCCTTTTCTTGAATCTTGTTCTTAACATTGACA 51944 Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAA 152095 | ||||| ||| ||| || ||||| || ||||| || || || || || || ||||| Sbjct 51945 ATACTGTCGGAAGACTCAACCTCAAGGGTTATAGTCTTTCCAGTAAGGGTTTTGACGAA 52003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153805499254485