Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Batrachochytrium_20salamandrivorans_20[genbank_20GCA_5F002006685.1_2 02017-02-24] 5,358 sequences; 32,636,440 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq691 104 2e-17 >seq691 Length=12334 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 97009 GGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACATAA 97068 ||||| || || ||||| ||| | ||| | | || ||||| ||||||| ||| Sbjct 1284 GGGAAGGGTCTTGGAGTACGCTCCAATTGCACGTTCAGCGCATCTATGTGATCGCAATAC 1225 Query 97069 ATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCG 97128 | || |||||||| ||| ||| | |||||| ||||| || || ||||| || Sbjct 1224 ACATGCGCATCTCCCAAACAGTGCACAAATTCACCAGGCTGGAATCCACATACATGCGCC 1165 Query 97129 ATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCA 97188 | ||| ||| | || | |||||||||||||||||||| || ||||||||||||||| Sbjct 1164 AACATTATAGTGAGAAGTGCGTAGCTAGCAATGTTAAAAGGTACTCCTAGTCCCATATCA 1105 Query 97189 GCTGATCTTTGATATAACTGACAGGAAAGC 97218 ||||| ||||| | ||| || || ||| Sbjct 1104 CACGATCTCTGATACAGCTGGCATGAGAGC 1075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346761354788060