Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Batrachochytrium_20salamandrivorans_20[genbank_20GCA_5F002006685.1_2 02017-02-24] 5,358 sequences; 32,636,440 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq3174 84.2 3e-11 >seq3174 Length=2562 Score = 84.2 bits (92), Expect = 3e-11 Identities = 114/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 124535 TACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGC 124594 ||||||||||||||| | ||||| || || ||||| || || || | ||| | || | Sbjct 1671 TACAATGCAAATATTCGTCAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTAGAGTC 1730 Query 124595 AAATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGA 124654 |||||| ||| ||| | || || |||||||| || ||||| || |||||||| Sbjct 1731 TTCTGATACTATTGACAATGTCAAGGCCAAGATTCAAGACAAGGAAGGAATCCCACCTGA 1790 Query 124655 TCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGA 124693 || || | || || ||||| ||||| ||| | ||||| Sbjct 1791 CCAGCAGCGTCTCATCTTTGCTGGAAAGCAACTCGAGGA 1829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755405403334400