Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Batrachochytrium_20salamandrivorans_20[genbank_20GCA_5F002006685.1_2 02017-02-24] 5,358 sequences; 32,636,440 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq274 89.7 3e-13 seq1447 82.4 5e-11 >seq274 Length=20666 Score = 89.7 bits (98), Expect = 3e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || ||||| | |||| |||||||| || ||||| || || || |||| | || Sbjct 19197 AGAACAAGGTGAAGAGTAGACTCTTTCTGGATATTGTAATCCGAAAGAGTACGGCCATCC 19138 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||| || |||||||| | ||||||||||| ||| | | ||| || || Sbjct 19137 TCAAGCTGCTTTCCAGCGAAAATCAAACGCTGCTGGTCAGGGGGGATTCCCTCTTTATCT 19078 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | || | |||| || ||||| |||| ||||| || Sbjct 19077 TGGATCTTGGCCTTGACATTATCAATGGTGTCGGATGACTCGACTTCCAAGGTGATTGTC 19018 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || || || || || |||||||| ||||| Sbjct 19017 TTACCCGTAAGGGTCTTGACAAAGATTTGCAT 18986 >seq1447 Length=6688 Score = 82.4 bits (90), Expect = 5e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || ||||| | |||| || ||||| ||||||||||| || || |||| |||| Sbjct 2198 AGAACAAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCTGAAAGAGTACGGCCGTCT 2257 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC 34275 || | ||||||||| |||||||| || ||||||||||| Sbjct 2258 TCAAGCTGCTTGCCAGCGAAAATCAGACGCTGCTGGTC 2295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323050903196480