Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Batrachochytrium_20salamandrivorans_20[genbank_20GCA_5F002006685.1_2 02017-02-24] 5,358 sequences; 32,636,440 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq624 96.9 3e-15 >seq624 Length=13322 Score = 96.9 bits (106), Expect = 3e-15 Identities = 292/444 (66%), Gaps = 14/444 (3%) Strand=Plus/Plus Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003 || ||||| || | |||| ||||||||| || || ||||| |||| | || ||| || Sbjct 7370 TTCTGATACTCGCCGACTCGCTTTTCAAAAAAGTTGGTTTTGCCTTGCAGAGAGATAATT 7429 Query 16004 TCCATAAAATCAAAAGGATTTTTTGAACAATAGTAT--TTATCGCATCCCAA-TTCCAAC 16060 ||||| |||||||| ||||| | ||| |||| || | | ||| | |||||| Sbjct 7430 TCCATGAAATCAAATGGATTCTC--AACGCC-GTATGCTTTGGGGAGCCCGAGTTCCAAA 7486 Query 16061 AATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATT 16120 || | | || || ||||| || ||||| ||||| | || ||||| || || Sbjct 7487 AAGAGACGGTCAGCAACAAACTCAATATATCTCTTCATGAGATTGGCATTCATGCCAATC 7546 Query 16121 AATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATT 16180 | | ||| |||| || || || | || | | ||| ||| ||| || || | | Sbjct 7547 AGTGCAACTGGGAGCGCCTCGGTCAGGAACTCCTGTTCAATAGCAACTGCCTCGGTCAAG 7606 Query 16181 ATATCTCTTACTACACTATTTAACGGAGGGTTTAAT----AAGTGTTTAAACATTATACA 16236 || | || || | | | | | || ||| | | | || | |||| || ||| Sbjct 7607 ATTTGGTGCACAAC-CGAGT---CTGCTGGCTTATTCTTGAGGAGTGTGAACAATAGACA 7662 Query 16237 AGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACC 16296 |||||| || ||| | || || || | || |||||||| || ||||| || || Sbjct 7663 AGCAAAGTCGGTATGAAGACCCTCATCACGTGAAATCAACTCGTTAGAGAATGTCAGGCC 7722 Query 16297 TGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATAT 16356 ||||| || || ||||| || | |||||| || || ||||| || || || || || || Sbjct 7723 GGGCATAAGACCACGTTTCTTGAGCCAAAAGATGGCTGCAAAGGATCCTGAGAAAAAGAT 7782 Query 16357 ACCTTCAACTGCGGCAAATGCAAC 16380 ||| || || || ||||||||||| Sbjct 7783 ACCCTCGACAGCAGCAAATGCAAC 7806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462481023258800