Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Batrachochytrium_20salamandrivorans_20[genbank_20GCA_5F002006685.1_2 02017-02-24] 5,358 sequences; 32,636,440 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq624 96.9 3e-15 >seq624 Length=13322 Score = 96.9 bits (106), Expect = 3e-15 Identities = 226/331 (68%), Gaps = 19/331 (6%) Strand=Plus/Plus Query 14429 GTTTCAATAGCATTAAATAAA--TGT----TCCTTCTCTTTAGTACTTGAAATGTATGTA 14482 || |||||||||| ||||||| ||| |||||| || || ||||| || ||||| Sbjct 8045 GTATCAATAGCATCAAATAAAAATGTACGCTCCTTC-CT---GTCCTTGACAT--ATGTA 8098 Query 14483 TCAATAAGTAAGCTA-TACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATA 14541 ||||| | | ||| | ||||| ||| ||| |||||||| || ||||| || || || Sbjct 8099 TCAATCAAT-AGCGAGTACATCTCACTGTGGATGTTTTCAATCATGATCTGGAAGCCGTA 8157 Query 14542 AAAACATCTAGCTTCTGACCATTGTACCTC-TGAGTAAAATCTTTCGGCCAAATTTTCAT 14600 ||| | | |||||| | ||| || || |||| |||||| || | | ||| |||| Sbjct 8158 GAAATAGCGAGCTTCGAAAATTTGAACATCTTGAG-AAAATCGCTCAACAAGATTCTCAT 8216 Query 14601 TAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTT 14660 |||| || |||||| || || ||||| ||||| | ||||||||| | || | Sbjct 8217 TAACAATGCCATCAGAGGCAGCGAAAAAGGCCAACACACGAGAAATAAAGTAGCGTTCAT 8276 Query 14661 CATTGCTGA---GTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTG 14717 ||| | | | | || ||| || || || ||||| |||||||| || | | Sbjct 8277 CATCAGTAAGACGCTCTTCCCAGTCAATGGTGTCTTTTGAAAGGTCTACTTCCTCGGCAG 8336 Query 14718 TCCAAAAACTAGCAACAGCTTTTTTATACAT 14748 |||| ||| ||| | |||||||| ||||| Sbjct 8337 TCCAGAAAGAAGCTTCTGCTTTTTTGTACAT 8367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482313294903440